219 research outputs found

    Thermal modulation for gas chromatography

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    A thermal modulator device for gas chromatography and associated methods. The thermal modulator device includes a recirculating fluid cooling member, an electrically conductive capillary in direct thermal contact with the cooling member, and a power supply electrically coupled to the capillary and operable for controlled resistive heating of the capillary. The capillary can include more than one separate thermally modulated sections

    Clustering of Pseudomonas aeruginosa transcriptomes from planktonic cultures, developing and mature biofilms reveals distinct expression profiles

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    BACKGROUND: Pseudomonas aeruginosa is a genetically complex bacterium which can adopt and switch between a free-living or biofilm lifestyle, a versatility that enables it to thrive in many different environments and contributes to its success as a human pathogen. RESULTS: Transcriptomes derived from growth states relevant to the lifestyle of P. aeruginosa were clustered using three different methods (K-means, K-means spectral and hierarchical clustering). The culture conditions used for this study were; biofilms incubated for 8, 14, 24 and 48 hrs, and planktonic culture (logarithmic and stationary phase). This cluster analysis revealed the existence and provided a clear illustration of distinct expression profiles present in the dataset. Moreover, it gave an insight into which genes are up-regulated in planktonic, developing biofilm and confluent biofilm states. In addition, this analysis confirmed the contribution of quorum sensing (QS) and RpoS regulated genes to the biofilm mode of growth, and enabled the identification of a 60.69 Kbp region of the genome associated with stationary phase growth (stationary phase planktonic culture and confluent biofilms). CONCLUSION: This is the first study to use clustering to separate a large P. aeruginosa microarray dataset consisting of transcriptomes obtained from diverse conditions relevant to its growth, into different expression profiles. These distinct expression profiles not only reveal novel aspects of P. aeruginosa gene expression but also provide a growth specific transcriptomic reference dataset for the research community

    Heisenberg spins on an anisotropic triangular lattice : PdCrO2 under uniaxial stress

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    Experiments at the ISIS Pulsed Neutron and Muon Source were supported by a beam time allocation from the Science and Technology Facilities Council under Expt. No. RB1820290. Financial support from the Deutsche Forschungsgemeinschaft through SFB 1143 (Project ID 247310070) and the Max Planck Society is gratefully acknowledged. RW acknowledges funding from the Engineering and Physical Sciences Research Council (EPSRC) Centre for Doctoral Training in Condensed Matter Physics (CDT-CMP), Grant No. EP/L015544/1.When Heisenberg spins interact antiferromagnetically on a triangular lattice and nearest-neighbor interactions dominate, the ground state is 120° antiferromagnetism. In this work, we probe the response of this state to lifting the triangular symmetry, through investigation of the triangular antiferromagnet PdCrO2 under uniaxial stress by neutron diffraction and resistivity measurements. The periodicity of the magnetic order is found to change rapidly with applied stress; the rate of change indicates that the magnetic anisotropy is roughly forty times the stress-induced bond length anisotropy. At low stress, the incommensuration period becomes extremely long, on the order of 1000 lattice spacings; no locking of the magnetism to commensurate periodicity is detected. Separately, the magnetic structure is found to undergo a first-order transition at a compressive stress of ∌0.4 GPa, at which the interlayer ordering switches from a double-to a single-q structure.Publisher PDFPeer reviewe

    An empirical approach to modeling ion production rates in Titan's ionosphere II: Ion production rates on the nightside

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    Ionization of neutrals by precipitating electrons and ions is the main source of Titan's nightside ionosphere. This paper has two goals: (1) characterization of the role of electron impact ionization on the nightside ionosphere for different magnetospheric conditions and (2) presentation of empirical ion production rates determined using densities measured by the Cassini Ion and Neutral Mass Spectrometer on the nightside. The ionosphere between 1000 and 1400 km is emphasized. We adopt electron fluxes measured by the Cassini Plasma Spectrometer-Electron Spectrometer and the Magnetospheric Imaging Instrument as classified by Rymer et al. (2009). The current paper follows an earlier paper (Paper I), in which we investigated sources of Titan's dayside ionosphere and demonstrated that the photoionization process is well understood. The current paper (Paper II) demonstrates that modeled and empirical ionization rates on the nightside are in agreement with an electron precipitation source above 1100 km. Ion production rate profiles appropriate for different Saturnian magnetospheric conditions, as outlined by Rymer et al., are constructed for various magnetic field topologies. Empirical production rate profiles are generated for deep nightside flybys of Titan. The results also suggest that at lower altitudes (below 1100 km) another source, such as ion precipitation, is probably needed

    An empirical approach to modeling ion production rates in Titan’s ionosphere I: Ion production rates on the dayside and globally

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    Titan's ionosphere is created when solar photons, energetic magnetospheric electrons or ions, and cosmic rays ionize the neutral atmosphere. Electron densities generated by current theoretical models are much larger than densities measured by instruments on board the Cassini orbiter. This model density overabundance must result either from overproduction or from insufficient loss of ions. This is the first of two papers that examines ion production rates in Titan's ionosphere, for the dayside and nightside ionosphere, respectively. The first (current) paper focuses on dayside ion production rates which are computed using solar ionization sources (photoionization and electron impact ionization by photoelectrons) between 1000 and 1400 km. In addition to theoretical ion production rates, empirical ion production rates are derived from CH4, CH3+, and CH4+ densities measured by the INMS (Ion Neutral Mass Spectrometer) for many Titan passes. The modeled and empirical production rate profiles from measured densities of N2+ and CH4+ are found to be in good agreement (to within 20%) for solar zenith angles between 15 and 90°. This suggests that the overabundance of electrons in theoretical models of Titan's dayside ionosphere is not due to overproduction but to insufficient ion losses

    Dynamical and magnetic field time constants for Titan's ionosphere: Empirical estimates and comparisons with Venus

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    Plasma in TitanÂŽs ionosphere flows in response to forcing from thermal pressure gradients, magnetic forces, gravity, and ion-neutral collisions. This paper takes an empirical approach to the ionospheric dynamics by using data from Cassini instruments to estimate pressures, flow speeds, and time constants on the dayside and nightside. The plasma flow speed relative to the neutral gas speed is approximately 1 m s‑1 near an altitude of 1000 km and 200 m s‑1 at 1500 km. For comparison, the thermospheric neutral wind speed is about 100 m s‑1. The ionospheric plasma is strongly coupled to the neutrals below an altitude of about 1300 km. Transport, vertical or horizontal, becomes more important than chemistry in controlling ionospheric densities above about 1200-1500 km, depending on the ion species. Empirical estimates are used to demonstrate that the structure of the ionospheric magnetic field is determined by plasma transport (including neutral wind effects) for altitudes above about 1000 km and by magnetic diffusion at lower altitudes. The paper suggests that a velocity shear layer near 1300 km could exist at some locations and could affect the structure of the magnetic field. Both Hall and polarization electric field terms in the magnetic induction equation are shown to be locally important in controlling the structure of TitanÂŽs ionospheric magnetic field. Comparisons are made between the ionospheric dynamics at Titan and at Venus.Fil: Cravens, T. E.. University of Kansas; Estados UnidosFil: Richard, M.. University of Kansas; Estados UnidosFil: Ma, Y. J.. University of California; Estados UnidosFil: Bertucci, Cesar. Consejo Nacional de InvestigaciĂłnes CientĂ­ficas y TĂ©cnicas. Oficina de CoordinaciĂłn Administrativa Ciudad Universitaria. Instituto de AstronomĂ­a y FĂ­sica del Espacio. - Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de AstronomĂ­a y FĂ­sica del Espacio; ArgentinaFil: Luhmann, J. G.. University of California; Estados UnidosFil: Ledvina, S.. University of California; Estados UnidosFil: Robertson, I. P.. University of Kansas; Estados UnidosFil: Wahlund, J. E.. Swedish Institute of Space Physics; SueciaFil: Ågren, K.. Swedish Institute of Space Physics; SueciaFil: Cui, J.. Imperial College London; Reino UnidoFil: Muller Wodarg, I.. Imperial College London; Reino UnidoFil: Waite, J. H.. Southwest Research Institute; Estados UnidosFil: Dougherty, M.. Imperial College London; Reino UnidoFil: Bell, J.. Southwest Research Institute; Estados UnidosFil: Ulusen, D.. University of California; Estados Unido

    Phyllosomata associated with large gelatinous zooplankton: hitching rides and stealing bites

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    During a zooplankton survey 350 km off the coast of Western Australia, we captured a large and robust zooid of a salp (Thetys vagina), to which six late stage larvae (phyllosomata) of the western rock lobster (Panulirus cygnus) were attached. High-throughput sequencing analyses of DNA extracts from midgut glands of the larvae confirmed that each phyllosoma had consumed mainly salp tissue ( x 1⁄4 64.5% + 15.9 of DNA reads). These results resolve long-standing conjecture whether spiny lobster phyllosomata attach to large gelatinous hosts to feed on them

    Fermi Large Area Telescope Constraints on the Gamma-ray Opacity of the Universe

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    The Extragalactic Background Light (EBL) includes photons with wavelengths from ultraviolet to infrared, which are effective at attenuating gamma rays with energy above ~10 GeV during propagation from sources at cosmological distances. This results in a redshift- and energy-dependent attenuation of the gamma-ray flux of extragalactic sources such as blazars and Gamma-Ray Bursts (GRBs). The Large Area Telescope onboard Fermi detects a sample of gamma-ray blazars with redshift up to z~3, and GRBs with redshift up to z~4.3. Using photons above 10 GeV collected by Fermi over more than one year of observations for these sources, we investigate the effect of gamma-ray flux attenuation by the EBL. We place upper limits on the gamma-ray opacity of the Universe at various energies and redshifts, and compare this with predictions from well-known EBL models. We find that an EBL intensity in the optical-ultraviolet wavelengths as great as predicted by the "baseline" model of Stecker et al. (2006) can be ruled out with high confidence.Comment: 42 pages, 12 figures, accepted version (24 Aug.2010) for publication in ApJ; Contact authors: A. Bouvier, A. Chen, S. Raino, S. Razzaque, A. Reimer, L.C. Reye

    A population of gamma-ray emitting globular clusters seen with the Fermi Large Area Telescope

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    Globular clusters with their large populations of millisecond pulsars (MSPs) are believed to be potential emitters of high-energy gamma-ray emission. Our goal is to constrain the millisecond pulsar populations in globular clusters from analysis of gamma-ray observations. We use 546 days of continuous sky-survey observations obtained with the Large Area Telescope aboard the Fermi Gamma-ray Space Telescope to study the gamma-ray emission towards 13 globular clusters. Steady point-like high-energy gamma-ray emission has been significantly detected towards 8 globular clusters. Five of them (47 Tucanae, Omega Cen, NGC 6388, Terzan 5, and M 28) show hard spectral power indices (0.7<Γ<1.4)(0.7 < \Gamma <1.4) and clear evidence for an exponential cut-off in the range 1.0-2.6 GeV, which is the characteristic signature of magnetospheric emission from MSPs. Three of them (M 62, NGC 6440 and NGC 6652) also show hard spectral indices (1.0<Γ<1.7)(1.0 < \Gamma < 1.7), however the presence of an exponential cut-off can not be unambiguously established. Three of them (Omega Cen, NGC 6388, NGC 6652) have no known radio or X-ray MSPs yet still exhibit MSP spectral properties. From the observed gamma-ray luminosities, we estimate the total number of MSPs that is expected to be present in these globular clusters. We show that our estimates of the MSP population correlate with the stellar encounter rate and we estimate 2600-4700 MSPs in Galactic globular clusters, commensurate with previous estimates. The observation of high-energy gamma-ray emission from a globular cluster thus provides a reliable independent method to assess their millisecond pulsar populations that can be used to make constraints on the original neutron star X-ray binary population, essential for understanding the importance of binary systems in slowing the inevitable core collapse of globular clusters.Comment: Accepted for publication in A&A. Corresponding authors: J. Kn\"odlseder, N. Webb, B. Pancraz
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