Excited-state calculations with quantum Monte Carlo

Quantum Monte Carlo methods are first-principle approaches that approximately solve the Schr\"odinger equation stochastically. As compared to traditional quantum chemistry methods, they offer important advantages such as the ability to handle a large variety of many-body wave functions, the favorable scaling with the number of particles, and the intrinsic parallelism of the algorithms which are particularly suitable to modern massively parallel computers. In this chapter, we focus on the two quantum Monte Carlo approaches most widely used for electronic structure problems, namely, the variational and diffusion Monte Carlo methods. We give particular attention to the recent progress in the techniques for the optimization of the wave function, a challenging and important step to achieve accurate results in both the ground and the excited state. We conclude with an overview of the current status of excited-state calculations for molecular systems, demonstrating the potential of quantum Monte Carlo methods in this field of applications

Plasma–liquid interactions: a review and roadmap

Plasma–liquid interactions represent a growing interdisciplinary area of research involving plasma science, fluid dynamics, heat and mass transfer, photolysis, multiphase chemistry and aerosol science. This review provides an assessment of the state-of-the-art of this multidisciplinary area and identifies the key research challenges. The developments in diagnostics, modeling and further extensions of cross section and reaction rate databases that are necessary to address these challenges are discussed. The review focusses on non-equilibrium plasmas

Composition and morphology of the follicular basal lamina during atresia of bovine antral follicles

The fate of the follicular basal lamina during atresia was investigated using bovine follicles, in which different follicle phenotypes have been observed. These phenotypes include: healthy follicles with rounded basal granulosa cells with an aligned basal lamina or follicles with columnar basal granulosa cells with a basal lamina of many loops (loopy), and atretic follicles in which either the antral granulosa cells (antral atresia) or the basal cells (basal atresia) die first. Loopy lamina and basal atresia occur only in small antral follicles \u3c 5 mm in diameter. Follicles were collected from cattle of unknown reproductive history and processed for immunohistochemistry and electron microscopy, and from animals in which follicle growth had been monitored by daily measurements of follicle diameter by ultrasonography. Electron microscopic observations of dominant follicles during the growth phase, plateau and regression showed that the basal lamina was still visible and intact upon atresia. These follicles had a conventional aligned basal lamina, which they retained, except for some degree of folding, as they progressed into antral atresia. In small follicles (2–5 mm in diameter), the basal cell shape (rounded or columnar) and appearance of the basal lamina (aligned or of many loops) did not appear to be related to the type of atresia. On atresia the follicular basal laminae retained immunoreactive laminin α1 and β2, type IV collagen a1 and nidogen. Laminin α2, which may come from the theca, was present in the follicular basal lamina of only 22% of healthy follicles, but was expressed very commonly in 71% of the atretic follicles. Laminin α2 expression was found in both phenotypes of healthy follicles, antral and basal atretic follicles, and follicles with aligned or loopy basal laminae. It is concluded that the basal lamina is not degraded upon atresia, but does undergo a variety of other changes

Comparative Response of Rams and Bulls to Long-Term Treatment with Gonadotropin-Releasing Hormone Analogs

The objective was to compare the relative response between rams and bulls in characteristics of LH, FSH and testosterone (T) secretion, during and after long-term treatment with GnRH analogs. Animals were treated with GnRH agonist, GnRH antagonist, or vehicle (Control) for 28 days. Serial blood samples were collected on day 21 of treatment, and at several intervals after treatment. Injections of natural sequence GnRH were used to evaluate the capacity of the pituitary to release gonadotropins during and after treatment. Treatment with GnRH agonist increased basal LH and T concentrations in both rams and bulls, with a greater relative increase in bulls. Endogenous LH pulses and LH release after administration of GnRH were suppressed during treatment with GnRH agonist. Treatment with GnRH antagonist decreased mean hormone concentrations, LH and T pulse frequency, and the release of LH and T after exogenous GnRH, with greater relative effects in bulls. Rams previously treated with antagonist had a greater release of LH after administration of GnRH compared with control rams, while rams previously treated with agonist showed a reduced LH response. Bulls previously treated with agonist had reduced FSH concentrations and LH pulse amplitudes compared with control bulls while bulls previously treated with antagonist had greater T concentrations and pulse frequency. The present study was the first direct comparison between domestic species of the response in males to treatment with GnRH analogs. The findings demonstrated that differences do occur between rams and bulls in LH, FSH and testosterone secretion during and after treatment. Also, the consequences of treatment with either GnRH analog can persist for a considerable time after discontinuation of treatment

Gaussian continuum basis functions for calculating high-harmonic generation spectra

The computation of high\u2010harmonic generation spectra by means of Gaussian basis sets in approaches propagating the time\u2010dependent Schr\uf6dinger equation was explored. The efficiency of Gaussian functions specifically designed for the description of the continuum proposed by Kaufmann et al. (J Phys B 1989, 22, 2223) was investigated. The range of applicability of this approach was assessed by studying the hydrogen atom, that is, the simplest atom for which \u201cexact\u201d calculations on a grid could be performed. The effect of increasing the basis set cardinal number, the number of diffuse basis functions, and the number of Gaussian pseudo\u2010continuum basis functions for various laser parameters was notably studied. The results showed that the latter significantly improved the description of the low\u2010lying continuum states, and provided a satisfactory agreement with grid calculations for laser wavelengths \u3bb0\u2009=\u2009800 and 1064 nm. The Kaufmann continuum functions, therefore, appeared as a promising way of constructing Gaussian basis sets for studying molecular electron dynamics in strong laser fields using time\u2010dependent quantum\u2010chemistry approaches. \ua9 2016 Wiley Periodicals, Inc