4,372 research outputs found
Whole genome sequencing of single circulating tumor cells from neuroendocrine neoplasms
Single-cell profiling of circulating tumor cells (CTCs) as part of a minimally invasive liquid biopsy presents an opportunity to characterize and monitor tumor heterogeneity and evolution in individual patients. In this study, we aimed to compare single-cell copy number variation (CNV) data with tissue, and define the degree of intra- and inter-patient genomic heterogeneity. We performed next generation sequencing (NGS) whole genome CNV analysis of 125 single CTCs derived from seven patients with neuroendocrine neoplasms (NEN) alongside matched white blood cells (WBC), formalin fixed paraffin embedded (FFPE) and fresh frozen (FF) samples. CTC CNV profiling demonstrated recurrent chromosomal alterations in previously reported NEN copy number hotspots, including the prognostically relevant loss of chromosome 18. Unsupervised hierarchical clustering revealed CTCs with distinct clonal lineages as well as significant intra- and inter-patient genomic heterogeneity, including subclonal alterations not detectable by bulk analysis and previously unreported in NEN. Notably, we also demonstrate the presence of genomically distinct CTCs according to the enrichment strategy utilized (EpCAM-dependent versus size-based). This work has significant implications for the identification of therapeutic targets, tracking of evolutionary change and the implementation of CTC-biomarkers in cancer
Upper limit for gamma-ray emission above 140 GeV from the dwarf spheroidal galaxy Draco
The nearby dwarf spheroidal galaxy Draco with its high mass to light ratio is
one of the most auspicious targets for indirect dark matter searches.
Annihilation of hypothetical DM particles can result in high-energy gamma-rays,
e.g. from neutralino annihilation in the supersymmetric framework. With the
MAGIC telescope a search for a possible DM signal originating from Draco was
performed during 2007. The analysis of the data results in a flux upper limit
of 1.1x10^-11 photons cm^-2 sec^-1 for photon energies above 140 GeV, assuming
a point like source. Furthermore, a comparison with predictions from
supersymmetric models is given. While our results do not constrain the mSUGRA
phase parameter space, a very high flux enhancement can be ruled out.Comment: Accepted for publication by Astrophysical Journa
Observation of Pulsed Gamma-rays Above 25 GeV from the Crab Pulsar with MAGIC
One fundamental question about pulsars concerns the mechanism of their pulsed
electromagnetic emission. Measuring the high-end region of a pulsar's spectrum
would shed light on this question. By developing a new electronic trigger, we
lowered the threshold of the Major Atmospheric gamma-ray Imaging Cherenkov
(MAGIC) telescope to 25 GeV. In this configuration, we detected pulsed
gamma-rays from the Crab pulsar that were greater than 25 GeV, revealing a
relatively high cutoff energy in the phase-averaged spectrum. This indicates
that the emission occurs far out in the magnetosphere, hence excluding the
polar-cap scenario as a possible explanation of our measurement. The high
cutoff energy also challenges the slot-gap scenario.Comment: Slight modification of the analysis: Fitting a more general function
to the combined data set of COMPTEL, EGRET and MAGIC. Final result and
conclusion is unchange
First bounds on the high-energy emission from isolated Wolf-Rayet binary systems
High-energy gamma-ray emission is theoretically expected to arise in tight
binary star systems (with high mass loss and high velocity winds), although the
evidence of this relationship has proven to be elusive so far. Here we present
the first bounds on this putative emission from isolated Wolf-Rayet (WR) star
binaries, WR 147 and WR 146, obtained from observations with the MAGIC
telescope.Comment: (Authors are the MAGIC Collaboration.) Manuscript in press at The
Astrophysical Journal Letter
Probing quantum gravity using photons from a flare of the active galactic nucleus Markarian 501 observed by the MAGIC telescope
We analyze the timing of photons observed by the MAGIC telescope during a
flare of the active galactic nucleus Mkn 501 for a possible correlation with
energy, as suggested by some models of quantum gravity (QG), which predict a
vacuum refractive index \simeq 1 + (E/M_{QGn})^n, n = 1,2. Parametrizing the
delay between gamma-rays of different energies as \Delta t =\pm\tau_l E or
\Delta t =\pm\tau_q E^2, we find \tau_l=(0.030\pm0.012) s/GeV at the 2.5-sigma
level, and \tau_q=(3.71\pm2.57)x10^{-6} s/GeV^2, respectively. We use these
results to establish lower limits M_{QG1} > 0.21x10^{18} GeV and M_{QG2} >
0.26x10^{11} GeV at the 95% C.L. Monte Carlo studies confirm the MAGIC
sensitivity to propagation effects at these levels. Thermal plasma effects in
the source are negligible, but we cannot exclude the importance of some other
source effect.Comment: 12 pages, 3 figures, Phys. Lett. B, reflects published versio
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Measurement of B(B-->X_s {\gamma}), the B-->X_s {\gamma} photon energy spectrum, and the direct CP asymmetry in B-->X_{s+d} {\gamma} decays
The photon spectrum in B --> X_s {\gamma} decay, where X_s is any strange
hadronic state, is studied using a data sample of (382.8\pm 4.2) \times 10^6
e^+ e^- --> \Upsilon(4S) --> BBbar events collected by the BABAR experiment at
the PEP-II collider. The spectrum is used to measure the branching fraction B(B
--> X_s \gamma) = (3.21 \pm 0.15 \pm 0.29 \pm 0.08)\times 10^{-4} and the
first, second, and third moments = 2.267 \pm 0.019 \pm 0.032 \pm
0.003 GeV,, )^2> = 0.0484 \pm 0.0053 \pm 0.0077 \pm
0.0005 GeV^2, and )^3> = -0.0048 \pm 0.0011 \pm 0.0011
\pm 0.0004 GeV^3, for the range E_\gamma > 1.8 GeV, where E_{\gamma} is the
photon energy in the B-meson rest frame. Results are also presented for
narrower E_{\gamma} ranges. In addition, the direct CP asymmetry A_{CP}(B -->
X_{s+d} \gamma) is measured to be 0.057 \pm 0.063. The spectrum itself is also
unfolded to the B-meson rest frame; that is the frame in which theoretical
predictions for its shape are made.Comment: 37 pages, 19 postscript figures, submitted to Phys. Rev. D. No
analysis or results have changed from previous version. Some changes to
improve clarity based on interactions with Phys. Rev. D referees, including
one new Figure (Fig. 13), and some minor wording/punctuation/spelling
mistakes fixe
Cross Sections for the Reactions e+e- --> K+ K- pi+pi-, K+ K- pi0pi0, and K+ K- K+ K- Measured Using Initial-State Radiation Events
We study the processes e+e- --> K+ K- pi+pi-gamma, K+ K- pi0pi0gamma, and K+
K- K+ K-gamma, where the photon is radiated from the initial state. About
84000, 8000, and 4200 fully reconstructed events, respectively, are selected
from 454 fb-1 of BaBar data. The invariant mass of the hadronic final state
defines the \epem center-of-mass energy, so that the K+ K- pi+pi- data can be
compared with direct measurements of the e+e- --> K+ K- pi+pi- reaction. No
direct measurements exist for the e+e- --> K+ K-pi0pi0 or e+e- --> K+ K-K+ K-
reactions, and we present an update of our previous result with doubled
statistics. Studying the structure of these events, we find contributions from
a number of intermediate states, and extract their cross sections. In
particular, we perform a more detailed study of the e+e- --> phi(1020)pipigamma
reaction, and confirm the presence of the Y(2175) resonance in the phi(1020)
f0(980) and K+K-f0(980) modes. In the charmonium region, we observe the J/psi
in all three final states and in several intermediate states, as well as the
psi(2S) in some modes, and measure the corresponding product of branching
fraction and electron width.Comment: 35 pages, 42 figure
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Precise Measurement of the e+ e- --> pi+ pi- (gamma) Cross Section with the Initial-State Radiation Method at BABAR
A precise measurement of the cross section of the process
from threshold to an energy of 3GeV is obtained
with the initial-state radiation (ISR) method using 232fb of data
collected with the BaBar detector at center-of-mass energies near
10.6GeV. The ISR luminosity is determined from a study of the leptonic process
, which is found to agree with the
next-to-leading-order QED prediction to within 1.1%. The cross section for the
process is obtained with a systematic uncertainty
of 0.5% in the dominant resonance region. The leading-order hadronic
contribution to the muon magnetic anomaly calculated using the measured
cross section from threshold to 1.8GeV is .Comment: 58 pages, 56 figures, to be submitted to Phys. Rev.
Measurement of Branching Fractions and Rate Asymmetries in the Rare Decays B -> K(*) l+ l-
In a sample of 471 million BB events collected with the BABAR detector at the
PEP-II e+e- collider we study the rare decays B -> K(*) l+ l-, where l+ l- is
either e+e- or mu+mu-. We report results on partial branching fractions and
isospin asymmetries in seven bins of di-lepton mass-squared. We further present
CP and lepton-flavor asymmetries for di-lepton masses below and above the J/psi
resonance. We find no evidence for CP or lepton-flavor violation. The partial
branching fractions and isospin asymmetries are consistent with the Standard
Model predictions and with results from other experiments.Comment: 16 pages, 14 figures, accepted by Phys. Rev.
Search for lepton-number violating processes in B+ -> h- l+ l+ decays
We have searched for the lepton-number violating processes B+ -> h- l+ l+
with h- = K-/pi- and l+ = e+/mu+, using a sample of 471+/-3 million BBbar
events collected with the BaBar detector at the PEP-II e+e- collider at the
SLAC National Accelerator Laboratory. We find no evidence for these decays and
place 90% confidence level upper limits on their branching fractions Br(B+ ->
pi- e+ e+) K- e+ e+) pi-
mu+ mu+) K- mu+ mu+) < 6.7 x 10^{-8}.Comment: 8 pages, 4 postscript figures, submitted to Phys. Rev. D. R
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