133 research outputs found

    Schwierigkeiten Àsthetischer Bildung : mit stÀndigem Blick auf die kritische Theorie Theodor W. Adornos

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    Mit Blick auf Theodor W. Adornos ‚Negative Dialektik' und ‚Ästhetische Theorie' wird das VerhĂ€ltnis von Natur, Gesellschaft und Kunst im Kontext einer Ă€sthetischen Bildung geklĂ€rt. Methodisch wird dabei so verfahren, dass die kritische Theorie insbesondere Adornos in unterschiedliche Konstellationen zu Problemstellungen, TheorieentwĂŒrfen, Kunstwerken und Interpretationen gebracht wird. Die Intention dabei ist, so Einsicht in theoretische ZusammenhĂ€nge, in die Beziehung von Kunst und RealitĂ€t, in die Probleme der Theoretisierung von Kunst wie auch insbesondere in die Schwierigkeiten Ă€sthetischer Bildung zu gewinnen. Die systematische Reflexion theoretischer Kategorien und die modellhafte Deutung Ă€sthetischer Produktion werden sich weniger wechselseitig illustrieren als vielmehr illuminieren. Mit Exkursionen ins Material Ă€sthetischer Ausdrucksgestalten auf der Hintergrundfolie der Begriffe Tod, Eros und Schicksal werden Symbolisierungsformen und Symptome alltagsreligiöser Überzeugungen in der Memorialkunst, der Ars amatoria in Bizets Oper Carmen und der Rezeptionsgeschichte des Nibelungenliedes analysiert, die Metamorphosen der Wirklichkeit in ihrer möglichen Ästhetisierung dargelegt und deren Relation zu einer kritischen Ă€sthetischen Bildung vorbereitet. Der ‚böse' soziologische und der ‚leuchtende' Ă€sthetische Blick verbinden sich zu den ‚Schwierigkeiten Ă€sthetischer Bildung', die anhand der avancierten Theoriekonzeptionen Ă€sthetischer Bildung von Klaus Mollenhauer und Karl-Josef Pazzini offen gelegt werden

    Simultaneous regression and classification for drug sensitivity prediction using an advanced random forest method

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    Machine learning methods trained on cancer cell line panels are intensively studied for the prediction of optimal anti-cancer therapies. While classifcation approaches distinguish efective from inefective drugs, regression approaches aim to quantify the degree of drug efectiveness. However, the high specifcity of most anti-cancer drugs induces a skewed distribution of drug response values in favor of the more drug-resistant cell lines, negatively afecting the classifcation performance (class imbalance) and regression performance (regression imbalance) for the sensitive cell lines. Here, we present a novel approach called SimultAneoUs Regression and classifcatiON Random Forests (SAURON-RF) based on the idea of performing a joint regression and classifcation analysis. We demonstrate that SAURON-RF improves the classifcation and regression performance for the sensitive cell lines at the expense of a moderate loss for the resistant ones. Furthermore, our results show that simultaneous classifcation and regression can be superior to regression or classifcation alone

    Encoding via conjugate symmetries of slow oscillations for globally coupled oscillators

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    Peter Ashwin and Jon Borresen, Physical Review E, Vol. 70, p. 026203 (2004). "Copyright © 2004 by the American Physical Society."We study properties of the dynamics underlying slow cluster oscillations in two systems of five globally coupled oscillators. These slow oscillations are due to the appearance of structurally stable heteroclinic connections between cluster states in the noise-free dynamics. In the presence of low levels of noise they give rise to long periods of residence near cluster states interspersed with sudden transitions between them. Moreover, these transitions may occur between cluster states of the same symmetry, or between cluster states with conjugate symmetries given by some rearrangement of the oscillators. We consider the system of coupled phase oscillators studied by Hansel et al. [Phys. Rev. E 48, 3470 (1993)] in which one can observe slow, noise-driven oscillations that occur between two families of two cluster periodic states; in the noise-free case there is a robust attracting heteroclinic cycle connecting these families. The two families consist of symmetric images of two inequivalent periodic orbits that have the same symmetry. For N=5 oscillators, one of the periodic orbits has one unstable direction and the other has two unstable directions. Examining the behavior on the unstable manifold for the two unstable directions, we observe that the dimensionality of the manifold can give rise to switching between conjugate symmetry orbits. By applying small perturbations to the system we can easily steer it between a number of different marginally stable attractors. Finally, we show that similar behavior occurs in a system of phase-energy oscillators that are a natural extension of the phase model to two dimensional oscillators. We suggest that switching between conjugate symmetries is a very efficient method of encoding information into a globally coupled system of oscillators and may therefore be a good and simple model for the neural encoding of information

    Exploring the impact of trait number and type on functional diversity metrics in real-world ecosystems

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    The use of trait-based approaches to understand ecological communities has increased in the past two decades because of their promise to preserve more information about community structure than taxonomic methods and their potential to connect community responses to subsequent effects of ecosystem functioning. Though trait-based approaches are a powerful tool for describing ecological communities, many important properties of commonly-used trait metrics remain unexamined. Previous work in studies that simulate communities and trait distributions show consistent sensitivity of functional richness and evenness measures to the number of traits used to calculate them, but these relationships have yet to be studied in actual plant communities with a realistic distribution of trait values, ecologically meaningful covariation of traits, and a realistic number of traits available for analysis. Therefore, we propose to test how the number of traits used and the correlation between traits used in the calculation of functional diversity indices impacts the magnitude of eight functional diversity metrics in real plant communities. We will use trait data from three grassland plant communities in the US to assess the generality of our findings across ecosystems and experiments. We will determine how eight functional diversity metrics (functional richness, functional evenness, functional divergence, functional dispersion, kernel density estimation (KDE) richness, KDE evenness, KDE dispersion, Rao's Q) differ based on the number of traits used in the metric calculation and on the correlation of traits when holding the number of traits constant. Without a firm understanding of how a scientist's choices impact these metric, it will be difficult to compare results among studies with different metric parametrization and thus, limit robust conclusions about functional composition of communities across systems

    Phorbol-12-myristate-13-acetate is a potent enhancer of B cells with a granzyme B+ regulatory phenotype

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    IntroductionThe infusion of ex-vivo-generated regulatory B cells may represent a promising novel therapeutic approach for a variety of autoimmune and hyperinflammatory conditions including graft-versus-host disease.MethodsPreviously, we developed a protocol for the generation of a novel population of regulatory B cells, which are characterized by secretion of enzymatically active granzyme B (GraB cells). This protocol uses recombinant interleukin 21 (IL-21) and goat-derived F(ab)’2 fragments against the human B cell receptor (anti-BCR). Generally, the use of xenogeneic material for the manufacturing of advanced therapy medicinal products should be avoided to prevent adverse immune reactions as well as potential transmission of so far unknown diseases.ResultsIn the present work we demonstrated that phorbol-12-myristate-13-acetate (PMA/TPA), a phorbol ester with a particular analogy to the second messenger diacylglycerol (DAG), is a potent enhancer of IL-21-induced differentiation of pre-activated B cells into GraB cells. The percentage of GraB cells after stimulation of pre-activated B cells with IL-21 and PMA/TPA was not significantly lower compared to stimulation with IL-21 and anti-BCR.DiscussionGiven that PMA/TPA has already undergone encouraging clinical testing in patients with certain haematological diseases, our results suggest that PMA/TPA may be a safe and feasible alternative for ex-vivo manufacturing of GraB cells

    A New Monte Carlo Algorithm for Protein Folding

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    We demonstrate that the recently proposed pruned-enriched Rosenbluth method (P. Grassberger, Phys. Rev. E 56 (1997) 3682) leads to extremely efficient algorithms for the folding of simple model proteins. We test them on several models for lattice heteropolymers, and compare to published Monte Carlo studies. In all cases our algorithms are faster than all previous ones, and in several cases we find new minimal energy states. In addition to ground states, our algorithms give estimates for the partition sum at finite temperatures.Comment: 4 pages, Latex incl. 3 eps-figs., submitted to Phys. Rev. Lett., revised version with changes in the tex

    changeRangeR: An R package for reproducible biodiversity change metrics from species distribution estimates

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    Conservation planning and decision-making rely on evaluations of biodiversity status and threats that are based upon species' distribution estimates. However, gaps exist regarding automated tools to delineate species' current ranges from distribution estimates and use those estimates to calculate both species- and community-level biodiversity metrics. Here, we introduce changeRangeR, an R package that facilitates workflows to reproducibly transform estimates of species' distributions into metrics relevant for conservation. For example, by combining predictions from species distribution models (SDMs) with other maps of environmental data (e.g., suitable forest cover), researchers can characterize the proportion of a species' range that is under protection, metrics used under the IUCN Criteria A and B guidelines (Area of Occupancy and Extent of Occurrence), and other more general metrics such as taxonomic and phylogenetic diversity and endemism. Further, changeRangeR facilitates temporal comparisons among biodiversity metrics to inform efforts toward complementarity and consideration of future scenarios in conservation decisions. changeRangeR also provides tools to determine the effects of modeling decisions through sensitivity tests. Transparent and repeatable workflows for calculating biodiversity change metrics from SDMs such as those provided by changeRangeR are essential to inform conservation decision-making efforts and represent key extensions for SDM methodology and associated metadata documentation.journal articl

    GeneTrail 3: advanced high-throughput enrichment analysis

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    We present GeneTrail 3, a major extension of our web service GeneTrail that offers rich functionality for the identification, analysis, and visualization of deregulated biological processes. Our web service provides a comprehensive collection of biological processes and signaling pathways for 12 model organisms that can be analyzed with a powerful framework for enrichment and network analysis of transcriptomic, miRNomic, proteomic, and genomic data sets. Moreover, GeneTrail offers novel workflows for the analysis of epigenetic marks, time series experiments, and single cell data. We demonstrate the capabilities of our web service in two case-studies, which highlight that GeneTrail is well equipped for uncovering complex molecular mechanisms. GeneTrail is freely accessible at: http://genetrail.bioinf.uni-sb.de

    REGGAE: a novel approach for the identification of key transcriptional regulators

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    Motivation: Transcriptional regulators play a major role in most biological processes. Alterations in their activities are associated with a variety of diseases and in particular with tumor development and progres sion. Hence, it is important to assess the effects of deregulated regulators on pathological processes. Results: Here, we present REGulator-Gene Association Enrichment (REGGAE), a novel method for the identification of key transcriptional regulators that have a significant effect on the expression of a given set of genes, e.g. genes that are differentially expressed between two sample groups. REGGAE uses a Kolmogorov–Smirnov-like test statistic that implicitly combines associations be tween regulators and their target genes with an enrichment approach to prioritize the influence of transcriptional regulators. We evaluated our method in two different application scenarios, which demonstrate that REGGAE is well suited for uncovering the influence of transcriptional regulators and is a valuable tool for the elucidation of complex regulatory mechanisms

    ClinOmicsTrailbc: a visual analytics tool for breast cancer treatment stratification

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    Motivation: Breast cancer is the second leading cause of cancer death among women. Tumors, even of the same histopathological subtype, exhibit a high genotypic diversity that impedes therapy stratification and that hence must be accounted for in the treatment decision-making process. Results: Here, we present ClinOmicsTrailbc, a comprehensive visual analytics tool for breast cancer decision support that provides a holistic assessment of standard-of-care targeted drugs, candidates for drug repositioning and immunotherapeutic approaches. To this end, our tool analyzes and visualizes clinical markers and (epi-)genomics and transcriptomics datasets to identify and evaluate the tumor’s main driver mutations, the tumor mutational burden, activity patterns of core cancerrelevant pathways, drug-specific biomarkers, the status of molecular drug targets and pharmacogenomic influences. In order to demonstrate ClinOmicsTrailbc’s rich functionality, we present three case studies highlighting various ways in which ClinOmicsTrailbc can support breast cancer precision medicine. ClinOmicsTrailbc is a powerful integrated visual analytics tool for breast cancer research in general and for therapy stratification in particular, assisting oncologists to find the best possible treatment options for their breast cancer patients based on actionable, evidence-based results. Availability and implementation: ClinOmicsTrailbc can be freely accessed at https://clinomicstrail. bioinf.uni-sb.de
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