551 research outputs found

    Mixing height determination by ceilometer

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    International audienceA novel method for estimating the mixing height based on ceilometer measurements is described and tested against commonly used methods for determining mixing height. In this method an idealised backscatter profile is fitted to the observed backscatter profile. The mixing height is one of the idealised backscatter profile parameters. An extensive amount of ceilometer data and vertical soundings data from the Helsinki area in 2002 is utilized to test the applicability of the ceilometer for mixing height determination. The results, including 71 convective and 38 stable cases, show that in clear sky conditions the mixing heights determined from ceilometer based aerosol profiles and BL-height estimates based on sounding data are in a good agreement. Rejected outlier cases corresponded to very low aerosol concentrations in the mixed layer leading to a very weak aerosol backscatter signal in the lowest layer

    Localized thinning for strain concentration in suspended germanium membranes and optical method for precise thickness measurement

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    We deposited Ge layers on (001) Si substrates by molecular beam epitaxy and used them to fabricate suspended membranes with high uniaxial tensile strain. We demonstrate a CMOS-compatible fabrication strategy to increase strain concentration and to eliminate the Ge buffer layer near the Ge/Si hetero-interface deposited at low temperature. This is achieved by a two-steps patterning and selective etching process. First, a bridge and neck shape is patterned in the Ge membrane, then the neck is thinned from both top and bottom sides. Uniaxial tensile strain values higher than 3% were measured by Raman scattering in a Ge membrane of 76 nm thickness. For the challenging thickness measurement on micrometer-size membranes suspended far away from the substrate a characterization method based on pump-and-probe reflectivity measurements was applied, using an asynchronous optical sampling technique.EC/FP7/628197/EU/Heat Propagation and Thermal Conductivity in Nanomaterials for Nanoscale Energy Management/HEATPRONAN

    The bile salt glycocholate induces global changes in gene and protein expression and activates virulence in enterotoxigenic Escherichia coli

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    Pathogenic bacteria use specific host factors to modulate virulence and stress responses during infection. We found previously that the host factor bile and the bile component glyco-conjugated cholate (NaGCH, sodium glycocholate) upregulate the colonization factor CS5 in enterotoxigenic Escherichia coli (ETEC). To further understand the global regulatory effects of bile and NaGCH, we performed Illumina RNA-Seq and found that crude bile and NaGCH altered the expression of 61 genes in CS5 + CS6 ETEC isolates. The most striking finding was high induction of the CS5 operon (csfA-F), its putative transcription factor csvR, and the putative ETEC virulence factor cexE. iTRAQ-coupled LC-MS/MS proteomic analyses verified induction of the plasmid-borne virulence proteins CS5 and CexE and also showed that NaGCH affected the expression of bacterial membrane proteins. Furthermore, NaGCH induced bacteria to aggregate, increased their adherence to epithelial cells, and reduced their motility. Our results indicate that CS5 + CS6 ETEC use NaGCH present in the small intestine as a signal to initiate colonization of the epithelium

    Interdisciplinary research: Benefits and challenges

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    A Cold Front in A3667: Hydrodynamics and Magnetic Field in the Intracluster Medium

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    This conference presentation discusses a Chandra observation of the cold front in Abell 3667. We first review our earlier results which include a measurement of the front velocity, M~1, using the ratio of exterior and interior gas pressures; observations of the hydrodynamic effects expected for a transonic front motion (weak bow shock and gas compression near the leading edge of the front); direct observation of the suppressed diffusion across the front, and estimate of the magnetic field strength near the front from suppression of the Kelvin-Helmholtz instabilities. The new results include using the 2-dimensional brightness distribution inside the cold front (a) to show that the front is stable and (b) to map the mass distribution in the gas cloud. This analysis confirms the existence of a dark matter subcluster traveling with the front. We also fix an algebraic error in our published calculations for the growth rate of the KH instability and discuss an additional effect which could stabilize the front against the small-scale perturbations. These updates only strengthen our conclusions regarding the importance of the magnetic fields for the front dynamics.Comment: Shortened version of the paper published in Astronomy Letters; based on talk at conference "High Energy Astrophysics 2001", Moscow, Dec 200

    Revealing high-z Fermi-LAT BL Lacs using Swift and SARA data with photometric analysis

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    BL Lacertae (BL Lac) objects are one type of blazar, distinguished by their featureless optical spectrum. This presents a challenge in measuring the redshift of the BL Lacs. This paper uses the photometric dropout technique to measure the redshifts of BL Lac objects. Space-based telescope \emph{Swift} and ground-based SARA telescopes are employed to provide magnitudes in the $uvw2,\ uvm2,\ uvw1,\ u,\ b,\ v,\ g',\ r',\ i',\ z'filters.Weobserve60BLLacsandreportreliableredshiftupperlimitsfor41sources.Wediscoverfourhigh filters. We observe 60 BL Lacs and report reliable redshift upper limits for 41 sources. We discover four high-zBLLacs( BL Lacs (z>1.3),bringingthenumberofhigh), bringing the number of high-z BL Lacs found by this method up to 20. We also discuss the blazar sequence, the \emph{Fermi} blazar divide, and the gamma-ray horizon using the 4LAC catalog and all high-z$ BL Lacs discovered with the photo-z technique.Comment: 16pages, 7 figure

    Genome Wide Transcriptome Analysis of Dendritic Cells Identifies Genes with Altered Expression in Psoriasis

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    Activation of dendritic cells by different pathogens induces the secretion of proinflammatory mediators resulting in local inflammation. Importantly, innate immunity must be properly controlled, as its continuous activation leads to the development of chronic inflammatory diseases such as psoriasis. Lipopolysaccharide (LPS) or peptidoglycan (PGN) induced tolerance, a phenomenon of transient unresponsiveness of cells to repeated or prolonged stimulation, proved valuable model for the study of chronic inflammation. Thus, the aim of this study was the identification of the transcriptional diversity of primary human immature dendritic cells (iDCs) upon PGN induced tolerance. Using SAGESeq approach, a tag-based transcriptome sequencing method, we investigated gene expression changes of primary human iDCs upon stimulation or restimulation with Staphylococcus aureus derived PGN, a widely used TLR2 ligand. Based on the expression pattern of the altered genes, we identified non-tolerizeable and tolerizeable genes. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (Kegg) analysis showed marked enrichment of immune-, cell cycle- and apoptosis related genes. In parallel to the marked induction of proinflammatory mediators, negative feedback regulators of innate immunity, such as TNFAIP3, TNFAIP8, Tyro3 and Mer are markedly downregulated in tolerant cells. We also demonstrate, that the expression pattern of TNFAIP3 and TNFAIP8 is altered in both lesional, and non-lesional skin of psoriatic patients. Finally, we show that pretreatment of immature dendritic cells with anti-TNF-α inhibits the expression of IL-6 and CCL1 in tolerant iDCs and partially releases the suppression of TNFAIP8. Our findings suggest that after PGN stimulation/restimulation the host cell utilizes different mechanisms in order to maintain critical balance between inflammation and tolerance. Importantly, the transcriptome sequencing of stimulated/restimulated iDCs identified numerous genes with altered expression to date not associated with role in chronic inflammation, underlying the relevance of our in vitro model for further characterization of IFNprimed iDCs

    Accounting Problems Under the Excess Profits Tax

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    DNA vaccines based on subunits from pathogens have several advantages over other vaccine strategies. DNA vaccines can easily be modified, they show good safety profiles, are stable and inexpensive to produce, and the immune response can be focused to the antigen of interest. However, the immunogenicity of DNA vaccines which is generally quite low needs to be improved. Electroporation and co-delivery of genetically encoded immune adjuvants are two strategies aiming at increasing the efficacy of DNA vaccines. Here, we have examined whether targeting to antigen-presenting cells (APC) could increase the immune response to surface envelope glycoprotein (Env) gp120 from Human Immunodeficiency Virus type 1 (HIV- 1). To target APC, we utilized a homodimeric vaccine format denoted vaccibody, which enables covalent fusion of gp120 to molecules that can target APC. Two molecules were tested for their efficiency as targeting units: the antibody-derived single chain Fragment variable (scFv) specific for the major histocompatilibility complex (MHC) class II I-E molecules, and the CC chemokine ligand 3 (CCL3). The vaccines were delivered as DNA into muscle of mice with or without electroporation. Targeting of gp120 to MHC class II molecules induced antibodies that neutralized HIV-1 and that persisted for more than a year after one single immunization with electroporation. Targeting by CCL3 significantly increased the number of HIV-1 gp120-reactive CD8(+) T cells compared to non-targeted vaccines and gp120 delivered alone in the absence of electroporation. The data suggest that chemokines are promising molecular adjuvants because small amounts can attract immune cells and promote immune responses without advanced equipment such as electroporation.Funding Agencies|Research Council of Norway; Odd Fellow</p

    Estado del arte de la quinua en el mundo en 2013

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    Alimento de base de las poblaciones andinas desde hace milenios, la quinua se ha convertido hoy en un producto apreciado en el mercado internacional de alimentos dietéticos, orgánicos y equitativos. Este cambio lo iniciaron los mismos productores del Altiplano Sur de Bolivia hace aproximadamente unos 40 años. En medio de un desierto de altura, ellos lograron desarrollar una floreciente producción agrícola de exportación. Aunque cuentan con lucrativos nichos de mercado, los productores de quinua no son agricultores especializados, ni residen de forma permanente en la zona de producción. Estas son algunas de las paradojas que caracterizan la producción de quinua en el Altiplano Sur de Bolivia. Después de describir el origen, la diversidad y los rasgos biológicos del ecotipo Quinua Real en el cual se basa la producción de esta zona, se plantea la importancia de la quinua en los agrosistemas locales y, más allá, en los sistemas de actividades agrícolas y no agrícolas manejados por las familias del Altiplano Sur. Movilidad geográfica y pluriactividad forman parte del modo de vida ancestral de estas poblaciones y determinan hasta hoy en día las condiciones de uso de los recursos territoriales y la organización de los productores en el contexto del auge comercial de la quinua. La producción actual de quinua en la región presenta rasgos de vulnerabilidad agroecológica y social, así como capacidades adaptativas para enfrentarlos. Se resaltan como puntos clave para la sostenibilidad de los agrosistemas locales : i) la concertación de reglas comunales e individuales para el acceso y uso de la tierra en agrosistemas socialmente equitativos y equilibrados entre cultivo y ganadería, ii) las normas internacionales para el reconocimiento de la Quinua Real en los mercados de exportación, iii) una actualización continua de las reglas y normas para mantener la adaptabilidad de los agrosistemas locales a los cambios imprevisibles del contexto socio-ecológico a varias escalas de espacio y de tiempo
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