Characterisation of dairy soiled water in a survey of 60 Irish dairy farms

peer-reviewedDairy farming in Ireland generates an effluent known as dairy soiled water (DSW), which consists of a relatively dilute mixture of cow faeces, urine, spilt milk and detergents that is typically applied to grassland. However, relatively little is known about the volumes generated, nutrient content and management factors that influence volume and concentration. Sixty dairy farms that had a separate storage tank for storing DSW were selected for this study. The spatial distribution of the farms reflected the spatial distribution of dairy cows across the 26 counties of the Republic of Ireland, with each farm representing between 10,000 and 20,000 dairy cows. Samples were analysed for biochemical oxygen demand (BOD), ammonium N (NH4-N), total nitrogen (TN), potassium (K), phosphorus (molybdate-reactive and total) (MRP and TP) and dry matter (DM) content. Management characteristics and parlour properties were quantified. Factors influencing volume and concentration of DSW were determined using mixed model multiple regression analysis. On average, 9784 l (standard error 209 l) of DSW, including rainfall, was produced cow−1 year−1 and this contained significant quantities of total N, P and K (587, 80 and 568 mg l−1, respectively). A typical Irish dairy farm stocked at 1.9 cows ha−1 could therefore supply approximately 13, 2 and 12 kg ha−1 of total N, P and K, respectively, across the farm, annually to meet some of the nutrient requirements for herbage production and potentially replace some of the synthetic fertilizer use. Seventy one percent of samples were within the regulated concentration limits of soiled water for BOD (<2500 mg l−1), rising to 87% during the closed period for slurry spreading (mid October to mid-late January), while 81% were within the concentration limits for DM (<1% DM), rising to 94% during the closed period. The efficiency of a milking parlour (cows per unit, time taken) plays a key role in determining the volume of DSW generated. This, in turn, also influences the concentration of nutrients and other chemicals. Large variability was found in nutrient concentrations and this presents a challenge for effective nutrient management to maximise the fertilizer replacement value of DSW

A study of faculty perceptions and engagement with interdisciplinary research in university sustainability institutes

It has long been argued that solutions to inform better decisions on environmental challenges require research at the boundaries of scientific disciplines. Research institutes and centers at universities can be key vehicles for the convergence of scientists from multiple disciplines and the development of integrated, interdisciplinary knowledge. Through a survey of over two hundred faculty in three sustainability research institutes based in the USA, this study explored faculty perceptions of interdisciplinary research, their levels of engagement in interdisciplinary work, and how they view the role of the research institute in enabling interdisciplinary research. The investigation shows that over 95% of faculty at the institutes studied are carrying out research with colleagues outside their own discipline, with half of the faculty spending more than two-thirds of their time on interdisciplinary work. Over half of faculty members are engaging in long-distance interdisciplinary research across the natural-social sciences boundary which is seen as crucial for sustainability science. The research institutes are having a positive influence on facilitating interdisciplinarity with more than four out of five faculty indicating that the institute has enabled interdisciplinary research opportunities that would have not have been possible in their home school. The opportunity to engage in interdisciplinary research is among the most important reasons for faculty to join institutes. While limited to three institutes, the study provides robust evidence for the powerfully beneficial role that research institutes can play as enablers on interdisciplinary research within their university

VALIDITY OF A TREADMILL-MOUNTED PHOTOELECTRIC SYSTEM FOR MEASURING SPATIOTEMPORAL PARAMETERS OVER A RANGE OF RUNNING SPEEDS

The purpose of this study was to determine the concurrent validity of a treadmill-mounted photoelectric system (Optojump) for measuring spatiotemporal parameters of runners at a range of running speeds (12-16 km/h). Ten participants ran for 20 s at each of three different speeds (12, 14 and 16 km/h) on a HP Cosmos Pulsar treadmill while spatiotemporal parameters were measured by both the Optojump and a high-speed camera (960 fps). The Optojump was placed on the sides of the treadmill as per the manufacturer protocols. Large timing errors for contact time (13.1%) and swing time (6.8%) were recorded, while excellent validity was shown for the other parameters of stride time, stride length and stride frequency (errors less than 0.6%). Increases in gait speed resulted in significantly lower error values for both contact time and swing time, but had no effect on the other variables. Early identification of initial contact and delayed identification of toe-off in the Optojump system due to placement on the slightly elevated sides of the treadmill are hypothesised to be the cause of the notable errors in contact time and swing time. However, these systematic errors do not negatively affect the other spatiotemporal parameters of stride time, stride length and stride frequency which are all still accurately measured by the Optojump in this set-u

Better together: knowledge co-production for a sustainable society

This Royal Irish Academy white paper, ‘Better together: Knowledge co-production for a sustainable society’, provides an overview of knowledge co-production for sustainability and environmental research in Ireland; highlights the benefits and challenges of co-production approaches; and identifies key levers for building capacity and capability for knowledge co-production. The paper draws on almost 50 case studies of co-production research for sustainability, along with the outputs from the online Royal Irish Academy symposium and workshop ‘Better together: Knowledge co-production for a sustainable society’, which took place on 3 June 2021. Short summaries of the case studies are included in this white paper

Physical activity after cardiac rehabilitation: Explicit and implicit attitudinal components and ambivalence

Objective: Physical activity is crucial in the treatment of cardiac disease. In addition to sociocognitive theories of behavior change, attitudinal ambivalence and nonconscious factors have also been demonstrated to predict physical activity. We propose an extension to the theory of planned behavior with a dual-systems approach including explicit and implicit attitudes, and different types of attitudinal ambivalence as moderators to predict the physical activity of patients after discharge from inpatient cardiac rehabilitation. Method: The sample comprised N = 111 cardiac patients who provided daily diary reports of intention, cognitive, affective, and implicit attitudes for 21 days after discharge (86% male, Mage = 62, SDage = 11, n = 2,017 days). Daily moderate–to-vigorous (MVPA) and light (LPA) physical activity were measured using accelerometers. Five types of ambivalence were calculated. Analyses included Bayesian multilevel modeling. Results: Patients with more positive affective attitudes and more positive implicit attitudes had a higher intention. Higher ambivalence weakened the affective attitudes-intention relationship. On days with more positive implicit attitudes than usual, intention was lower, but only when ambivalence was low. Patients with higher ambivalence engaged in less MVPA. On days with extremely low ambivalence, implicit attitudes were negatively associated with tomorrow’s MVPA. Patients with more positive affective attitudes engaged in more LPA, but only when their ambivalence was very low. On days with higher ambivalence than usual, the next day’s LPA was shorter. However, another type of ambivalence showed the opposite effect. Conclusions: The results emphasize the importance of affective and implicit attitudes and ambivalence for the physical activity of cardiac patients

Social Work and Human Rights:The International Context

This publication is a companion to ‘Social Work and Human Rights: A Practice Guide’. Both publications can be read separately or together. To maintain continuity between the two the numbering of ‘Social Work and Human Rights: The International Context’ starts where ‘Social Work and Human Rights: A Practice Guide’ ends and thus this publication starts at Section 13. Social work is an international profession and human rights in the UK are set in the context of international laws and treaties. Section 13 covers the development of human rights in an international context, Section 14 examines the contemporary global challenges of human rights while Section 15 concludes with emerging thinking on human rights development and practice

Ice nucleating particles carried from below a phytoplankton bloom to the arctic atmosphere

Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(14), (2019): 8572-8581, doi: 10.1029/2019GL083039.As Arctic temperatures rise at twice the global rate, sea ice is diminishing more quickly than models can predict. Processes that dictate Arctic cloud formation and impacts on the atmospheric energy budget are poorly understood, yet crucial for evaluating the rapidly changing Arctic. In parallel, warmer temperatures afford conditions favorable for productivity of microorganisms that can effectively serve as ice nucleating particles (INPs). Yet the sources of marine biologically derived INPs remain largely unknown due to limited observations. Here we show, for the first time, how biologically derived INPs were likely transported hundreds of kilometers from deep Bering Strait waters and upwelled to the Arctic Ocean surface to become airborne, a process dependent upon a summertime phytoplankton bloom, bacterial respiration, ocean dynamics, and wind‐driven mixing. Given projected enhancement in marine productivity, combined oceanic and atmospheric transport mechanisms may play a crucial role in provision of INPs from blooms to the Arctic atmosphere.We sincerely thank the U.S. Coast Guard and crew of the Healy for assistance with equipment installation and guidance, operation of the underway and CTD systems, and general operation of the vessel during transit and at targeted sampling stations. We would also like to thank Allan Bertram, Meng Si, Victoria Irish, and Benjamin Murray for providing INP data from their previous studies. J. M. C., R. P., P. L., L. T., and E. B. were funded by the National Oceanic and Atmospheric Administration (NOAA)’s Arctic Research Program. J. C. was supported by the NOAA Experiential Research & Training Opportunities (NERTO) program. T. A. and N. C. were supported through the NOAA Earnest F. Hollings Scholarship program. A. P. was funded by the National Science Foundation under Grant PLR‐1303617. Russel C. Schnell and Michael Spall are acknowledged for insightful discussions during data analysis and interpretation. There are no financial conflicts of interest for any author. INP data are available in the supporting information, while remaining DBO‐NCIS data presented in the manuscript are available online (at https://www2.whoi.edu/site/dboncis/).2020-01-1

Understanding how institutions may support the development of transdisciplinary approaches to sustainability research

This article analyses the approaches of academics seeking to engage with private, public and community-based stakeholders through transdisciplinary research about pressing sustainability challenges and, in particular, climate change; it outlines aspects of the institutional factors which influence transdisciplinary research. A qualitative approach was employed in conducting 10 semi-structured interviews to analyse the challenges and motivations of academic researchers when working with a range of other stakeholders through transdisciplinary practice. Two key contributions are made through this work. First, this article adds to the existing literature on motivations and challenges for undertaking research with private, public and community stakeholders in a cross-disciplinary manner. Second, the current institutional circumstances influencing such research practices are outlined, alongside potential ways forward. The research presented here has been undertaken in light of the experiences of the two lead co-authors as early career researchers coming from the disciplines of sociology and energy engineering, engaging in transdisciplinary research within a local community context in relation to a regional energy transition project

Comparative Genomics of Cyanobacterial Symbionts Reveals Distinct, Specialized Metabolism in Tropical Dysideidae Sponges.

Marine sponges are recognized as valuable sources of bioactive metabolites and renowned as petri dishes of the sea, providing specialized niches for many symbiotic microorganisms. Sponges of the family Dysideidae are well documented to be chemically talented, often containing high levels of polyhalogenated compounds, terpenoids, peptides, and other classes of bioactive small molecules. This group of tropical sponges hosts a high abundance of an uncultured filamentous cyanobacterium, Hormoscilla spongeliae Here, we report the comparative genomic analyses of two phylogenetically distinct Hormoscilla populations, which reveal shared deficiencies in essential pathways, hinting at possible reasons for their uncultivable status, as well as differing biosynthetic machinery for the production of specialized metabolites. One symbiont population contains clustered genes for expanded polybrominated diphenylether (PBDE) biosynthesis, while the other instead harbors a unique gene cluster for the biosynthesis of the dysinosin nonribosomal peptides. The hybrid sequencing and assembly approach utilized here allows, for the first time, a comprehensive look into the genomes of these elusive sponge symbionts.IMPORTANCE Natural products provide the inspiration for most clinical drugs. With the rise in antibiotic resistance, it is imperative to discover new sources of chemical diversity. Bacteria living in symbiosis with marine invertebrates have emerged as an untapped source of natural chemistry. While symbiotic bacteria are often recalcitrant to growth in the lab, advances in metagenomic sequencing and assembly now make it possible to access their genetic blueprint. A cell enrichment procedure, combined with a hybrid sequencing and assembly approach, enabled detailed genomic analysis of uncultivated cyanobacterial symbiont populations in two chemically rich tropical marine sponges. These population genomes reveal a wealth of secondary metabolism potential as well as possible reasons for historical difficulties in their cultivation

International meta-analysis of PTSD genome-wide association studies identifies sex- and ancestry-specific genetic risk loci.

The risk of posttraumatic stress disorder (PTSD) following trauma is heritable, but robust common variants have yet to be identified. In a multi-ethnic cohort including over 30,000 PTSD cases and 170,000 controls we conduct a genome-wide association study of PTSD. We demonstrate SNP-based heritability estimates of 5-20%, varying by sex. Three genome-wide significant loci are identified, 2 in European and 1 in African-ancestry analyses. Analyses stratified by sex implicate 3 additional loci in men. Along with other novel genes and non-coding RNAs, a Parkinson's disease gene involved in dopamine regulation, PARK2, is associated with PTSD. Finally, we demonstrate that polygenic risk for PTSD is significantly predictive of re-experiencing symptoms in the Million Veteran Program dataset, although specific loci did not replicate. These results demonstrate the role of genetic variation in the biology of risk for PTSD and highlight the necessity of conducting sex-stratified analyses and expanding GWAS beyond European ancestry populations