1,327 research outputs found
Heart enhancers with deeply conserved regulatory activity are established early in zebrafish development.
During the phylotypic period, embryos from different genera show similar gene expression patterns, implying common regulatory mechanisms. Here we set out to identify enhancers involved in the initial events of cardiogenesis, which occurs during the phylotypic period. We isolate early cardiac progenitor cells from zebrafish embryos and characterize 3838 open chromatin regions specific to this cell population. Of these regions, 162 overlap with conserved non-coding elements (CNEs) that also map to open chromatin regions in human. Most of the zebrafish conserved open chromatin elements tested drive gene expression in the developing heart. Despite modest sequence identity, human orthologous open chromatin regions recapitulate the spatial temporal expression patterns of the zebrafish sequence, potentially providing a basis for phylotypic gene expression patterns. Genome-wide, we discover 5598 zebrafish-human conserved open chromatin regions, suggesting that a diverse repertoire of ancient enhancers is established prior to organogenesis and the phylotypic period
protocol for a hospital-based registry study
Introduction Obstructive sleep apnoea (OSA), the most common type of sleep-
disordered breathing, is associated with significant immediate and long-term
morbidity, including fragmented sleep and impaired daytime functioning, as
well as more severe consequences, such as hypertension, impaired cognitive
function and reduced quality of life. Perioperatively, OSA occurs frequently
as a consequence of pre-existing vulnerability, surgery and drug effects. The
impact of OSA on postoperative respiratory complications (PRCs) needs to be
better characterised. As OSA is associated with significant comorbidities,
such as obesity, pulmonary hypertension, myocardial infarction and stroke, it
is unclear whether OSA or its comorbidities are the mechanism of PRCs. This
project aims to (1) develop a novel prediction score identifying surgical
patients at high risk of OSA, (2) evaluate the association of OSA risk on PRCs
and (3) evaluate if pharmacological agents used during surgery modify this
association. Methods Retrospective cohort study using hospital-based
electronic patient data and perioperative data on medications administered and
vital signs. We will use data from Partners Healthcare clinical databases,
Boston, Massachusetts. First, a prediction model for OSA will be developed
using OSA diagnostic codes and polysomnography procedural codes as the
reference standard, and will be validated by medical record review. Results of
the prediction model will be used to classify patients in the database as
high, medium or low risk of OSA, and we will investigate the effect of OSA on
risk of PRCs. Finally, we will test whether the effect of OSA on PRCs is
modified by the use of intraoperative pharmacological agents known to increase
upper airway instability, including neuromuscular blockade, neostigmine,
opioids, anaesthetics and sedatives. Ethics and dissemination The Partners
Human Research Committee approved this study (protocol number: 2014P000218).
Study results will be made available in the form of manuscripts for
publication and presentations at national and international meetings
Development and validation of a Score for Preoperative Prediction of Obstructive Sleep Apnea (SPOSA) and its perioperative outcomes
Background Postoperative respiratory complications (PRCs) are associated with
significant morbidity, mortality, and hospital costs. Obstructive sleep apnea
(OSA), often undiagnosed in the surgical population, may be a contributing
factor. Thus, we aimed to develop and validate a score for preoperative
prediction of OSA (SPOSA) based on data available in electronic medical
records preoperatively. Methods OSA was defined as the occurrence of an OSA
diagnostic code preceded by a polysomnography procedure. A priori defined
variables were analyzed by multivariable logistic regression analysis to
develop our score. Score validity was assessed by investigating the score’s
ability to predict non-invasive ventilation. We then assessed the effect of
high OSA risk, as defined by SPOSA, on PRCs within seven postoperative days
and in-hospital mortality. Results A total of 108,781 surgical patients at
Partners HealthCare hospitals (2007–2014) were studied. Predictors of OSA
included BMI >25 kg*m−2 and comorbidities, including pulmonary hypertension,
hypertension, and diabetes. The score yielded an area under the curve of 0.82.
Non-invasive ventilation was significantly associated with high OSA risk (OR
1.44, 95% CI 1.22–1.69). Using a dichotomized endpoint, 26,968 (24.8%)
patients were identified as high risk for OSA and 7.9% of these patients
experienced PRCs. OSA risk was significantly associated with PRCs (OR 1.30,
95% CI 1.19–1.43). Conclusion SPOSA identifies patients at high risk for OSA
using electronic medical record-derived data. High risk of OSA is associated
with the occurrence of PRCs
Melancholia and conviviality in modern literary Scots : Sanghas, Sengas and Shairs
This paper considers the visions of Scottish identity projected in twenty-first century, post-devolution Scots literature, and seeks to read them against Paul Gilroy’s Postcolonial Melancholia (2005) which examines the protean identities of post-imperial Britain. Gilroy looks particularly at social and artistic manifestations of racial and cultural inequality, although conceding that there is also room for a ‘postcolonial conviviality’ that celebrates diversity. His critique of this ‘Britain’ is, however, selectively constructed, making only passing reference to the constituent nations of the United Kingdom, and no space is devoted to an evaluation of post-colonial Wales, Scotland or Northern Ireland. As yet, no comparable analysis is forthcoming for these ‘home nations’, so this paper attempts to outline the ways in which Scottish—and particularly Scots—literature may provide relevant comparable cultural commentary. Focus is given here to literature written in Scots because the choice to write in Scots is strongly politically motivated and speaks immediately to the question of cultural inequality and loss. Specific attention is paid to Matthew Fitt’s But n Ben A-Go-Go (2000), Suhayl Saadi’s Psychoraag (2004), and Anne Donovan’s Buddha Da (2003), which various engage with questions of personal and national identity as their main characters take part in their personal journeys
Hazards Induced by Breach of Liquid Rocket Fuel Tanks: Conditions and Risks of Cryogenic Liquid Hydrogen-Oxygen Mixture Explosions
We analyze the data of purposeful rupture experiments with LOx and LH2 tanks, the Hydrogen-Oxygen Vertical Impact (HOVI) tests that were performed to clarify the ignition mechanisms, the explosive power of cryogenic H2/Ox mixtures under different conditions, and to elucidate the puzzling source of the initial formation of flames near the intertank section during the Challenger disaster. We carry out a physics-based analysis of general explosions scenarios for cryogenic gaseous H2/Ox mixtures and determine their realizability conditions, using the well-established simplified models from the detonation and deflagration theory. We study the features of aerosol H2/Ox mixture combustion and show, in particular, that aerosols intensify the deflagration flames and can induce detonation for any ignition mechanism. We propose a cavitation-induced mechanism of self-ignition of cryogenic H2/Ox mixtures that may be realized when gaseous H2 and Ox flows are mixed with a liquid Ox turbulent stream, as occurred in all HOVI tests. We present an overview of the HOVI tests to make conclusion on the risk of strong explosions in possible liquid rocket incidents and provide a semi-quantitative interpretation of the HOVI data based on aerosol combustion. We uncover the most dangerous situations and discuss the foreseeable risks which can arise in space missions and lead to tragic outcomes. Our analysis relates to only unconfined mixtures that are likely to arise as a result of liquid propellant space vehicle incidents
Markets and marketing research on poverty and its alleviation: Summarizing an evolving logic toward human capabilities, well-being goals and transformation
Marketing practitioners and business scholars now view some of the world’s poorest communities as profitable growth markets. Hence a market-based approach to poverty alleviation has gathered momentum. This article traces the evolution of such a market-based approach over four decades and highlights a gradual trend away from a deficit-reduction approach (focused on constraints and justice) towards an opportunity-expansion approach (focused on capabilities and well-being). This trend is summarized in an analytical framework of human capabilities, well-being goals and transformative impact evolved from the literature. The framework is then used to analyse the practice of sanitation marketing, which has emerged as a key method in one of the highest priority domains in international development discourse – sanitation. The article concludes with a discussion of how contemporary work can further take forward the key tenets of the framework and guide the development of ‘good markets’ for the poor
Ecology: a prerequisite for malaria elimination and eradication
* Existing front-line vector control measures, such as insecticide-treated nets and residual sprays, cannot break the transmission cycle of Plasmodium falciparum in the most intensely endemic parts of Africa and the Pacific
* The goal of malaria eradication will require urgent strategic investment into understanding the ecology and evolution of the mosquito vectors that transmit malaria
* Priority areas will include understanding aspects of the mosquito life cycle beyond the blood feeding processes which directly mediate malaria transmission
* Global commitment to malaria eradication necessitates a corresponding long-term commitment to vector ecolog
Using a New Odour-Baited Device to Explore Options for Luring and Killing Outdoor-Biting Malaria Vectors: A Report on Design and Field Evaluation of the Mosquito Landing Box.
Mosquitoes that bite people outdoors can sustain malaria transmission even where effective indoor interventions such as bednets or indoor residual spraying are already widely used. Outdoor tools may therefore complement current indoor measures and improve control. We developed and evaluated a prototype mosquito control device, the 'Mosquito Landing Box' (MLB), which is baited with human odours and treated with mosquitocidal agents. The findings are used to explore technical options and challenges relevant to luring and killing outdoor-biting malaria vectors in endemic settings. Field experiments were conducted in Tanzania to assess if wild host-seeking mosquitoes 1) visited the MLBs, 2) stayed long or left shortly after arrival at the device, 3) visited the devices at times when humans were also outdoors, and 4) could be killed by contaminants applied on the devices. Odours suctioned from volunteer-occupied tents were also evaluated as a potential low-cost bait, by comparing baited and unbaited MLBs. There were significantly more Anopheles arabiensis, An. funestus, Culex and Mansonia mosquitoes visiting baited MLB than unbaited controls (P<=0.028). Increasing sampling frequency from every 120 min to 60 and 30 min led to an increase in vector catches of up to 3.6 fold (P<=0.002), indicating that many mosquitoes visited the device but left shortly afterwards. Outdoor host-seeking activity of malaria vectors peaked between 7:30 and 10:30pm, and between 4:30 and 6:00am, matching durations when locals were also outdoors. Maximum mortality of mosquitoes visiting MLBs sprayed or painted with formulations of candidate mosquitocidal agent (pirimiphos-methyl) was 51%. Odours from volunteer occupied tents attracted significantly more mosquitoes to MLBs than controls (P<0.001). While odour-baited devices such as the MLBs clearly have potential against outdoor-biting mosquitoes in communities where LLINs are used, candidate contaminants must be those that are effective at ultra-low doses even after short contact periods, since important vector species such as An. arabiensis make only brief visits to such devices. Natural human odours suctioned from occupied dwellings could constitute affordable sources of attractants to supplement odour baits for the devices. The killing agents used should be environmentally safe, long lasting, and have different modes of action (other than pyrethroids as used on LLINs), to curb the risk of physiological insecticide resistance
СОЦІО-ЕКОНОМІЧНІ АСПЕКТИ ОРГАНІЗАЦІЇ«РОЗУМНОГО МІСТА»
<p>Breteau Index represents number of positive containers per 100 houses inspected. Stars indicate surveys with nil detection.</p
The identification and validation of neural tube defects in the General Practice Research Database
Background: Our objectives were to develop an algorithm for the identification of pregnancies in the General Practice Research Database (GPRD) that could be used to study birth outcomes and pregnancy and to determine if the GPRD could be used to identify cases of neural tube defects (NTDs). Methods: We constructed a pregnancy identification algorithm to identify pregnancies in 15 to 45 year old women between January 1, 1987 and September 14, 2004. The algorithm was evaluated for accuracy through a series of alternate analyses and reviews of electronic records. We then created electronic case definitions of anencephaly, encephalocele, meningocele and spina bifida and used them to identify potential NTD cases. We validated cases by querying general practitioners (GPs) via questionnaire. Results: We analyzed 98,922,326 records from 980,474 individuals and identified 255,400 women who had a total of 374,878 pregnancies. There were 271,613 full-term live births, 2,106 pre- or post-term births, 1,191 multi-fetus deliveries, 55,614 spontaneous abortions or miscarriages, 43,264 elective terminations, 7 stillbirths in combination with a live birth, and 1,083 stillbirths or fetal deaths. A marker of pregnancy care was identifiable for 330,153 pregnancies, eighty-four percent of which had data available at least 180 days prior to the first marker of pregnancy care. From the same population of 980,474 individuals, 217 NTD cases were identified. We attempted to validate all 217 NTD cases and 165 GP questionnaires were returned. We validated a NTD diagnosis for 117 cases, giving our electronic case definitions a positive predictive value of 0.71. The positive predictive value varied by NTD type: 0.81 for anencephaly, 0.83 for cephalocele, 0.64 for meningocele, and 0.47 for spina bifida. Conclusions: We were successful in identifying a large number of pregnancies in the GPRD. Our use of a hierarchical approach to identify pregnancy outcomes builds upon the methods suggested in previous work, while implementing additional steps to minimize potential misclassification of pregnancy outcomes. Our NTD identification algorithm was useful in identifying three of the four types of NTDs studied. Additional information is necessary to accurately identify cases of spina bifida
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