169 research outputs found
The structural basis of differential DNA sequence recognition by restriction–modification controller proteins
Modelling the Sound of a Golf Ball Impacting a Titanium Plate
A model was developed to predict the sound of a ball impacting a USGA CoR plate, as a first step towards simulating the acoustics of a ball/driver impact. A ball was dropped from 2.5 m onto a free-free plate with the impact sound recorded with a microphone. The experiment was replicated in Ansys/LS-DYNA, with both the exact Boundary Element Method and the Rayleigh method applied to predict the sound. The Rayleigh method predicted lower acoustic pressure than the Boundary Element Method, and was less accurate at predicting relative amplitudes of the frequency
spectrum. The models under-predicted decay time, although, increasing mesh density improved agreement with the experiment. Further work should look to improve agreement between model and experiment for decay time, while investigating the effect of impact speed for a range of
plate thicknesses
Transcription regulation of restriction-modification system Esp1396I
The convergently transcribed restriction (R) and methylase (M) genes of the Restriction–Modification system Esp1396I are tightly regulated by a controller (C) protein that forms part of the CR operon. We have mapped the transcriptional start sites from each promoter and examined the regulatory role of C.Esp1396I in vivo and in vitro. C-protein binding at the CR and M promoters was analyzed by DNA footprinting and a range of biophysical techniques. The distal and proximal C-protein binding sites at the CR promoter are responsible for activation and repression, respectively. In contrast, a C-protein dimer binds to a single site at the M-promoter to repress the gene, with an affinity much greater than for the CR promoter. Thus, during establishment of the system in a naïve host, the activity of the M promoter is turned off early, preventing excessive synthesis of methylase. Mutational analysis of promoter binding sites reveals that the tetranucleotide inverted repeats long believed to be important for C-protein binding to DNA are less significant than previously thought. Instead, symmetry-related elements outside of these repeats appear to be critical for the interaction and are discussed in terms of the recent crystal structure of C.Esp139I bound to the CR promoter
Transcription regulation of restriction-modification system Esp1396I
The convergently transcribed restriction (R) and methylase (M) genes of the Restriction–Modification system Esp1396I are tightly regulated by a controller (C) protein that forms part of the CR operon. We have mapped the transcriptional start sites from each promoter and examined the regulatory role of C.Esp1396I in vivo and in vitro. C-protein binding at the CR and M promoters was analyzed by DNA footprinting and a range of biophysical techniques. The distal and proximal C-protein binding sites at the CR promoter are responsible for activation and repression, respectively. In contrast, a C-protein dimer binds to a single site at the M-promoter to repress the gene, with an affinity much greater than for the CR promoter. Thus, during establishment of the system in a naïve host, the activity of the M promoter is turned off early, preventing excessive synthesis of methylase. Mutational analysis of promoter binding sites reveals that the tetranucleotide inverted repeats long believed to be important for C-protein binding to DNA are less significant than previously thought. Instead, symmetry-related elements outside of these repeats appear to be critical for the interaction and are discussed in terms of the recent crystal structure of C.Esp139I bound to the CR promoter
Plasma Wakefield Accelerator Research 2019 - 2040 : a community-driven UK roadmap compiled by the Plasma Wakefield Accelerator Steering Committee (PWASC)
The acceleration gradients generated in a laser- or beam-driven plasma wakefield accelerator are typically three orders of magnitude greater than those produced by a conventional accelerator, and hence plasma accelerators can open a route to a new generation of very compact machines. In addition, plasma-based accelerators can generate beams with unique properties, such as tens of kiloamp peak currents, attosecond bunch duration, ultrahigh brightness and intrinsic particle beam-laser pulse synchronization. In this roadmap we review the status of plasma accelerator research in the UK. We outline potential applications, describe the research and development required to enable those applications, and discuss synergies with related areas of research. We also set-out the resources required to realise these ambitions and provide a timeline for advances in the key areas
Modeling neurocognitive and neurobiological recovery in addiction
This book focuses on "what to know" and "how to apply" information, prioritizing novel principles and delineating cutting-edge assessment, phenotyping and treatment tools
International Veterinary Epilepsy Task Force consensus proposal: Medical treatment of canine epilepsy in Europe
In Europe, the number of antiepileptic drugs (AEDs) licensed for dogs has grown considerably over the last years. Nevertheless, the same questions remain, which include, 1) when to start treatment, 2) which drug is best used initially, 3) which adjunctive AED can be advised if treatment with the initial drug is unsatisfactory, and 4) when treatment changes should be considered. In this consensus proposal, an overview is given on the aim of AED treatment, when to start long-term treatment in canine epilepsy and which veterinary AEDs are currently in use for dogs. The consensus proposal for drug treatment protocols, 1) is based on current published evidence-based literature, 2) considers the current legal framework of the cascade regulation for the prescription of veterinary drugs in Europe, and 3) reflects the authors’ experience. With this paper it is aimed to provide a consensus for the management of canine idiopathic epilepsy. Furthermore, for the management of structural epilepsy AEDs are inevitable in addition to treating the underlying cause, if possible
Hematopoietic Stem Cells Contribute to Lymphatic Endothelium
Although the lymphatic system arises as an extension of venous vessels in the embryo, little is known about the role of circulating progenitors in the maintenance or development of lymphatic endothelium. Here, we investigated whether hematopoietic stem cells (HSCs) have the potential to give rise to lymphatic endothelial cells (LEC). mice resulted in the incorporation of donor-derived LEC into the lymphatic vessels of spontaneously arising intestinal tumors.Our results indicate that HSCs can contribute to normal and tumor associated lymphatic endothelium. These findings suggest that the modification of HSCs may be a novel approach for targeting tumor metastasis and attenuating diseases of the lymphatic system
Effect of time-temperature binomial in obtaining biochemical oxygen demand of different wastewaters
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