Chromatic Bacteria v.2-A Himar1 Transposon-Based Delivery Vector to Extend the Host Range of a Toolbox to Fluorescently Tag Bacteria

A recent publication described the construction and utility of a comprehensive “Chromatic Bacteria” toolbox containing a set of genetic tools that allows for fluorescently tagging a variety of Proteobacteria. In an effort to expand the range of bacteria taggable with the Chromatic Bacteria toolbox, a series of Himar1 transposon vectors was constructed to mediate insertion of fluorescent protein and antibiotic resistant genes. The Himar1 transposon was chosen as it is known to function in a wide range of bacterial species. To test the suitability of the new Himar1 Chromatic Bacteria plasmid derivatives, conjugations were attempted on recently isolated non-model organisms. Although we were unsuccessful in delivering the plasmids into Gram-positive bacterial isolates, we successfully modified previously recalcitrant isolates to the first set of the Chromatic Bacteria toolbox, such as Sphingomonas sp. Leaf357 and Acidovorax sp. Leaf84. This manuscript reports on the currently available plasmids and transposition success in different bacteria

Easy tuning of nanotexture and N doping of carbonaceous particles produced by spark discharge

A better understanding of the effects of carbonaceous particulates in air pollution on human health and on the transmission of viruses requires studies with artificially produced aerosols that mimic the real ones. To produce such aerosols, methods to precisely tailor the morphology as well as the physical and chemical properties of carbon-based nanomaterials are crucial. Here we describe a facile and flexible approach to produce carbon-based nanoparticles with tailored N content by spark discharge utilizing graphite rods. Carbon-based nanoparticles with different nanotexture and N doping could be obtained by simply changing dilution gas (nitrogen, argon) and dilution gas purity (99 and 99.999%). The effect of the discharge frequency (50, 300 Hz) was also explored. The carbon-based nanoparticles were characterized by Fourier transform infrared and X-ray photoelectron spectroscopy, thermogravimetric analysis, and transmission electron microscopy. We find that the nanotexture is strictly linked to the chemical reactivity and to the surface chemistry. The use of N2 as dilution gas allowed for the incorporation of significant amounts of nitrogen (5–7 wt.%) in the carbonaceous particle network mainly as pyrrolic N, graphitic N and N-oxide functional groups

Klimawandel-Anpassungsbereitschaft von Unternehmen in der Oberrhein-Region aus Sicht der Unternehmen – Eine multidisziplinäre, grenzüberschreitende Analyse

Companies can be affected by climate change in many ways. Effective adaptation to climate change will only be possible if the associated risks and opportunities as well as their own strengths and weaknesses are sufficiently known. Following the conceptual framework of a SWOT analysis, this article outlines the self-perception of companies from the Upper Rhine region regarding their climate change vulnerability. Based on 26 qualitative semi-structured company interviews, managers’ statements on climate change-related strengths, weaknesses, opportunities and threats are divided into three categories based on the business function concerned. The resulting 4×3 matrix is used to analyse which aspects companies do not pay much attention to. We also highlight typical, frequently cited strengths, weaknesses, opportunities and threats. It appears that the majority of companies perceive climate change as an external threat but see themselves in a position to counter this threat with the help of internal qualities

Metabolic resource overlap impacts competition among phyllosphere bacteria

The phyllosphere is densely colonised by microbial communities, despite sparse and heterogeneously distributed resources. The limitation of resources is expected to drive bacterial competition resulting in exclusion or coexistence based on fitness differences and resource overlap between individual colonisers. We studied the impact of resource competition by determining the effects of different bacterial colonisers on the growth of the model epiphyte Pantoea eucalypti 299R (Pe299R). Resource overlap was predicted based on genome-scale metabolic modelling. By combining results of metabolic modelling and pairwise competitions in the Arabidopsis thaliana phyllosphere and in vitro, we found that ten resources sufficed to explain fitness of Pe299R. An effect of both resource overlap and phylogenetic relationships was found on competition outcomes in vitro as well as in the phyllosphere. However, effects of resource competition were much weaker in the phyllosphere when compared to in vitro experiments. When investigating growth dynamics and reproductive success at the single-cell resolution, resource overlap and phylogenetic relationships are only weakly correlated with epiphytic Pe299R reproductive success, indicating that the leaf’s spatial heterogeneity mitigates resource competition. Although the correlation is weak, the presence of competitors led to the development of Pe299R subpopulations that experienced different life histories and cell divisions. In some in planta competitions, Pe299R benefitted from the presence of epiphytes despite high resource overlap to the competitor strain suggesting other factors having stronger effects than resource competition. This study provides fundamental insights into how bacterial communities are shaped in heterogeneous environments and a framework to predict competition outcomes

Defect ferromagnetism induced by lower valence cation doping:Li-doped SnO(2)nanoparticles

To explore the role of Li in establishing room-temperature ferromagnetism in SnO2, the structural, electronic and magnetic properties of Li-doped SnO(2)compounds were studied for different size regimes, from nanoparticles to bulk crystals. Li-doped nanoparticles show ferromagnetic ordering plus a paramagnetic contribution for particle sizes in the range of 16-51 nm, while pure SnO(2)and Li-doped compounds below and above this particular size range are diamagnetic. The magnetic moment is larger for compositions where the Li substitutes for Sn than for compositions where Li prevalently occupies interstitial sites. The observed ferromagnetic ordering in Li-doped SnO(2)nanoparticles is mainly due to the holes created when Li substitutes at a Sn site. Conversely, Li acts as an electron donor and electrons from Li may combine with holes to decrease ferromagnetism when lithium mainly occupies interstitial sites in the SnO(2)lattice

Electronic band structure of three-dimensional topological insulators with different stoichiometry composition

We report on a comparative theoretical and experimental investigation of the electronic band structure of a family of three-dimensional topological insulators, AIVBi4Te7−xSex (AIV= Sn, Pb;x = 0, 1). We prove by means of density functional theory calculations and angle-resolved photoemission spectroscopy measurements that partial or total substitution of heavy atoms by lighter isoelectronic ones affects the electronic properties of topological insulators. In particular, we show that the modification of the Dirac cone position relative to the Fermi level and the bulk band gap size can be controlled by varying the stoichiometry of the compound. We also demonstrate that the investigated systems are inert to oxygen exposure.The authors acknowledge financial support from the Saint Petersburg State University (Grant No. 40990069), the Tomsk State University competitiveness improvement program (Grant No. 8.1.01.2018), the Fundamental Research Program of the State Academies of Sciences (line of research III.23.2.9), and the project EUROFEL-ROADMAP ESFRI. This work was also partly supported by the Italian Ministry of Education, Universities and Research (MIUR) through project PON03PE_00092_1 (EOMAT) and by the Science Development Foundation under the President of the Republic of Azerbaijan (Grant No. EIF/MQM/Elm-Tehsil-1-2016- 1(26)-71/01/4-M-33). S.V.E. acknowledges support from the Russian Science Foundation (Grant No. 18-12-00169) for part of the electronic band structure calculations.Peer reviewe

Smoothed universal correlations in the two-dimensional Anderson model

We report on calculations of smoothed spectral correlations in the two-dimensional Anderson model for weak disorder. As pointed out in (M. Wilkinson, J. Phys. A: Math. Gen. 21, 1173 (1988)), an analysis of the smoothing dependence of the correlation functions provides a sensitive means of establishing consistency with random matrix theory. We use a semiclassical approach to describe these fluctuations and offer a detailed comparison between numerical and analytical calculations for an exhaustive set of two-point correlation functions. We consider parametric correlation functions with an external Aharonov-Bohm flux as a parameter and discuss two cases, namely broken time-reversal invariance and partial breaking of time-reversal invariance. Three types of correlation functions are considered: density-of-states, velocity and matrix element correlation functions. For the values of smoothing parameter close to the mean level spacing the semiclassical expressions and the numerical results agree quite well in the whole range of the magnetic flux.Comment: 12 pages, 14 figures submitted to Phys. Rev.

Femtosecond control of electric currents at the interfaces of metallic ferromagnetic heterostructures

The idea to utilize not only the charge but also the spin of electrons in the operation of electronic devices has led to the development of spintronics, causing a revolution in how information is stored and processed. A novel advancement would be to develop ultrafast spintronics using femtosecond laser pulses. Employing terahertz (10$^{12}$ Hz) emission spectroscopy, we demonstrate optical generation of spin-polarized electric currents at the interfaces of metallic ferromagnetic heterostructures at the femtosecond timescale. The direction of the photocurrent is controlled by the helicity of the circularly polarized light. These results open up new opportunities for realizing spintronics in the unprecedented terahertz regime and provide new insights in all-optical control of magnetism.Comment: 3 figures and 2 tables in the main tex

Plasma Driven Exsolution for Nanoscale Functionalization of Perovskite Oxides

Perovskite oxides with dispersed nanoparticles on their surface are considered instrumental in energy conversion and catalytic processes. Redox exsolution is an alternative method to the conventional deposition techniques for directly growing well-dispersed and anchored nanoarchitectures from the oxide support through thermochemical or electrochemical reduction. Herein, a new method for such nanoparticle nucleation through the exposure of the host perovskite to plasma is shown. The applicability of this new method is demonstrated by performing catalytic tests for CO2 hydrogenation over Ni exsolved nanoparticles prepared by either plasma or conventional H2 reduction. Compared to the conventional thermochemical H2 reduction, there are plasma conditions that lead to the exsolution of a more than ten times higher Ni amount from a lanthanum titanate perovskite, which is similar to the reported values of the electrochemical method. Unlike the electrochemical method, however, plasma does not require the integration of the material in an electrochemical cell, and is thus applicable to a wide range of microstructures and physical forms. Additionally, when N2 plasma is employed, the nitrogen species are stripping out oxygen from the perovskite lattice, generating a key chemical intermediate, such as NO, rendering this technology even more appealing.</p

Do effects of ultraviolet radiation on microbial films have indirect effects on larval attachment of the barnacle Balanus amphitrite?

Abstract We have examined the indirect effects of UV-A and UV-B on cypris attachment of the barnacle Balanus amphitrite Darwin through their effects on microbial films. Specifically, we tested the hypothesis that both UV-A and UV-B radiation can indirectly affect the larval attachment of barnacles by altering the microbial film bioactivity. Microbial films were developed from midintertidal region (~1 m above Mean Low Water Level) for 6 days and subjected to ambient levels of ultraviolet radiation. Response of cyprids to untreated and UV-treated microbial films was investigated using double-dish still water choice bioassay. Results showed that both UV-A and UV-B caused a decrease in the percentage of respiring bacterial cells in microbial films and this effect increased with UV energy. With the same UV energy, UV-B caused a greater decrease in respiring bacterial cells than UV-A. However, despite strong UV radiation, the bioactivities of microbial films (i.e., stimulation of cypris attachment) remain unchanged. Results of this study suggest that increased UV radiation, which might occur due to ozone depletion, may not significantly affect the barnacle recruitment by means of affecting the inductive larval attachment cues of microbial films.