Foraging ecology and habitat use of the northern diamondback terrapin (Malaclemys terrapin terrapin) in southern Chesapeake Bay

The northern diamondback terrapin (Malaclemys terrapin ) is the only estuarine turtle residing along western Atlantic and Gulf of Mexico coasts of North America. Through predation, terrapins may be a key species in coastal marine habitats by exerting top-down control on marsh invertebrates, and thereby help to maintain healthy marshes. Despite the terrapin\u27s ecological importance, there has not been a thorough study of terrapin foraging ecology and movements in lower Chesapeake Bay. In this dissertation, the research focused on the foraging habits of diamondback terrapins and their effects within salt marsh and seagrass habitats of lower Chesapeake Bay. I provided detailed analysis of the diet of diamondback terrapins captured from both salt marsh and seagrass habitats that showed preferred foraging in seagrass beds when present, as well as prey differentiation by terrapin size, i.e., small vs. large terrapins. Three general patterns in dietary overlap based on terrapin size were common for M. terrapin. By habitat, there was substantial overlap in prey choice, though further analyses determined selectivity for barnacles Balanus spp. by small terrapins in seagrass beds. Small terrapins from marsh-mudflat habitats consumed more periwinkles than large terrapins from marshes or all terrapins from marsh-SAV habitats. The size of ingested periwinkles was related to terrapin size with snails ingested by mature females presenting a bimodal distribution. Two mesocosm prey choice experiments showed that terrapins had a preference for juvenile blue crabs (Callinectes sapidus) over periwinkles and mottled dog whelks (Nassarius vibex). A third revealed terrapins were less successful in finding and consuming blue crabs with increasing percent cover of vegetation. An acoustic telemetry study confirmed that small terrapins, which included all males and juvenile females, had better-defined home ranges than adult females and stayed mostly in shallow near-shore water in seagrass beds of lower York River, whereas large females entered these areas on flood and high tides. A logistic regression model predicted that small terrapins were less likely to move out of an area than large females. Males made infrequent, long distances trips within the study area not associated with mating. Both genders and size classes also frequently moved between non-connected Zostera marina beds in the study area. This research provided the first field evidence that terrapins ingested viable eelgrass seeds incidental to consuming Z. marina epifauna. A second logistic regression model revealed that small terrapins were more likely to consume seeds than large terrapins. The diamondback terrapin is considered a species of concern in Virginia, but it has minimal protection with little enforcement. This dissertation provides empirical evidence supporting the diamondback terrapin\u27s ecological importance within Chesapeake Bay that can be incorporated into conservation strategies to promote recovery and protection of the species within Virginia

Cetuximab induced cutaneous rash: Does it affect psychological well-being in colorectal cancer patients?

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Changes of palaeoenvironmental conditions recorded in Late Devonian reef systems from the Canning Basin, Western Australia: A biomarker and stable isotope approach

Although the Late Devonian extinctions were amongst the largest mass extinction events in the Phanerozoic, the causes, nature and timing of these events remain poorly restrained. In addition to the most pronounced biodiversity loss at the Frasnian–Famennian (F–F) boundary and the end Famennian, there were also less extensively studied extinction pulses in the Middle to Late Givetian and the Frasnian. Here we used a combination of palynological, elemental, molecular and stable isotope analyses to investigate a sedimentary record of reef-systems from this time period in the Canning Basin, Western Australia. The acquired data generally showed distinct variations between sediments from (i) the time around the Givetian–Frasnian (G–F) boundary and (ii) later in the Frasnian and indicated a distinct interval of biotic stress, particularly for reef-builders, in the older sediments. Alterations of pristane/phytane ratios, gammacerane indices, Chlorobi biomarkers, δDkerogen and chroman ratios describe the change from a restricted marine palaeoenvironment with an anoxic/euxinic hypolimnion towards a presumably open marine setting with a vertically mixed oxic to suboxic water column. Simultaneous excursions in δ13C profiles of carbonates, organic matter (OM) and hydrocarbons in the older sediments reflect the stratification-induced enhancement of OM-recycling by sulfate reducing bacteria. Alterations in sterane distributions and elevated abundances of methyltrimethyltridecylchromans (MTTCs) and perylene indicate an increased terrigenous nutrient input via riverine influx, which would have promoted stratification, phytoplankton blooms and the development of lower water column anoxia.The detected palaeoenvironmental conditions around the G–F boundary may reflect a local or global extinction event. Our data furthermore suggest a contribution of the higher plant-expansion and photic zone euxinia to the Late Devonian extinctions, consistent with previous hypotheses. Furthermore, this work might contribute to the understanding of variations in Devonian reef margin and platform-top architecture, relevant for petroleum exploration and development in the global Devonian hydrocarbon resources

Comparison of GC‐MS, HPLC‐MS and SIFT‐MS in conjunction with multivariate classification for the diagnosis of Crohn’s disease in urine

The developed world has seen an alarming increase in the incidence of gastrointestinal diseases, among the most common of which is Crohn’s disease (CD) in the young. The current “gold standard” techniques for diagnosis are often costly, time consuming, inefficient, invasive, and offer poor sensitivities and specificities. This paper compares the performances of three hyphenated instrumental techniques that have been suggested as rapid methods for the non‐invasive diagnosis of CD from urine. These techniques are gas chromatography‐mass spectrometry (GC‐MS), high performance liquid chromatography‐mass spectrometry (HPLC‐MS) and selected ion flow tube mass spectrometry (SIFT‐MS). Each of these techniques is followed by multivariate classification to provide a diagnosis based on the acquired data. The most promising results for potentially diagnosing CD was via HPLC‐MS. An overall classification accuracy of 73% (74% specificity; 73% sensitivity) was achieved for differentiating CD from healthy controls, statistically significant at 95% confidence

Genetic dissection of fruit quality traits in the octoploid cultivated strawberry highlights the role of homoeo-QTL in their control

Fruit quality traits are major breeding targets in the Rosaceae. Several of the major Rosaceae species are current or ancient polyploids. To dissect the inheritance of fruit quality traits in polyploid fleshy fruit species, we used a cultivated strawberry segregating population comprising a 213 full-sibling F1 progeny from a cross between the variety ‘Capitola’ and the genotype ‘CF1116’. We previously developed the most comprehensive strawberry linkage map, which displays seven homoeology groups (HG), including each four homoeology linkage groups (Genetics 179:2045–2060, 2008). The map was used to identify quantitative trait loci (QTL) for 19 fruit traits related to fruit development, texture, colour, anthocyanin, sugar and organic acid contents. Analyses were carried out over two or three successive years on field-grown plants. QTL were detected for all the analysed traits. Because strawberry is an octopolyploid species, QTL controlling a given trait and located at orthologous positions on different homoeologous linkage groups within one HG are considered as homoeo-QTL. We found that, for various traits, about one-fourth of QTL were putative homoeo-QTL and were localised on two linkage groups. Several homoeo-QTL could be detected the same year, suggesting that several copies of the gene underlying the QTL are functional. The detection of some other homoeo-QTL was year-dependent. Therefore, changes in allelic expression could take place in response to environmental changes. We believe that, in strawberry as in other polyploid fruit species, the mechanisms unravelled in the present study may play a crucial role in the variations of fruit quality

Elevated circulating levels of succinate in human obesity are linked to specific gut microbiota

Gut microbiota-related metabolites are potential clinical biomarkers for cardiovascular disease (CVD). Circulating succinate, a metabolite produced by both microbiota and the host, is increased in hypertension, ischemic heart disease, and type 2 diabetes. We aimed to analyze systemic levels of succinate in obesity, a major risk factor for CVD, and its relationship with gut microbiome. We explored the association of circulating succinate with specific metagenomic signatures in cross-sectional and prospective cohorts of Caucasian Spanish subjects. Obesity was associated with elevated levels of circulating succinate concomitant with impaired glucose metabolism. This increase was associated with specific changes in gut microbiota related to succinate metabolism: a higher relative abundance of succinate-producing Prevotellaceae (P) and Veillonellaceae (V), and a lower relative abundance of succinate-consuming Odoribacteraceae (O) and Clostridaceae (C) in obese individuals, with the (P + V/O + C) ratio being a main determinant of plasma succinate. Weight loss intervention decreased (P + V/O + C) ratio coincident with the reduction in circulating succinate. In the spontaneous evolution after good dietary advice, alterations in circulating succinate levels were linked to specific metagenomic signatures associated with carbohydrate metabolism and energy production with independence of body weight change. Our data support the importance of microbe-microbe interactions for the metabolite signature of gut microbiome and uncover succinate as a potential microbiota-derived metabolite related to CVD risk

Evidence of Eelgrass (Zostera marina) Seed Dispersal by Northern Diamondback Terrapin (Malaclemys terrapin terrapin) in Lower Chesapeake Bay

Abstract The initial discovery in May 2009 of eelgrass (Zostera marina) seeds in fecal samples of wild-caught northern diamondback terrapins (Malaclemys terrapin terrapin) was the first field evidence of eelgrass seed ingestion in this species. This finding suggested the potential of terrapins as seed dispersers in eelgrass beds, which we sampled for two additional years (2010 and 2011). Seeds were only found in feces of terrapins captured prior to June 8 in all three years, coinciding with eelgrass seed maturation and release. Numbers of seeds in terrapin feces varied annually and decreased greatly in 2011 after an eelgrass die off in late 2010. The condition of seeds in terrapin feces was viable-mature, germinated, damaged, or immature. Of terrapins captured during time of seed release, 97% were males and juvenile females, both of which had head widths , 30 mm. The fraction of individuals with ingested seeds was 33% for males, 35% for small females, and only 6% for large (mature) females. Probability of seed ingestion decreased exponentially with increasing terrapin head width; only males and small females (head width ,30 mm) were likely to be vectors of seed dispersal. The characteristic that diamondback terrapins have well-defined home ranges allowed us to estimate the number of terrapins potentially dispersing eelgrass seeds annually. In seagrass beds of the Goodwin Islands region (lower York River, Virginia), there were 559 to 799 terrapins, which could disperse between 1,341 and 1,677 eelgrass seeds annually. These would represent a small proportion of total seed production within a single seagrass bed. However, based on probable home range distances, terrapins can easily traverse eelgrass meadow boundaries, thereby dispersing seeds beyond the bed of origin. Given the relatively short dispersion distance of eelgrass seeds, the diamondback terrapin may be a major source of inter-bed seed dispersal and genetic diversity