Climatic controls on biophysical interactions in the Black Sea under present day conditions and a potential future (A1B) climate scenario

A dynamical downscaling approach has been applied to investigate climatic controls on biophysical interactions and lower trophic level dynamics in the Black Sea. Simulations were performed under present day conditions (1980–1999) and a potential future (2080–2099) climate scenario, based on the Intergovernmental Panel for Climate Change A1B greenhouse gas emission scenario. Simulations project a 3.7 °C increase in SST, a 25% increase in the stability of the seasonal thermocline and a 37 day increase in the duration of seasonal stratification. Increased winter temperatures inhibited the formation of Cold Intermediate Layer (CIL) waters resulting in near complete erosion of the CIL, with implications for the ventilation of intermediate water masses and the subduction of riverine nutrients. A 4% increase in nitrate availability within the upper 30 m of the water column reflected an increase in the retention time of river water within the surface mixed-layer. Changes in thermohaline structure, combined with a 27% reduction in positive wind stress curl, forced a distinct change in the structure of the basin-scale circulation. The predominantly cyclonic circulation characteristic of contemporary conditions was reversed within the southern and eastern regions of the basin, where under A1B climatic conditions, anticyclonic circulation prevailed. The change in circulation structure significantly altered the horizontal advection and dispersion of high nutrient river waters originating on the NW self. Net primary production increased by 5% on average, with much spatial variability in the response, linked to advective processes. Phytoplankton biomass also increased by 5% and the higher nutrient environment of the future scenario caused a shift in species composition in favour of larger phytoplankton. No significant change in zooplankton biomass was projected. These results constitute one of many possible future scenarios for the Black Sea, being dependent on the modelling systems employed in addition to the choice of emission scenario. Our results emphasise in particular the sensitivity of dynamical downscaling studies to the regional wind forcing fields extracted from global models (these being typically model dependent). As atmospheric warming is projected with a high degree of confidence warming of the Black Sea upper layer, increased water column stability, and erosion of the CIL are believed to be robust results of this study

High-throughput screening of tick-borne pathogens in Europe

Due to increased travel, climatic, and environmental changes, the incidence of tick-borne disease in both humans and animals is increasing throughout Europe. Therefore, extended surveillance tools are desirable. To accurately screen tick-borne pathogens (TBPs), a large scale epidemiological study was conducted on 7050 Ixodes ricinus nymphs collected from France, Denmark, and the Netherlands using a powerful new high-throughput approach. This advanced methodology permitted the simultaneous detection of 25 bacterial, and 12 parasitic species (including; Borrelia, Anaplasma, Ehrlichia, Rickettsia, Bartonella, Candidatus Neoehrlichia, Coxiella, Francisella, Babesia, and Theileria genus) across 94 samples. We successfully determined the prevalence of expected (Borrelia burgdorferi sensu lato, Anaplasma phagocytophilum, Rickettsia helvetica, Candidatus Neoehrlichia mikurensis, Babesia divergens, Babesia venatorum), unexpected (Borrelia miyamotoi), and rare (Bartonella henselae) pathogens in the three European countries. Moreover we detected Borrelia spielmanii, Borrelia miyamotoi, Babesia divergens, and Babesia venatorum for the first time in Danish ticks. This surveillance method represents a major improvement in epidemiological studies, able to facilitate comprehensive testing of TBPs, and which can also be customized to monitor emerging diseases

Drinking water treatment for a rural karst region in Indonesia

An interdisciplinary German–Indonesian joint research project on Integrated Water Resources Management (IWRM) focused on the development and exemplary implementation of adapted technologies to improve the water supply situation in a model karst region in southern Java. The project involving 19 sub-projects covers exploration of water resources, water extraction, distribution as well as water quality assurance, and waste water treatment. For the water quality assurance, an appropriate and sustainable drinking water treatment concept was developed and exemplarily implemented. Monitoring results showed that the main quality issue was the contamination with hygienically relevant bacteria. Based on the gained results, a water treatment concept was developed consisting of a central sand filtration prior to the distribution network, a semi-central hygienization where large water volumes are needed to remove bacteria deriving from water distribution and a final point-of-use water treatment. This paper focuses on the development of a central sand filtration plant and some first analysis for the development of a recipe for the local production of ceramic filters for household water treatment. The first results show that arsenic and manganese are leaching from the filters made of local raw material. Though discarding the first, filtrates should be sufficient to reduce arsenic and manganese concentration effectively. Moreover, hydraulic conductivities of filter pots made of 40 % pore-forming agents are presented and discussed

Potential impacts of climate change on the primary production of regional seas: A comparative analysis of five European seas

Regional seas are potentially highly vulnerable to climate change, yet are the most directly societally important regions of the marine environment. The combination of widely varying conditions of mixing, forcing, geography (coastline and bathymetry) and exposure to the open-ocean makes these seas subject to a wide range of physical processes that mediates how large scale climate change impacts on these seas’ ecosystems. In this paper we explore the response of five regional sea areas to potential future climate change, acting via atmospheric, oceanic and terrestrial vectors. These include the Barents Sea, Black Sea, Baltic Sea, North Sea, Celtic Seas, and are contrasted with a region of the Northeast Atlantic. Our aim is to elucidate the controlling dynamical processes and how these vary between and within these seas. We focus on primary production and consider the potential climatic impacts on: long term changes in elemental budgets, seasonal and mesoscale processes that control phytoplankton’s exposure to light and nutrients, and briefly direct temperature response. We draw examples from the MEECE FP7 project and five regional model systems each using a common global Earth System Model as forcing. We consider a common analysis approach, and additional sensitivity experiments. Comparing projections for the end of the 21st century with mean present day conditions, these simulations generally show an increase in seasonal and permanent stratification (where present). However, the first order (low- and mid-latitude) effect in the open ocean projections of increased permanent stratification leading to reduced nutrient levels, and so to reduced primary production, is largely absent, except in the NE Atlantic. Even in the two highly stratified, deep water seas we consider (Black and Baltic Seas) the increase in stratification is not seen as a first order control on primary production. Instead, results show a highly heterogeneous picture of positive and negative change arising from complex combinations of multiple physical drivers, including changes in mixing, circulation and temperature, which act both locally and non-locally through advection

Cellular and Molecular Mechanisms Underlying the Strong Neonatal IL-12 Response of Lamb Mesenteric Lymph Node Cells to R-848

International audienceabsen

Differential Expression of Cytokines in Response to Respiratory Syncytial Virus Infection of Calves with High or Low Circulating 25-Hydroxyvitamin D3

Deficiency of serum levels of 25-hydroxyvitamin D3 has been related to increased risk of lower respiratory tract infections in children. Respiratory syncytial virus (RSV) is a leading cause of low respiratory tract infections in infants and young children. The neonatal calf model of RSV infection shares many features in common with RSV infection in infants and children. In the present study, we hypothesized that calves with low circulating levels of 25-hydroxyvitamin D3 (25(OH)D3) would be more susceptible to RSV infection than calves with high circulating levels of 25(OH)D3. Calves were fed milk replacer diets with different levels of vitamin D for a 10 wk period to establish two treatment groups, one with high (177 ng/ml) and one with low (32.5 ng/ml) circulating 25(OH)D3. Animals were experimentally infected via aerosol challenge with RSV. Data on circulating 25(OH)D3 levels showed that high and low concentrations of 25(OH)D3 were maintained during infection. At necropsy, lung lesions due to RSV were similar in the two vitamin D treatment groups. We show for the first time that RSV infection activates the vitamin D intracrine pathway in the inflamed lung. Importantly, however, we observed that cytokines frequently inhibited by this pathway in vitro are, in fact, either significantly upregulated (IL-12p40) or unaffected (IFN-γ) in the lungs of RSV-infected calves with high circulating levels of 25(OH)D3. Our data indicate that while vitamin D does have an immunomodulatory role during RSV infection, there was no significant impact on pathogenesis during the early phases of RSV infection. Further examination of the potential effects of vitamin D status on RSV disease resolution will require longer-term studies with immunologically sufficient and deficient vitamin D levels

Evidence for the existence of a new genus Chlamydiifrater gen. nov. inside the family Chlamydiaceae with two new species isolated from flamingo (Phoenicopterus roseus): Chlamydiifrater phoenicopteri sp. nov. and Chlamydiifrater volucris sp. nov.

The family Chlamydiaceae currently comprises a single genus Chlamydia, with 11 validly published species and seven more taxa. It includes the human pathogens Chlamydia (C.) trachomatis, C. pneumoniae and C. psittaci, a zoonotic agent causing avian chlamydiosis and human psittacosis, as well as other proven or potential pathogens in ruminants, birds, snakes, reptiles and turtles. During routine testing of 15 apparently healthy captive flamingos in a zoo in 2011, an atypical strain of Chlamydiaceae was detected by real-time PCR of cloacal swab samples. Sequence analysis of the 16S rRNA gene revealed high similarity to the uncultured Chlamydiales bacterium clone 122, which previously had been found in gulls. As more samples were collected during annual campaigns of the flamingo ringing program in southern France from 2012 to 2015, Chlamydiaceae-specific DNA was detected by PCR in 30.9% of wild birds. From these samples, three strains were successfully grown in cell culture. Ultrastructural analysis, comparison of 16S and 23S rRNA gene sequences, whole-genome analysis based on de novo hybrid-assembled sequences of the new strains as well as subsequent calculation of taxonomic parameters revealed that the relatedness of the flamingo isolates to established members of the family Chlamydiaceae was sufficiently distant to indicate that the three strains belong to two distinct species within a new genus. Based on these data, we propose the introduction of Chlamydiifrater gen. nov., as a new genus, and Chlamydiifrater phoenicopteri sp. nov. and Chlamydiifrater volucris sp. nov., as two new species of the genus.Martin Hölzer appreciates the support of the Joachim Herz Foundation by the add-on fellowship for interdisciplinary life science.Peer reviewe