Two new metal–organic framework structures derived from terephthalate and linear trimetallic zinc building units

Two new zinc-terephthalate MOFs, (H2NEt2)[Zn3(BDC)3(HCO2)]1.5DEF (1) and Zn4(BDC)3(HCO2)2(DEF)4(2), based on trinuclear zinc secondary building units have been solvothermally synthesized from the well-studied MOF-5 system Zn–H2BDC–DEF (H2BDC = 1,4-benzenedicarboxylic acid or terephthalic acid; DEF = N,N-diethylformamide). It is shown that adding small amounts of formic acid to this system has a great influence on the formation of 3D networks based upon trimetallic zinc building units Zn3(O2CR)6. The structures of 1 and 2 comprise stacked 36 tessellated 2D zinc-terephthalate layers which are linked into 3D frameworks either by bridging formate monoanions (1) or by in situ generated neutral bridging units Zn(HCO2)2(DEF)4 (2). Flowing supercritical-CO2 activation of 1 led to a partially (80%) desolvated and probably collapsed structure (1-SC) with a measured BET (Brunauer–Emmett–Teller) surface area of 38 m2 g-1

The Primate Community of Cachoeira (Brazilian Amazonia): A Model to Decipher Ecological Partitioning among Extinct Species

International audienceDental microwear analysis is conducted on a community of platyrrhine primates from South America. This analysis focuses on the primate community of Cachoeira Porteira (Para, Brazil), in which seven sympatric species occur: Alouatta seniculus, Ateles paniscus, Cebus apella, Chiropotes satanas, Pithecia Pithecia, Saguinus midas, and Saimiri sciureus. Shearing quotients are also calculated for each taxon of this primate community. Dental microwear results indicate significant differences between taxa, but are somewhat insufficient when it comes to discriminating between ecologically similar taxa. The primates of Cachoeira Porteira all incorporate a certain amount of fruit in their diet, entailing a definite amount of interspecific competition as they must share food resources. Alouatta is the most folivorous taxon of this community, which is corroborated by dental microwear analysis. Ateles, although of a similar size to Alouatta, limits inter-specific competition by incorporating more fruit in its diet. Cebus has a very diverse omnivorous diet, which is highlighted in this study, as it compares to both fruit and leaf eating taxa. In some cases, microwear results need to be supplemented by other methods. For example, dental microwear seems insufficient to distinguish between Pithecia and Chiropotes, which eat foods with similar physical properties. However, other methods (i.e. shearing quotients and body mass) provide enough complimentary information to be able to highlight differences between the two taxa. On the other hand, dental microwear can highlight differences between primates which have similar diets, such as Saimiri and Saguinus. In this case, differences could be due to other exogenous factors

Faculty Development and Quality Assurance in the EU ERAMIS Project

The aim of the ERAMIS project is to create a network of Masters degrees “Informatics as a Second Competence” in nine beneficiary universities of Kazakhstan, Kyrgyzstan and Russia. This contribution presents how faculty development is organized and quality assurance implemented inside this project.This work was supported in part by the EU Tempus Project ERAMIS 159025-TEMPUS-1-2009-FR-TEMPUS-JPCR

Using springbok (Antidorcas) dietary proxies to reconstruct inferred palaeovegetational changes over 2 million years in Southern Africa

The reconstruction of past vegetation and climatic conditions of the Cradle of Humankind, Gauteng Province, South Africa, has been approached using various proxies (such as micromammals, speleothems, faunal and floral presence and stable carbon isotopes). Elisabeth Vrba's seminal studies (1974; 1975) on the fossil record of this region indicated dramatic faunal turnover based on species extinction and speciation data. This turnover was thought to have been driven by increasing aridity and spreading grasslands. These reconstructions however, are continuously being refined and adapted in light of advancing techniques (such as dental microwear textural analysis) and terrestrial proxies, such as speleothems. However, more recent studies show varying proportions from wooded towards more grassland-dominated habitats, with the most common reconstruction being the heterogeneous ‘mosaic’ habitat. Here we re-evaluate the findings of a transition from woodland to grassland conditions in the fossil record from Member 4 Sterkfontein to Member 5 Sterkfontein and the deposits of Swartkrans. To approach the palaeovegetation changes through time via a different angle, we focus on the diet of the springbok (genus Antidorcas), represented throughout this temporal period from geological members dating from 2.8–0.8 Ma. We use detailed dietary methods (dental linear measurements, mesowear, microwear, and stable carbon isotope analysis) to explore past changes in diets of springbok that can be used to indicate the prevailing vegetation conditions. Our results presented here broadly agree with previous palaeoenvironmental reconstructions, in indicating increased grassland post ca 1.7 Ma, with some suggestion of more heterogeneous habitats for Swartkrans Member 2 (ca 1.65–1.07 Ma). We find that there is support for the implementation of a multi-disciplinary approach to produce more accurate and robust reconstructions of past diets and by extension, of palaeovegetation conditions, if the selected herbivore species is a mixed-feeder, like the springbok

Structural snapshots for mechanism-based inactivation of a glycoside hydrolase by cyclopropyl carbasugars

This work was supported by an NSERC Discovery Grant (AJB: #121348-2012), a Wellcome Trust Career Development Fellowship (TMG: grant 095828), a Wellcome Trust Institutional Strategic Support award (TMG and RJP), a MSFHR Career Investigator Award (RB), a NSERC Discovery Grant (RB), and an NSERC PGSM Scholarship (CA).Glycoside hydrolases (GHs) have attracted considerable attention as targets for therapeutic agents, and thus mechanism-based inhibitors are of great interest. We report the first structural analysis of a carbocyclic mechanism-based GH inactivator, the results of which show that the two Michaelis complexes are in 2H3 conformations. We also report the synthesis and reactivity of a fluorinated analogue and the structure of its covalently linked intermediate (flattened 2H3 half-chair). We conclude that these inactivator reactions mainly involve motion of the pseudo-anomeric carbon atom, knowledge that should stimulate the design of new transition-state analogues for use as chemical biology tools.Publisher PDFPeer reviewe

Loss of HIF-1α in the Notochord Results in Cell Death and Complete Disappearance of the Nucleus Pulposus.

The intervertebral disc (IVD) is one of the largest avascular organs in vertebrates. The nucleus pulposus (NP), a highly hydrated and proteoglycan-enriched tissue, forms the inner portion of the IVD. The NP is surrounded by a multi-lamellar fibrocartilaginous structure, the annulus fibrosus (AF). This structure is covered superior and inferior side by cartilaginous endplates (CEP). The NP is a unique tissue within the IVD as it results from the differentiation of notochordal cells, whereas, AF and CEP derive from the sclerotome. The hypoxia inducible factor-1α (HIF-1α) is expressed in NP cells but its function in NP development and homeostasis is largely unknown. We thus conditionally deleted HIF-1α in notochordal cells and investigated how loss of this transcription factor impacts NP formation and homeostasis at E15.5, birth, 1 and 4 months of age, respectively. Histological analysis, cell lineage studies, and TUNEL assay were performed. Morphologic changes of the mutant NP cells were identified as early as E15.5, followed, postnatally, by the progressive disappearance and replacement of the NP with a novel tissue that resembles fibrocartilage. Notably, lineage studies and TUNEL assay unequivocally proved that NP cells did not transdifferentiate into chondrocyte-like cells but they rather underwent massive cell death, and were completely replaced by a cell population belonging to a lineage distinct from the notochordal one. Finally, to evaluate the functional consequences of HIF-1α deletion in the NP, biomechanical testing of mutant IVD was performed. Loss of the NP in mutant mice significantly reduced the IVD biomechanical properties by decreasing its ability to absorb mechanical stress. These findings are similar to the changes usually observed during human IVD degeneration. Our study thus demonstrates that HIF-1α is essential for NP development and homeostasis, and it raises the intriguing possibility that this transcription factor could be involved in IVD degeneration in humans