A generic length-scale equation for geophysical turbulence models

A generalization of a class of differential length-scale equations typically used in second-order turbulence models for oceanic flows is suggested. Commonly used models, like the k-ε model and the Mellor-Yamada model, can be recovered as special cases of this generic model, and thus can be rationally compared. In addition, a method is proposed that yields a generalized framework for the calibration of the most frequently used class of differential length-scale equations. The generic model, calibrated with this method, exhibits a greater range of applicability than any of the traditional models. Stratified flows, plane mixing layers, and turbulence introduced by breaking surface waves are considered besides some classical test cases

Validation and intercomparison of two vertical-mixing schemes in the Mediterranean Sea

International audienceIn this study, two types of vertical turbulence closure models are tested in the Mediterranean Sea in a one-dimensional configuration. The numerical experiments are performed at different locations in the Mediterranean for which the year 2004 is simulated. The model results are then compared and validated with in-situ temperature observations. For the model simulations, initial profiles of temperature and salinity come from the ARGO (Array for Real-time Geostrophic Oceanography) profiles. The surface forcing (momentum, heat) is calculated from bulk formulae using 6-hourly atmospheric data from the European Center for Medium Range Weather Forecast (ECMWF). The vertical mixing schemes tested in this study are a second-order statistical model (k-?) and the non-local K-profile parameterization (KPP). Both schemes yield similar results in terms of reproducing the water column dynamics. A major source of discrepancy between model and observations comes from the uncertainties in the atmospheric forcing parameterization. At this point, net shortwave radiation data from NCEP atmospheric reanalysis has been used obtaining a more realistic Sea Surface Temperature (SST) compared with satellite observations for the summer months

Associations between Cognition, Gender and Monocyte Activation among HIV Infected Individuals in Nigeria.

The potential role of gender in the occurrence of HIV-related neurocognitive impairment (NCI) and associations with markers of HIV-related immune activity has not been previously examined. In this study 149 antiretroviral-naïve seropositive subjects in Nigeria (SP, 92 women and 57 men) and 58 seronegative (SN, 38 women and 20 men) were administered neuropsychological testing that assessed 7 ability domains. From the neuropsychological test scores was calculated a global deficit score (GDS), a measure of overall NCI. Percentages of circulating monocytes and plasma HIV RNA, soluble CD163 and soluble CD14 levels were also assessed. HIV SP women were found to be younger, more educated and had higher CD4+ T cell counts and borderline higher viral load measures than SP men. On the neuropsychological testing, SP women were more impaired in speed of information processing and verbal fluency and had a higher mean GDS than SN women. Compared to SP men, SP women were also more impaired in speed of information processing and verbal fluency as well as on tests of learning and memory. Numbers of circulating monocytes and plasma sCD14 and sCD163 levels were significantly higher for all SP versus all SN individuals and were also higher for SP women and for SP men versus their SN counterparts. Among SP women, soluble CD14 levels were slightly higher than for SP men, and SP women had higher viral load measurements and were more likely to have detectable virus than SP men. Higher sCD14 levels among SP women correlated with more severe global impairment, and higher viral load measurements correlated with higher monocyte numbers and sCD14 and sCD14 levels, associations that were not observed for SP men. These studies suggest that the risk of developing NCI differ for HIV infected women and men in Nigeria and, for women, may be linked to effects from higher plasma levels of HIV driving activation of circulating monocytes

Baroclinic Interleaving Instability: A Second-Moment Closure Approach

Interleaving motions on a wide, baroclinic front are modeled using a second-moment closure to represent unresolved fluxes by turbulence and salt fingering. A linear perturbation analysis reveals two broad classes of unstable modes. First are scale-selective modes comparable with interleaving as observed in oceanic fronts. These correspond well with observations in some respects but grow by a very different mechanism, which ought to be easily distinguished in hydrographic profiles. The second mode type is the so-called ultraviolet catastrophe, which is expected to lead to steppy profiles even in the absence of interleaving. Both modes are driven by positive feedbacks between interleaving and the underlying small-scale mixing processes. Contrary to expectations, use of the second-moment closure in place of earlier empirical mixing models does not lead to improved agreement with observations.Keywords: Mixing, Diapycnal mixing, Instabilit

Energy- and flux-budget (EFB) turbulence closure model for the stably stratified flows. Part I: Steady-state, homogeneous regimes

We propose a new turbulence closure model based on the budget equations for the key second moments: turbulent kinetic and potential energies: TKE and TPE (comprising the turbulent total energy: TTE = TKE + TPE) and vertical turbulent fluxes of momentum and buoyancy (proportional to potential temperature). Besides the concept of TTE, we take into account the non-gradient correction to the traditional buoyancy flux formulation. The proposed model grants the existence of turbulence at any gradient Richardson number, Ri. Instead of its critical value separating - as usually assumed - the turbulent and the laminar regimes, it reveals a transition interval, 0.1< Ri <1, which separates two regimes of essentially different nature but both turbulent: strong turbulence at Ri<<1; and weak turbulence, capable of transporting momentum but much less efficient in transporting heat, at Ri>1. Predictions from this model are consistent with available data from atmospheric and lab experiments, direct numerical simulation (DNS) and large-eddy simulation (LES).Comment: 40 pages, 6 figures, Boundary-layer Meteorology, resubmitted, revised versio

The Baltic Sea Tracer Release Experiment. Part I: Mixing rates

In this study, results from the Baltic Sea Tracer Release Experiment (BATRE) are described, in which deep water mixing rates and mixing processes in the central Baltic Sea were investigated. In September 2007, an inert tracer gas (CF3SF5) was injected at approximately 200 m depth in the Gotland Basin, and the subsequent spreading of the tracer was observed during six surveys until February 2009. These data describe the diapycnal and lateral mixing during a stagnation period without any significant deep water renewal due to inflow events. As one of the main results, vertical mixing rates were found to dramatically increase after the tracer had reached the lateral boundaries of the basin, suggesting boundary mixing as the key process for basin-scale vertical mixing. Basin-scale vertical diffusivities were of the order of 10−5 m2 s−1 (about 1 order of magnitude larger than interior diffusivities) with evidence for a seasonal and vertical variability. In contrast to tracer experiments in the open ocean, the basin geometry (hypsography) was found to have a crucial impact on the vertical tracer spreading. The e-folding time scale for deep water renewal due to mixing was slightly less than 2 years, the time scale for the lateral homogenization of the tracer patch was of the order of a few months. Key Points: Mixing rates in the Gotland Basin are dominated by boundary mixing processes; The time scale for Gotland Basin deep water renewal is approximately 2 years; Mixing rates determined from the tracer CF3SF