The Role of Nucleases and Nucleic Acid Editing Enzymes in the Regulation of Self-Nucleic Acid Sensing

Detection of microbial nucleic acids by the innate immune system is mediated by numerous intracellular nucleic acids sensors. Upon the detection of nucleic acids these sensors induce the production of inflammatory cytokines, and thus play a crucial role in the activation of anti-microbial immunity. In addition to microbial genetic material, nucleic acid sensors can also recognize self-nucleic acids exposed extracellularly during turn-over of cells, inefficient efferocytosis, or intracellularly upon mislocalization. Safeguard mechanisms have evolved to dispose of such self-nucleic acids to impede the development of autoinflammatory and autoimmune responses. These safeguard mechanisms involve nucleases that are either specific to DNA (DNases) or RNA (RNases) as well as nucleic acid editing enzymes, whose biochemical properties, expression profiles, functions and mechanisms of action will be detailed in this review. Fully elucidating the role of these enzymes in degrading and/or processing of self-nucleic acids to thwart their immunostimulatory potential is of utmost importance to develop novel therapeutic strategies for patients affected by inflammatory and autoimmune diseases.IdEx Bordeau

Self-Nucleic Acid Sensing: A Novel Crucial Pathway Involved in Obesity-Mediated Metaflammation and Metabolic Syndrome

Obesity and overweight are a global health problem affecting almost one third of the world population. There are multiple complications associated with obesity including metabolic syndrome that commonly lead to development of type II diabetes and non-alcoholic fatty liver disease. The development of metabolic syndrome and severe complications associated with obesity is attributed to the chronic low-grade inflammation that occurs in metabolic tissues such as the liver and the white adipose tissue. In recent years, nucleic acids (mostly DNA), which accumulate systemically in obese individuals, were shown to aberrantly activate innate immune responses and thus to contribute to metabolic tissue inflammation. This minireview will focus on (i) the main sources and forms of nucleic acids that accumulate during obesity, (ii) the sensing pathways required for their detection, and (iii) the key cellular players involved in this process. Fully elucidating the role of nucleic acids in the induction of inflammation induced by obesity would promote the identification of new and long-awaited therapeutic approaches to limit obesity-mediated complications

Autoantibody-mediated impairment of DNASE1L3 activity in sporadic systemic lupus erythematosus

Antibodies to double-stranded DNA (dsDNA) are prevalent in systemic lupus erythematosus (SLE), particularly in patients with lupus nephritis, yet the nature and regulation of antigenic cell-free DNA (cfDNA) are poorly understood. Null mutations in the secreted DNase DNASE1L3 cause human monogenic SLE with anti-dsDNA autoreactivity. We report that >50% of sporadic SLE patients with nephritis manifested reduced DNASE1L3 activity in circulation, which was associated with neutralizing autoantibodies to DNASE1L3. These patients had normal total plasma cfDNA levels but showed accumulation of cfDNA in circulating microparticles. Microparticle-associated cfDNA contained a higher fraction of longer polynucleosomal cfDNA fragments, which bound autoantibodies with higher affinity than mononucleosomal fragments. Autoantibodies to DNASE1L3- sensitive antigens on microparticles were prevalent in SLE nephritis patients and correlated with the accumulation of cfDNA in microparticles and with disease severity. DNASE1L3-sensitive antigens included DNA-associated proteins such as HMGB1. Our results reveal autoantibody-mediated impairment of DNASE1L3 activity as a common nongenetic mechanism facilitating antidsDNA autoreactivity in patients with severe sporadic SLE

Reuniting philosophy and science to advance cancer research

Cancers rely on multiple, heterogeneous processes at different scales, pertaining to many biomedical fields. Therefore, understanding cancer is necessarily an interdisciplinary task that requires placing specialised experimental and clinical research into a broader conceptual, theoretical, and methodological framework. Without such a framework, oncology will collect piecemeal results, with scant dialogue between the different scientific communities studying cancer. We argue that one important way forward in service of a more successful dialogue is through greater integration of applied sciences (experimental and clinical) with conceptual and theoretical approaches, informed by philosophical methods. By way of illustration, we explore six central themes: (i) the role of mutations in cancer; (ii) the clonal evolution of cancer cells; (iii) the relationship between cancer and multicellularity; (iv) the tumour microenvironment; (v) the immune system; and (vi) stem cells. In each case, we examine open questions in the scientific literature through a philosophical methodology and show the benefit of such a synergy for the scientific and medical understanding of cancer

Caractérisation fonctionelle des cellules dendritiques plasmacytoïdes infiltrant les tumeurs mammaires et identification de leurs proprietées migratoires dans les conditions inflammatoires

Les cellules dendritiques sont les principales cellules présentatrices d’antigènes, qui initient et modulent les réponses immunitaires. Parmi elles, les cellules dendritiques plasmacytoïdes (pDC) représentent les cellules effectrices clés de la réponse antivirale par leur production de fortes quantités d’interférons de type I (IFN). Leur infiltration dans les tumeurs mammaires est un facteur de mauvais pronostique, indiquant que l’environnement tumoral détourne la fonction des pDC pour qu’elles favorisent la croissance tumorale. Dans ce contexte, nous avons démontré que les pDC infiltrant les tumeurs (TiPDC) mammaires conservent leur capacité d’acquérir un phénotype mature en réponse aux ligands des TLR 7 et 9 et d’activer la prolifération des lymphocytes T naïfs, alors qu’elles sont fortement altérées pour leur production d’IFN de type I. Cette altération fonctionnelle est induite par le TGF-β et le TNFα produits par l’environnement tumoral. La phosphorylation de SMAD dans les TipDC in situ confirme le rôle de la signalisation du TGF-β dans la dysfonction des pDC. Ces observations i) démontrent les mécanismes par lesquels les tumeurs mammaires inhibent la fonction des pDC et ii) fournissent de nouvelles pistes thérapeutiques visant à bloquer les facteurs tumoraux responsables de l’altération fonctionnelle des pDC. Outre leur capacité à infiltrer différents types de tumeurs dont les carcinomes, les pDC sont également recrutées dans les épithéliums inflammés lors d’infections virales ou de pathologies autoimmunes. Les mécanismes régulant cette migration restent à ce jour peu élucidés. Dans ce contexte, nous démontrons qu’une sous-population de pDC dans l’amygdale co-exprime CCR6 et CCR10, les récepteurs aux chimiokines CCL20 et CCL27/28 responsables du recrutement des cellules immunes dans les sites épithéliaux. In situ, les pDC sont retrouvées en contact étroit avec les ligands de CCR6 et CCR10 dans les épithéliums inflammés, suggérant que les couples CCR6-CCL20 et CCR10-CCL27/28 contrôlent la migration des pDC dans ces sites. Ces observations ont été confirmées in vivo puisque le recrutement des pDC dans des tumeurs de mélanome induit lors d’une inflammation est aboli dans les souris déficientes pour CCR6. De plus, les pDC circulantes humaines acquièrent l’expression de CCR6 et CCR10 in vitro en présence d’IL-3 tout en conservant parallèlement leur capacité de produire de l’IFN de type I en réponse au virus. Ainsi, nos résultats démontrent que les pDC circulantes pourraient êtres conditionnées via l’expression de CCR6 et CCR10 à migrer dans les épithéliums inflammés lors de pathologies infectieuses et non-infectieuses, où elles seraient capables d’exercer leurs fonctions innées. Ces travaux pourraient mener au développement de nouvelles stratégies thérapeutique basées sur la mobilisation et la manipulation des fonctions des pDC de l’induction de tolérance à l’induction d’immunité anti-tumorale de type anti-viraleDendritic cells are professional antigen presenting cells initiating and modulating immune responses. Among them, plasmacytoid dendritic cells (pDC) represent key antiviral effectors through their production of high amounts of type I interferons (IFN). Their infiltration in breast tumors was correlated with a adverse clinical outcome, suggesting that the tumor environment somehow subvert pDC functions which in turn may promote the tumor growth. In this line, we demonstrated that breast tumor-associated pDC (TApDC) keep their ability to acquire a fully mature phenotype after TLR7 or 9 triggering and to activate naïve T cells proliferation, while they are strongly impaired for their capacity to produce type I IFN. This alteration of their main innate function is mediated by tumor-derived TGF-β and TNFα. SMAD phosphorylation in breast TApDC in situ further confirmed TGF-β signaling involvement in their dysfunction. These observations represent mechanistic of how breast tumors impair pDC function, and provide insights for developing new therapeutic strategies preventing the negative impact of tumor factors on infiltrating pDC. In addition to their description in many types of tumors including carcinoma, pDC also traffic into inflamed epithelial sites during viral infections or autoimmunity. But mechanisms underlying such pDC homing still remain unclear. Here we also report that a subset of tonsil pDC express CCR6 and CCR10 receptors for epithelial homing chemokines CCL20 and CCL27/28 respectively. In situ, pDC in inflamed epithelia are found in close contact with CCR6 and CCR10 ligands, indicating that CCR6/CCL20 and CCR10/CCL27/28 axis might mediate pDC homing in inflamed peripheral sites. These observations were further confirmed in vivo since inflammation-induced recruitment of pDC into melanoma tumor was abrogated in CCR6-deficient mice. Importantly, CCR6 and CCR10 expression was induced on human blood pDC in vitro in presence of IL-3 and such differentiated pDC keep their ability to produce type I IFN upon viral stimulation. Thus, our results also demonstrate that blood pDC might be conditioned through CCR6 and 10 upregulation to home inflamed epithelia during infectious or non-infectious disorders where they can exert their innate functions. This work may lead to the development of new therapeutic strategies to mobilize and manipulate the function of pDC - from inducing tolerance to inducing antiviral-like anti-tumor immunit

Corrigendum: The Role of Nucleases and Nucleic Acid Editing Enzymes in the Regulation of Self-Nucleic Acid Sensing (Frontiers in Immunology, (2021), 12, (629922), 10.3389/fimmu.2021.629922)

In the original article, there was a mistake in the legend for Figure 2 as published. The correct legend for Figure 2 was mistakenly omitted and replaced with the legend of figure 3. The correct legend appears below. DNASE1L3 deficiency leads to the accumulation of numerous forms of DNA including chromatin, MP associated DNA and NET-associated DNA. Accumulation of such DNA contributes to the aberrant activation of TLR7,9 in B cells and plasmacytoid dendritic cells (pDCs). In B cells TLR7,9 activation leads to their differentiation into plasma cells and antibody forming cells (AFC) that produce autoreactive antibodies mostly directed against dsDNA. In pDCs TLR7,9 activation induces the production of type I interferons (IFN-I) which also play an important role in the transition of B cells into AFC. The production of anti-dsDNA antibodies and of IFN-I will ultimately cause the development of Systemic Lupus Erythematosus (SLE). The authors apologize for this error and state that this does not change the scientific conclusions of the article in any way. The original article has been updated. (Figure presented.)

ICOS is associated with poor prognosis in breast cancer as it promotes the amplification of immunosuppressive CD4+T cells by plasmacytoid dendritic cells

International audienc

Plasmacytoid dendritic cells deficient in IFNα production promote the amplification of FOXP3+regulatory T cells and are associated with poor prognosis in breast cancer patients

International audienceThe accumulation of plasmacytoid dendritic cells (pDCs) within breast carcinoma lesions is associated with a poor clinical outcome. We demonstrated that the deleterious impact of tumor-associated pDCs (TApDCs) is due to their impaired capacity to produce Type I interferon, which in turn potentiates their ability to sustain the proliferation of immunosuppressive regulatory T cells