Experimental exposure to urban and pink noise affects brain development and song learning in zebra finches (Taenopygia guttata)

Recently, numerous studies have observed changes in bird vocalizations-especially song-in urban habitats. These changes are often interpreted as adaptive, since they increase the active space of the signal in its environment. However, the proximate mechanisms driving cross-generational changes in song are still unknown. We performed a captive experiment to identify whether noise experienced during development affects song learning and the development of song-control brain regions. Zebra finches (Taeniopygia guttata) were bred while exposed, or not exposed, to recorded traffic urban noise (Study 1) or pink noise (Study 2). We recorded the songs of male offspring and compared these to fathers\u27 songs. We also measured baseline corticosterone and measured the size of song-control brain regions when the males reached adulthood (Study 1 only). While male zebra finches tended to copy syllables accurately from tutors regardless of noise environment, syntax (the ordering of syllables within songs) was incorrectly copied affected by juveniles exposed to noise. Noise did not affect baseline corticosterone, but did affect the size of brain regions associated with song learning: these regions were smaller in males that had been had been exposed to recorded traffic urban noise in early development. These findings provide a possible mechanism by which noise affects behaviour, leading to potential population differences between wild animals occupying noisier urban environments compared with those in quieter habitats

Experimental Exposure to Urban and Pink Noise Affects Brain Development and Song Learning in Zebra Finches (Taenopygia guttata)

Recently, numerous studies have observed changes in bird vocalizations—especially song—in urban habitats. These changes are often interpreted as adaptive, since they increase the active space of the signal in its environment. However, the proximate mechanisms driving cross-generational changes in song are still unknown. We performed a captive experiment to identify whether noise experienced during development affects song learning and the development of song-control brain regions. Zebra finches (Taeniopygia guttata) were bred while exposed, or not exposed, to recorded traffic urban noise (Study 1) or pink noise (Study 2). We recorded the songs of male offspring and compared these to fathers’ songs. We also measured baseline corticosterone and measured the size of song-control brain regions when the males reached adulthood (Study 1 only). While male zebra finches tended to copy syllables accurately from tutors regardless of noise environment, syntax (the ordering of syllables within songs) was incorrectly copied affected by juveniles exposed to noise. Noise did not affect baseline corticosterone, but did affect the size of brain regions associated with song learning: these regions were smaller in males that had been had been exposed to recorded traffic urban noise in early development. These findings provide a possible mechanism by which noise affects behaviour, leading to potential population differences between wild animals occupying noisier urban environments compared with those in quieter habitats

Birds Learn Socially to Recognize Heterospecific Alarm Calls by Acoustic Association

Animals in natural communities gain information from members of other species facing similar ecological challenges [1, 2, 3, 4, 5], including many vertebrates that recognize the alarm calls of heterospecifics vulnerable to the same predators [6]. Learning is critical in explaining this widespread recognition [7, 8, 9, 10, 11, 12, 13], but there has been no test of the role of social learning in alarm-call recognition, despite the fact that it is predicted to be important in this context [14, 15]. We show experimentally that wild superb fairy-wrens, Malurus cyaneus, learn socially to recognize new alarm calls and can do so through the previously undemonstrated mechanism of acoustic-acoustic association of unfamiliar with known alarm calls. Birds were trained in the absence of any predator by broadcasting unfamiliar sounds, to which they did not originally flee, in combination with a chorus of conspecific and heterospecific aerial alarm calls (typically given to hawks in flight). The fairy-wrens responded to the new sounds after training, usually by fleeing to cover, and responded equally as strongly in repeated tests over a week. Control playbacks showed that the response was not due simply to greater wariness. Fairy-wrens therefore learnt to associate new calls with known alarm calls, without having to see the callers or a predator. This acoustic-acoustic association mechanism of social learning could result in the rapid spread of alarm-call recognition in natural communities, even when callers or predators are difficult to observe. Moreover, this mechanism offers potential for use in conservation by enhancing training of captive-bred individuals before release into the wild

Identifying hybridization and admixture using SNPs:Application of the DArTseq platforminphylogeographic research on vertebrates

Next-generation sequencing (NGS) approaches are increasingly being used to generate multi-locus data for phylogeographic and evolutionary genetics research. We detail the applicability of a restriction enzyme-mediated genome complexity reduction approach with subsequent NGS (DArTseq) in vertebrate study systems at different evolutionary and geographical scales. We present two case studies using SNP data from the DArTseq molecular marker platform. First, we used DArTseq in a large phylogeographic study of the agamid lizard Ctenophorus caudicinctus, including 91 individuals and spanning the geographical range of this species across arid Australia. A low-density DArTseq assay resulted in 28 960 SNPs, with low density referring to a comparably reduced set of identified and sequenced markers as a cost-effective approach. Second, we applied this approach to an evolutionary genetics study of a classic frog hybrid zone (Litoria ewingii–Litoria paraewingi) across 93 individuals, which resulted in 48 117 and 67 060 SNPs for a low- and high-density assay, respectively. We provide a docker-based workflow to facilitate data preparation and analysis, then analyse SNP data using multiple methods including Bayesian model-based clustering and conditional likelihood approaches. Based on comparison of results from the DArTseq platform and traditional molecular approaches, we conclude that DArTseq can be used successfully in vertebrates and will be of particular interest to researchers working at the interface between population genetics and phylogenetics, exploring species boundaries, gene exchange and hybridization. © 2017 The Authors

Birds orient their heads appropriately in response to functionally referential alarm calls of heterospecifics

Vertebrate alarm calls signal danger and often encode graded or categorical information about predator proximity or type. In addition to allowing communication with conspecifics, alarm calls are a valuable source of information for eavesdropping heterospecifics. However, although eavesdropping has been experimentally demonstrated in over 70 species, we know little about exactly what information eavesdroppers gain from heterospecific alarm calls. Here, we investigated whether Australian magpies, Cracticus tibicen, extract relevant information about the type of threat from functionally referential alarm calls given by noisy miners, Manorina melanocephala. Miner aerial alarm calls signal a predator in flight, whereas mobbing calls signal a terrestrial or perched predator. We therefore tested whether magpies gain information on the elevation of expected danger. We first confirmed, by measuring bill angles on video, that magpie head orientation changes appropriately with differences in the elevation of a conspicuous moving object. We then conducted a field experiment that measured magpie bill angle in response to playback of miner aerial and mobbing alarm calls. The maximum and mean bill angles were higher in response to aerial than to mobbing calls, suggesting that magpies use information from miner alarms to search visually at appropriate elevations for the specific type of danger. Magpies were also vigilant for longer after aerial alarm calls that followed mobbing calls, implying perception of an escalating threat level. Our work shows that individuals can gain information on the type or location of danger from heterospecific alarm calls, which is likely to increase the effectiveness of antipredator responses. © 201

Interprofessional collaborative practice within cancer teams: Translating evidence into action. A mixed methods study protocol

<p>Abstract</p> <p>Background</p> <p>A regional integrated cancer network has implemented a program (educational workshops, reflective and mentoring activities) designed to support the uptake of evidence-informed interprofessional collaborative practices (referred to in this text as EIPCP) within cancer teams. This research project, which relates to the Registered Nurses' Association of Ontario (RNAO) Best Practice Guidelines and other sources of research evidence, represents a unique opportunity to learn more about the factors and processes involved in the translation of evidence-based recommendations into professional practices. The planned study seeks to address context-specific challenges and the concerns of nurses and other stakeholders regarding the uptake of evidence-based recommendations to effectively promote and support interprofessional collaborative practices.</p> <p>Aim</p> <p>This study aims to examine the uptake of evidence-based recommendations from best practice guidelines intended to enhance interprofessional collaborative practices within cancer teams.</p> <p>Design</p> <p>The planned study constitutes a practical trial, defined as a trial designed to provide comprehensive information that is grounded in real-world healthcare dynamics. An exploratory mixed methods study design will be used. It will involve collecting quantitative data to assess professionals' knowledge and attitudes, as well as practice environment factors associated with effective uptake of evidence-based recommendations. Semi-structured interviews will be conducted concurrently with care providers to gather qualitative data for describing the processes involved in the translation of evidence into action from both the users' (n = 12) and providers' (n = 24) perspectives. The Graham <it>et al. </it>Ottawa Model of Research Use will serve to construct operational definitions of concepts, and to establish the initial coding labels to be used in the thematic analysis of the qualitative data. Quantitative and qualitative results will be merged during interpretation to provide complementary perspectives of interrelated contextual factors that enhance the uptake of EIPCP and changes in professional practices.</p> <p>Discussion</p> <p>The information obtained from the study will produce new knowledge on the interventions and sources of support most conducive to the uptake of evidence and building of capacity to sustain new interprofessional collaborative practice patterns. It will provide new information on strategies for overcoming barriers to evidence-informed interventions. The findings will also pinpoint critical determinants of 'what works and why' taking into account the interplay between evidence, operational, relational micro-processes of care, uniqueness of patients' needs and preferences, and the local context.</p

For the sake of resilience and multifunctionality, let's diversify planted forests!

As of 2020, the world has an estimated 290 million ha of planted forests and this number is continuously increasing. Of these, 131 million ha are monospecific planted forests under intensive management. Although monospecific planted forests are important in providing timber, they harbor less biodiversity and are potentially more susceptible to disturbances than natural or diverse planted forests. Here, we point out the increasing scientific evidence for increased resilience and ecosystem service provision of functionally and species diverse planted forests (hereafter referred to as diverse planted forests) compared to monospecific ones. Furthermore, we propose five concrete steps to foster the adoption of diverse planted forests: (1) improve awareness of benefits and practical options of diverse planted forests among land-owners, managers, and investors; (2) incentivize tree species diversity in public funding of afforestation and programs to diversify current maladapted planted forests of low diversity; (3) develop new wood-based products that can be derived from many different tree species not yet in use; (4) invest in research to assess landscape benefits of diverse planted forests for functional connectivity and resilience to global-change threats; and (5) improve the evidence base on diverse planted forests, in particular in currently under-represented regions, where new options could be tested

Coping with a changing soundscape: avoidance, adjustments and adaptations

Since the industrial age, background anthropogenic noise has become a pervasive feature of many habitable environments. This relatively recent environmental feature can be particularly challenging for organisms that use acoustic forms of communication due to its propensity for masking and decreasing the potential acoustic space of signals. Furthermore, anthropogenic noise may affect biological processes including animal interactions, physiological and behavioural responses to stimuli and cognitive development. However, animals' cognitive abilities may enable them to cope with high levels of anthropogenic noise through learning, the employment of acoustic and behavioural flexibility as well as the use of multi-modal sensory systems. We are only just beginning to understand how neural structures, endocrine systems and behaviour are mechanistically linked in these scenarios, providing us with information we can use to mitigate deleterious effects of pervasive noise on wildlife, along with highlighting the remarkable adaptability of animals to an increasingly anthropogenic world. In this review, I will focus mainly on birds, due to the amount of literature on the topic, and survey recent advancements made in two main spheres: (1) how anthropogenic noise affects cognitive processes and (2) how cognition enables animals to cope with increasingly noisy environments. I will be highlighting current gaps in our knowledge, such as how noise might impact behavioural traits such as predation, as well as how noise causes physical damage to neurotransmitters and affects stress levels, in order to direct future studies on this topic

See, Hear, Speak... Using Non-traditional Assessment Techniques in Undergraduate-level Biology Courses

While teaching to multiple learning styles (visual, auditory, kinesthetic, and tactile learning) has become more common in Science classrooms, assessments are often unchanged and generally delivered in traditional written formats. Since not every student's strength lies in such assessment methods, it is important to recognize the variety of ways in which we can evaluate learning in order to be more inclusive of student abilities. Even though biology coursework may not seem to lend itself to non-traditional testing, there are many opportunities to do so. These types of assessments actively engage students and allow them to sharpen a broader range of strengths. This workshop, aimed at early-career undergraduate instructors (graduate students and postdoctoral fellows), will encourage participants to design non-traditional assessments for their biology courses

To filter or not to filter : assessing the exclusion of hunting and persecution data in ringing recovery studies

In recent years, ringing recovery records in Europe have been identified as a potential important source of data for assessing the impact of climate change and other long-term changes on wintering population distributions of migrating birds. As with any voluntarily-gathered data, however, there are clear sources of bias that might impact results if researchers are not selective. Conversely, methods that exclude data should not be universally applied without proper assessment of their impact on final results. We examine the specific and seemingly conventional method of excluding data collected from hunted or intentionally killed individuals in studies of winter distributions of migrating European birds, to evaluate whether the exclusion or inclusion of this data does indeed affect the outcome of the analysis. We find that the exclusion of these data is warranted for many species, however may impact the power of statistical analyses unjustifiably for others. Our findings showed that wintering range sizes of species are similar when using data of killed or non-killed birds, although there may be latitudinal differences. Furthermore, we did not find evidence that wintering ranges of investigated 37 species would have moved northwards in general as would have been expected due to climate change. We suggest that rather than a universally-applied method of exclusion, these contributed data should be analyzed in context of the hunting history of the species in question and the time frame being considered, and give guidelines on how to most efficiently utilize this important data resource.Peer reviewe