Observation of the photorefractive effect in a polymer

We report the first observation of the photorefractive effect in a polymeric material, the electro-optic polymer bisphenol-A-diglycidylether 4-nitro-1,2-phenylenediamine made photoconductive by doping with the hole-transport agent diethylamino-benzaldehyde diphenylhydrazone. The gratings formed exhibit dynamic writing and erasure, strong electric-field dependence, polarization anisotropy, and estimated space-charge fields up to 26 kV/cm at an applied field of 126 kV/cm. Application of similar concepts should provide a broad new class of easily fabricated photorefractive materials

Solid‐Phase Supports for Oligonucleotide Synthesis

This unit begins with a discussion of the advantages and disadvantages of oligonucleotide synthesis using solid supports. The physical and chemical properties of solid‐phase supports are discussed in terms of their suitability for oligonucleotide synthesis. In addition, the unit outlines the properties of linkers used for transient or permanent attachment of properly protected nucleosides to the derivatized support, as well as strategies for coupling nucleosides to linkers and conditions for the release of synthetic oligonucleotides from specific supports.Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/143613/1/cpnc0301.pd

Relativistic Calculation of the Meson Spectrum: a Fully Covariant Treatment Versus Standard Treatments

A large number of treatments of the meson spectrum have been tried that consider mesons as quark - anti quark bound states. Recently, we used relativistic quantum "constraint" mechanics to introduce a fully covariant treatment defined by two coupled Dirac equations. For field-theoretic interactions, this procedure functions as a "quantum mechanical transform of Bethe-Salpeter equation". Here, we test its spectral fits against those provided by an assortment of models: Wisconsin model, Iowa State model, Brayshaw model, and the popular semi-relativistic treatment of Godfrey and Isgur. We find that the fit provided by the two-body Dirac model for the entire meson spectrum competes with the best fits to partial spectra provided by the others and does so with the smallest number of interaction functions without additional cutoff parameters necessary to make other approaches numerically tractable. We discuss the distinguishing features of our model that may account for the relative overall success of its fits. Note especially that in our approach for QCD, the resulting pion mass and associated Goldstone behavior depend sensitively on the preservation of relativistic couplings that are crucial for its success when solved nonperturbatively for the analogous two-body bound-states of QED.Comment: 75 pages, 6 figures, revised content

Resistência a Septoria lycopersici em espécies de Solanum (Secção Lycopersicon) e em progênies de S. lycopersicum × S. peruvianum

Septoria leaf spot (Septoria lycopersici) is one of the major fungal diseases of tomatoes (Solanum lycopersicum) in tropical and subtropical regions with humid climates and/or in areas cultivated under sprinkler irrigation systems. Sources of resistance have been found in accessions of Solanum (section Lycopersicon) species. However, many of the described sources are not effective under Brazilian conditions. The objective of this work was to evaluate wild and cultivated Solanum (section Lycopersicon) germplasm to S. lycopersici isolates. A collection of 124 accessions was initially evaluated under greenhouse conditions. Ten accessions were highly resistance (HR), whereas 33 were classified as having a resistant (R) response to S. lycopersici isolates. Field evaluation was also conducted with a sub-set of accessions identified as either HR or R in the greenhouse experiment. This field evaluation confirmed greenhouse tests and indicated the presence of some potential sources of rate-reducing resistance. One highly resistant and eight resistant S. habrochaites accessions were identified as being resistant under both conditions, confirming that this wild species is one of the most promising sources of resistance to S. lycopersici. Five new sources with high levels of resistance were found in S. peruvianum accessions (PI-306811, CNPH-1036, LA-1910, LA-1984 and LA-2744). One accession derived from an interspecific cross between S. lycopersicum and S. peruvianum was also found to be highly resistant and might be useful to introgress resistance factors from this wild species into cultivated tomato germplasm. However, additional breeding efforts will be necessary to introgress into the cultivated tomato the resistance factors identified in other S. peruvianum accessions due to the presence of natural crossing barriers between the two species.A mancha-de-septória (Septoria lycopersici) é importante doença fúngica do tomateiro (Solanum lycopersicum) em áreas tropicais e subtropicais com alta umidade ou quando esta hortaliça é cultivada sob irrigação por aspersão. Fontes de resistência têm sido encontradas em germoplasma de Solanum (secção Lycopersicon). No entanto, muitas das fontes descritas não funcionam nas condições brasileiras. Avaliou-se uma coleção de germoplasma de tomate cultivado e selvagem (Solanum secção Lycopersicon) visando identificar novas fontes de elevada resistência. Uma coleção de 124 acessos foi inicialmente avaliada sob condições de casa de vegetação. Somente dez acessos foram classificados como altamente resistentes e 33 foram classificados como resistentes. Um ensaio de campo foi também conduzido com um subconjunto de acessos promissores identificados no primeiro experimento. Foi confirmada a resposta da maioria dos acessos avaliados em casa de vegetação e indicou a presença de fontes de resistência capazes de reduzir a taxa de progresso da doença. Um acesso de S. habrochaites com elevada resistência e oito acessos resistentes foram identificados, confirmando que esta espécie representa uma das mais promissoras fontes de genes de resistência a S. lycopersici. Cinco novas fontes com elevados níveis de resistência foram identificadas em acessos da espécie S. peruvianum (PI-306811, CNPH-1036, LA-1910, LA-1984 e LA-2744). Um acesso, derivado de cruzamento interespecífico entre S. lycopersicum e S. peruvianum também mostrou-se altamente resistente e poderá ser útil na introgressão deste(s) gene(s) em germoplasma de tomateiro cultivado. No entanto, esforços adicionais de melhoramento serão necessários para transferir para o tomateiro cultivado os fatores de resistência identificados em outros acessos de S. peruvianum, uma vez que existem barreiras naturais de cruzamentos entre estas duas espécies

A case series of familial ARID1B variants illustrating variable expression and suggestions to update the ACMG criteria

ARID1B is one of the most frequently mutated genes in intellectual disability (~1%). Most variants are readily classified, since they are de novo and are predicted to lead to loss of function, and therefore classified as pathogenic according to the American College of Medical Genetics and Genomics (ACMG) guidelines for the interpretation of sequence variants. However, familial loss-of-function variants can also occur and can be challenging to interpret. Such variants may be pathogenic with variable expression, causing only a mild phenotype in a parent. Alternatively, since some regions of the ARID1B gene seem to be lacking pathogenic variants, loss-of-function variants in those regions may not lead to ARID1B haploinsufficiency and may therefore be benign. We describe 12 families with potential loss-of-function variants, which were either familial or with unknown inheritance and were in regions where pathogenic variants have not been described or are otherwise challenging to interpret. We performed detailed clinical and DNA methylation studies, which allowed us to confidently classify most variants. In five families we observed transmission of pathogenic variants, confirming their highly variable expression. Our findings provide further evidence for an alternative translational start site and we suggest updates for the ACMG guidelines for the interpretation of sequence variants to incorporate DNA methylation studies and facial analyses

PREDICTING THE SUMMER TEMPERATURE OF SMALL STREAMS IN SOUTHWESTERN WISCONSIN 1

One of the biggest challenges in managing cold water streams in the Midwest is understanding how stream temperature is controlled by the complex interactions among meteorologic processes, channel geometry, and ground water inflow. Inflow of cold ground water, shade provided by riparian vegetation, and channel width are the most important factors controlling summer stream temperatures. A simple screening model was used to quantitatively evaluate the importance of these factors and guide management decisions. The model uses an analytical solution to the heat transport equation to predict steady-state temperature throughout a stream reach. The model matches field data from four streams in southwestern Wisconsin quite well (typically within 1°C) and helps explain the observed warming and cooling trends along each stream reach. The distribution of ground water inflow throughout a stream reach has an important influence on stream temperature, and springs are especially effective at providing thermal refuge for fish. Although simple, this model provides insight into the importance of ground water and the impact different management strategies, such as planting trees to increase shade, may have on summer stream temperature.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/74032/1/j.1752-1688.2005.tb03714.x.pd

Heavy Quarks and Heavy Quarkonia as Tests of Thermalization

We present here a brief summary of new results on heavy quarks and heavy quarkonia from the PHENIX experiment as presented at the "Quark Gluon Plasma Thermalization" Workshop in Vienna, Austria in August 2005, directly following the International Quark Matter Conference in Hungary.Comment: 8 pages, 5 figures, Quark Gluon Plasma Thermalization Workshop (Vienna August 2005) Proceeding

Detector Description and Performance for the First Coincidence Observations between LIGO and GEO

For 17 days in August and September 2002, the LIGO and GEO interferometer gravitational wave detectors were operated in coincidence to produce their first data for scientific analysis. Although the detectors were still far from their design sensitivity levels, the data can be used to place better upper limits on the flux of gravitational waves incident on the earth than previous direct measurements. This paper describes the instruments and the data in some detail, as a companion to analysis papers based on the first data.Comment: 41 pages, 9 figures 17 Sept 03: author list amended, minor editorial change