7,137 research outputs found
Nucleon and Delta masses in twisted mass chiral perturbation theory
We calculate the masses of the nucleons and deltas in twisted mass heavy
baryon chiral perturbation theory. We work to quadratic order in a power
counting scheme in which we treat the lattice spacing and the quark masses to
be of the same order. We give expressions for the mass and the mass splitting
of the nucleons and deltas both in and away from the isospin limit. We give an
argument using the chiral Lagrangian treatment that, in the strong isospin
limit, the nucleons remain degenerate and the delta multiplet breaks into two
degenerate pairs to all orders in chiral perturbation theory. We show that the
mass splitting between the degenerate pairs of the deltas first appears at
quadratic order in in the lattice spacing. We discuss the subtleties in the
effective chiral theory that arise from the inclusion of isospin breaking.Comment: 21 pages, 4 figures, version published in PR
Influence, originality and similarity in directed acyclic graphs
We introduce a framework for network analysis based on random walks on
directed acyclic graphs where the probability of passing through a given node
is the key ingredient. We illustrate its use in evaluating the mutual influence
of nodes and discovering seminal papers in a citation network. We further
introduce a new similarity metric and test it in a simple personalized
recommendation process. This metric's performance is comparable to that of
classical similarity metrics, thus further supporting the validity of our
framework.Comment: 6 pages, 4 figure
Prion-induced neurotoxicity: Possible role for cell cycle activity and DNA damage response.
Protein misfolding neurodegenerative diseases arise through neurotoxicity induced by aggregation of host proteins. These conditions include Alzheimer's disease, Huntington's disease, Parkinson's disease, motor neuron disease, tauopathies and prion diseases. Collectively, these conditions are a challenge to society because of the increasing aged population and through the real threat to human food security by animal prion diseases. It is therefore important to understand the cellular and molecular mechanisms that underlie protein misfolding-induced neurotoxicity as this will form the basis for designing strategies to alleviate their burden. Prion diseases are an important paradigm for neurodegenerative conditions in general since several of these maladies have now been shown to display prion-like phenomena. Increasingly, cell cycle activity and the DNA damage response are recognised as cellular events that participate in the neurotoxic process of various neurodegenerative diseases, and their associated animal models, which suggests they are truly involved in the pathogenic process and are not merely epiphenomena. Here we review the role of cell cycle activity and the DNA damage response in neurodegeneration associated with protein misfolding diseases, and suggest that these events contribute towards prion-induced neurotoxicity. In doing so, we highlight PrP transgenic Drosophila as a tractable model for the genetic analysis of transmissible mammalian prion disease.Supported by The NC3Rs No. NC/K000462/1 (in part).This is the final published version. It first appeared at http://dx.doi.org/10.5501/wjv.v4.i3.188
Tracing the Conversion of Gas into Stars in Young Massive Cluster Progenitors
Whilst young massive clusters (YMCs; 10 M, age
100 Myr) have been identified in significant numbers, their
progenitor gas clouds have eluded detection. Recently, four extreme molecular
clouds residing within 200 pc of the Galactic centre have been identified as
having the properties thought necessary to form YMCs. Here we utilise far-IR
continuum data from the Herschel Infrared Galactic Plane Survey (HiGAL) and
millimetre spectral line data from the Millimetre Astronomy Legacy Team 90 GHz
Survey (MALT90) to determine their global physical and kinematic structure. We
derive their masses, dust temperatures and radii and use virial analysis to
conclude that they are all likely gravitationally bound -- confirming that they
are likely YMC progenitors. We then compare the density profiles of these
clouds to those of the gas and stellar components of the Sagittarius B2 Main
and North proto-clusters and the stellar distribution of the Arches YMC. We
find that even in these clouds -- the most massive and dense quiescent clouds
in the Galaxy -- the gas is not compact enough to form an Arches-like ( =
2x10 M, R = 0.4 pc) stellar distribution. Further
dynamical processes would be required to condense the resultant population,
indicating that the mass becomes more centrally concentrated as the
(proto)-cluster evolves. These results suggest that YMC formation may proceed
hierarchically rather than through monolithic collapse.Comment: 12 pages, 8 figures, 1 table. Accepted by MNRA
The Controversies and Difficulties of Diagnosing Primary Ciliary Dyskinesia
We welcome the correspondence from Lavie and Amirav (1), highlighting the difficulties diagnosing primary ciliary dyskinesia (PCD) and the role of high-speed video analysis (HSVA). As members of the European Respiratory Society (ERS) PCD Diagnostic Task Force (2) and/or large PCD Centres, we agree that HSVA has an important role that is not recognized by the American Thoracic Society (ATS) PCD Diagnostic Guideline (3). This risks a large proportion of false-negative âmissedâ diagnoses and a sizable number of false-positive cases; we make additional important observations.</div
The effect of westerlies on East African rainfall and the associated role of tropical cyclones and the MaddenâJulian Oscillation
Variability of rainfall in East Africa has major impacts on lives and livelihoods. From floods to droughts, this variability is important on short daily timeâscales to longer decadal timeâscales, as is apparent from the devastating effects of droughts in East Africa over recent decades. Past studies have highlighted the Congo airmass in enhancing East African rainfall. Our detailed analysis of the feature shows that days with a westerly moisture flow, bringing the Congo airmass, enhance rainfall by up to 100% above the daily mean, depending on the time of year. Conversely, there is a suppression of rainfall on days with a strong easterly flow. Days with a westerly moisture flux are in a minority in all seasons but we show that long rains with more westerly days are wetter, and that during the mostârecent decade which has had more frequent droughts (associated with the âEastern African climate paradoxâ), there has been few days with such westerlies. We also investigate the influence of the MaddenâJulian Oscillation (MJO) and tropical cyclones, and their interaction with the westerly flow. We show that days of westerly moisture flux are more likely during phases 3 and 4 of the MJO and when there are one or more tropical cyclones present. In addition, tropical cyclones are more likely to form during these phases of the MJO, and more likely to be coincident with westerlies when forming to the east of Madagascar. Overall, our analysis brings together many different processes that have been discussed in the literature but not yet considered in complete combination. The results demonstrate the importance of the Congo airmass on daily to climate timeâscales, and in doing so offers useful angles of investigation for future studies into prediction of East African rainfall
Cephalosporin-3â-diazeniumdiolate NO-donor prodrug PYRRO-C3D enhances azithromycin susceptibility of non-typeable Haemophilus influenzae biofilms
The file attached to this record is the author's final peer reviewed version. The Publisher's final version can be found by following the DOI link.Objectives: PYRRO-C3D is a cephalosporin-3-diazeniumdiolate nitric oxide (NO)-donor prodrug designed to selectively deliver NO to bacterial infection sites. The objective of this study was to assess the activity of PYRRO-C3D against non-typeable Haemophilus influenzae (NTHi) biofilms and examine the role of NO in reducing biofilm-associated antibiotic tolerance.
Methods: The activity of PYRRO-C3D on in vitro NTHi biofilms was assessed through CFU enumeration and confocal microscopy. NO release measurements were performed using an ISO-NO probe. NTHi biofilms grown on primary ciliated respiratory epithelia at an air-liquid interface were used to investigate the effects of PYRRO-C3D in the presence of host tissue. Label-free LC/MS proteomic analyses were performed to identify differentially expressed proteins following NO treatment.
Results: PYRRO-C3D specifically released NO in the presence of NTHi, while no evidence of spontaneous NO release was observed when the compound was exposed to primary epithelial cells. NTHi lacking ÎČ-lactamase activity failed to trigger NO release. Treatment significantly increased the susceptibility of in vitro NTHi biofilms to azithromycin, causing a log-fold reduction in viability (p<0.05) relative to azithromycin alone. The response was more pronounced for biofilms grown on primary respiratory epithelia, where a 2-log reduction was observed (p<0.01). Label-free proteomics showed that NO increased expression of sixteen proteins involved in metabolic and transcriptional/translational functions.
Conclusions: NO release from PYRRO-C3D enhances the efficacy of azithromycin against NTHi biofilms, putatively via modulation of NTHi metabolic activity. Adjunctive therapy with NO mediated through PYRRO-C3D represents a promising approach for reducing biofilm associated antibiotic tolerance
Processes controlling the concentration of hydroperoxides at Jungfraujoch Observatory, Switzerland
International audienceAn automated, ground-based instrument was used to measure gas-phase hydroperoxides at the Jungfraujoch High Altitude Research Station as part of the Free Tropospheric EXperiment (FREETEX) during February/March 2003. A nebulising reflux concentrator sampled ambient air twice hourly, prior to on-site analysis by HPLC speciation, coupled with post-column peroxidase derivatisation and fluorescence detection. Hydrogen peroxide (H2O2) concentrations reached up to 1420 pptv over the 13-day period with a mean of 206±261 pptv (± one standard deviation). Methyl hydroperoxide (CH3OOH) reached up to 921 pptv with a mean of 76±96 pptv. No other organic hydroperoxides were detected. The lack of an explicit diurnal cycle suggests that hydroperoxide concentrations are chiefly influenced by transport processes rather than local photochemistry at this mountainous site. We find elevated concentrations of H2O2 in air masses originating from the south-west indicative of higher concentrations of HOx due to more active photochemistry. Air which has been recently polluted exhibits low H2O2 concentration due to a combination of suppression of HO2 by NOx and deposition. We also conclude that despite being at a high alpine site, the vast majority of the air observed was extensively influence by the boundary layer during our campaign (diagnosed from high CO concentrations and the high NOx to NOy ratio) resulting in deposition of H2O2 to the surface and hence reduced H2O2 concentrations. The concentrations of H2O2 sampled here are consistent with previous box modelling studies of hydroperoxides which invoked a depositional sink
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