616 research outputs found

    The Chandra Dust Scattering Halo of Galactic Center transient Swift J174540.7-290015

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    We report the detection of a dust scattering halo around a recently discovered X-ray transient, Swift J174540.7-290015, which in early February of 2016 underwent one of the brightest outbursts (F_X ~ 5e-10 erg/cm^2/s) observed from a compact object in the Galactic Center field. We analyze four Chandra images that were taken as follow-up observations to Swift discoveries of new Galactic Center transients. After adjusting our spectral extraction for the effects of detector pileup, we construct a point spread function for each observation and compare it to the GC field before the outburst. We find residual surface brightness around Swift J174540.7-290015, which has a shape and temporal evolution consistent with the behavior expected from X-rays scattered by foreground dust. We examine the spectral properties of the source, which shows evidence that the object transitioned from a soft to hard spectral state as it faded below L_X ~ 1e36 erg/s. This behavior is consistent with the hypothesis that the object is a low mass X-ray binary in the Galactic Center.Comment: Accepted for publication in Ap

    Measures of genetic diversification in somatic tissues at bulk and single-cell resolution.

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    Intra-tissue genetic heterogeneity is universal to both healthy and cancerous tissues. It emerges from the stochastic accumulation of somatic mutations throughout development and homeostasis. By combining population genetics theory and genomic information, genetic heterogeneity can be exploited to infer tissue organization and dynamics in vivo. However, many basic quantities, for example the dynamics of tissue-specific stem cells remain difficult to quantify precisely. Here, we show that single-cell and bulk sequencing data inform on different aspects of the underlying stochastic processes. Bulk-derived variant allele frequency spectra (VAF) show transitions from growing to constant stem cell populations with age in samples of healthy esophagus epithelium. Single-cell mutational burden distributions allow a sample size independent measure of mutation and proliferation rates. Mutation rates in adult hematopietic stem cells are higher compared to inferences during development, suggesting additional proliferation-independent effects. Furthermore, single-cell derived VAF spectra contain information on the number of tissue-specific stem cells. In hematopiesis, we find approximately 2 Ă— 105 HSCs, if all stem cells divide symmetrically. However, the single-cell mutational burden distribution is over-dispersed compared to a model of Poisson distributed random mutations. A time-associated model of mutation accumulation with a constant rate alone cannot generate such a pattern. At least one additional source of stochasticity would be needed. Possible candidates for these processes may be occasional bursts of stem cell divisions, potentially in response to injury, or non-constant mutation rates either through environmental exposures or cell-intrinsic variation

    Measures of genetic diversification in somatic tissues at bulk and single-cell resolution

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    Intra-tissue genetic heterogeneity is universal to both healthy and cancerous tissues. It emerges from the stochastic accumulation of somatic mutations throughout development and homeostasis. By combining population genetics theory and genomic information, genetic heterogeneity can be exploited to infer tissue organization and dynamics in vivo. However, many basic quantities, for example the dynamics of tissue-specific stem cells remain difficult to quantify precisely. Here, we show that single-cell and bulk sequencing data inform on different aspects of the underlying stochastic processes. Bulk-derived variant allele frequency spectra (VAF) show transitions from growing to constant stem cell populations with age in samples of healthy esophagus epithelium. Single-cell mutational burden distributions allow a sample size independent measure of mutation and proliferation rates. Mutation rates in adult hematopietic stem cells are higher compared to inferences during development, suggesting additional proliferation-independent effects. Furthermore, single-cell derived VAF spectra contain information on the number of tissue-specific stem cells. In hematopiesis, we find approximately 2 Ă— 105 HSCs, if all stem cells divide symmetrically. However, the single-cell mutational burden distribution is over-dispersed compared to a model of Poisson distributed random mutations. A time-associated model of mutation accumulation with a constant rate alone cannot generate such a pattern. At least one additional source of stochasticity would be needed. Possible candidates for these processes may be occasional bursts of stem cell divisions, potentially in response to injury, or non-constant mutation rates either through environmental exposures or cell-intrinsic variation

    Properties of Interfaces in the two and three dimensional Ising Model

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    To investigate order-order interfaces, we perform multimagnetical Monte Carlo simulations of the 2D2D and 3D3D Ising model. Following Binder we extract the interfacial free energy from the infinite volume limit of the magnetic probability density. Stringent tests of the numerical methods are performed by reproducing with high precision exact 2D2D results. In the physically more interesting 3D3D case we estimate the amplitude F0sF^s_0 of the critical interfacial tension Fs=F0stμF^s = F^s_0 t^\mu to be F0s=1.52±0.05F^s_0 = 1.52 \pm 0.05. This result is in good agreement with a previous MC calculation by Mon, as well as with experimental results for related amplitude ratios. In addition, we study in some details the shape of the magnetic probability density for temperatures below the Curie point.Comment: 25 pages; sorry no figures include

    Spectral statistics of the k-body random-interaction model

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    We reconsider the question of the spectral statistics of the k-body random-interaction model, investigated recently by Benet, Rupp, and Weidenmueller, who concluded that the spectral statistics are Poissonian. The binary-correlation method that these authors used involves formal manipulations of divergent series. We argue that Borel summation does not suffice to define these divergent series without further (arbitrary) regularization, and that this constitutes a significant gap in the demonstration of Poissonian statistics. Our conclusion is that the spectral statistics of the k-body random-interaction model remains an open question.Comment: 17 pages, no figure

    A System in the Wild: Deploying a Two Player Arm Rehabilitation System for Children With Cerebral Palsy in a School Environment

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    This paper outlines a system for arm rehabilitation for children with upper-limb hemiplegia resulting from cerebral palsy. Our research team designed a two-player, interactive (competitive or collaborative) computer play therapy system that provided powered assistance to children while they played specially designed games that promoted arm exercises. We designed the system for a school environment. To assess the feasibility of deploying the system in a school environment, the research team enlisted the help of teachers and staff in nine schools. Once the system was set up, it was used to deliver therapy without supervision from the research team. Ultimately, the system was found to be suitable for use in schools. However, the overriding need for schools to focus on academic activities meant that children could not use the system enough to achieve the amount of use desired for therapeutic benefit. In this paper, we identify the key challenges encountered during this study. For example, there was a marked reluctance to report system issues (which could have been fixed) that prevented children from using the system. We also discuss future implications of deploying similar studies with this type of system

    Exact partition function of SU(m|n) supersymmetric Haldane-Shastry spin chain

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    By taking the freezing limit of a spin Calogero-Sutherland model containing `anyon like' representation of the permutation algebra, we derive the exact partition function of SU(m|n) supersymmetric Haldane-Shastry (HS) spin chain. This partition function allows us to study global properties of the spectrum like level density distribution and nearest neighbour spacing distribution. It is found that, for supersymmetric HS spin chains with large number of lattice sites, continuous part of the energy level density obeys Gaussian distribution with a high degree of accuracy. The mean value and standard deviation of such Gaussian distribution can be calculated exactly. We also conjecture that the partition function of supersymmetric HS spin chain satisfies a duality relation under the exchange of bosonic and fermionic spin degrees of freedom.Comment: Latex, 32 pages, 4 figures, minor typos corrected, to be published in Nucl. Phys.

    Investigating the association between early years foundation stage profile scores and subsequent diagnosis of an autism spectrum disorder: a retrospective study of linked healthcare and education data

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    Objective: We set out to test whether the early years foundation stage profile (EYFSP) score derived from 17 items assessed by teachers at the end of reception school year had any association with autism spectrum disorder (ASD) diagnosis in subsequent years. This study tested the feasibility of successfully linking education and health data. Design: A retrospective data linkage study. Setting and participants: The Born in Bradford longitudinal cohort of 13, 857 children. Outcome measures: We linked the EYFSP score at the end of reception year with subsequent diagnosis of an ASD, using all ASD general practitioner Read codes. We used the total EYFSP score and a subscore consisting of five key items in the EYFSP, prospectively identified using a panel of early years autism experts. Results: This study demonstrated the feasibility of linking education and health data using ASDs as an exemplar. A total of 8,935 children had linked primary care and education data with 20.7% scoring <25 on the total EYFSP and 15.2% scoring <10 on a EYFSP subscore proposed by an expert panel prospectively. The rate of diagnosis of ASDs at follow-up was just under 1% (84 children), children scoring <25 on the total EYFSP had a 4.1% chance of ASD compared with 0.15% of the remaining children. Using the prospectively designed subscore, this difference was greater (6.4% and 0.12%, respectively). Conclusions: We demonstrate the feasibility of linking education and health data. Performance on teacher ratings taken universally in school reception class can flag children at risk of ASDs. Further research is warranted to explore the utility of EYFSP as an initial screening tool for ASD in early school years

    Monte Carlo investigations of phase transitions: status and perspectives

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    Using the concept of finite-size scaling, Monte Carlo calculations of various models have become a very useful tool for the study of critical phenomena, with the system linear dimension as a variable. As an example, several recent studies of Ising models are discussed, as well as the extension to models of polymer mixtures and solutions. It is shown that using appropriate cluster algorithms, even the scaling functions describing the crossover from the Ising universality class to the mean-field behavior with increasing interaction range can be described. Additionally, the issue of finite-size scaling in Ising models above the marginal dimension (d*=4) is discussed.Comment: 23 pages, including 14 PostScript figures. Presented at StatPhys-Taiwan, August 9-16, 1999. Also available as PDF file at http://www.cond-mat.physik.uni-mainz.de/~luijten/erikpubs.htm

    Children and older adults exhibit distinct sub-optimal cost-benefit functions when preparing to move their eyes and hands

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    "© 2015 Gonzalez et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited"Numerous activities require an individual to respond quickly to the correct stimulus. The provision of advance information allows response priming but heightened responses can cause errors (responding too early or reacting to the wrong stimulus). Thus, a balance is required between the online cognitive mechanisms (inhibitory and anticipatory) used to prepare and execute a motor response at the appropriate time. We investigated the use of advance information in 71 participants across four different age groups: (i) children, (ii) young adults, (iii) middle-aged adults, and (iv) older adults. We implemented 'cued' and 'non-cued' conditions to assess age-related changes in saccadic and touch responses to targets in three movement conditions: (a) Eyes only; (b) Hands only; (c) Eyes and Hand. Children made less saccade errors compared to young adults, but they also exhibited longer response times in cued versus non-cued conditions. In contrast, older adults showed faster responses in cued conditions but exhibited more errors. The results indicate that young adults (18 -25 years) achieve an optimal balance between anticipation and execution. In contrast, children show benefits (few errors) and costs (slow responses) of good inhibition when preparing a motor response based on advance information; whilst older adults show the benefits and costs associated with a prospective response strategy (i.e., good anticipation)
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