Improvement of the size estimation of 3D tracked droplets using digital in-line holography with joint estimation reconstruction

International audienceDigital holography is a valuable tool for three-dimensional information extraction. Among existing configurations, the originally proposed setup (i.e. Gabor, or in-line holography), is reasonably immune to variations in the experimental environment making it a method of choice for studies of fluid dynamics. Nevertheless, standard hologram reconstruction techniques, based on numerical light back-propagation are prone to artifacts such as twin images or aliases that limit both the quality and quantity of information extracted from the acquired holograms. To get round this issue, the hologram reconstruction as a parametric inverse problem has been shown to accurately estimate 3D positions and the size of seeding particles directly from the hologram. To push the bounds of accuracy on size estimation still further, we propose to fully exploit the information redundancy of a hologram video sequence using joint estimation reconstruction. Applying this approach in a bench-top experiment, we show that it led to a relative accuracy of 0.13 % (for a 30 µm diameter droplet) for droplet size estimation, and a tracking accuracy of σ x × σ y × σ z = 0.15 × 0.15 × 1 pixels

Towards an experimental von Karman dynamo: numerical studies for an optimized design

Numerical studies of a kinematic dynamo based on von Karman type flows between two counterrotating disks in a finite cylinder are reported. The flow has been optimized using a water model experiment, varying the driving impellers configuration. A solution leading to dynamo action for the mean flow has been found. This solution may be achieved in VKS2, the new sodium experiment to be performed in Cadarache, France. The optimization process is described and discussed, then the effects of adding a stationary conducting layer around the flow on the threshold, on the shape of the neutral mode and on the magnetic energy balance are studied. Finally, the possible processes involved into kinematic dynamo action in a von Karman flow are reviewed and discussed. Among the possible processes we highlight the joint effect of the boundary-layer radial velocity shear and of the Ohmic dissipation localized at the flow/outer-shell boundary

Statistical properties of driven Magnetohydrodynamic turbulence in three dimensions: Novel universality

We analyse the universal properties of nonequilibrium steady states of driven Magnetohydrodynamic (MHD) turbulence in three dimensions (3d). We elucidate the dependence of various phenomenologically important dimensionless constants on the symmetries of the two-point correlation functions. We, for the first time, also suggest the intriguing possibility of multiscaling universality class varying continuously with certain dimensionless parameters. The experimental and theoretical implications of our results are discussed.Comment: To appear in Europhys. Lett. (2004

Systematics of the magnetic-Prandtl-number dependence of homogeneous, isotropic magnetohydrodynamic turbulence

We present the results of our detailed pseudospectral direct numerical simulation (DNS) studies, with up to $1024^3$ collocation points, of incompressible, magnetohydrodynamic (MHD) turbulence in three dimensions, without a mean magnetic field. Our study concentrates on the dependence of various statistical properties of both decaying and statistically steady MHD turbulence on the magnetic Prandtl number ${\rm Pr_M}$ over a large range, namely, $0.01 \leq {\rm Pr_M} \leq 10$. We obtain data for a wide variety of statistical measures such as probability distribution functions (PDFs) of moduli of the vorticity and current density, the energy dissipation rates, and velocity and magnetic-field increments, energy and other spectra, velocity and magnetic-field structure functions, which we use to characterise intermittency, isosurfaces of quantities such as the moduli of the vorticity and current, and joint PDFs such as those of fluid and magnetic dissipation rates. Our systematic study uncovers interesting results that have not been noted hitherto. In particular, we find a crossover from larger intermittency in the magnetic field than in the velocity field, at large ${\rm Pr_M}$, to smaller intermittency in the magnetic field than in the velocity field, at low ${\rm Pr_M}$. Furthermore, a comparison of our results for decaying MHD turbulence and its forced, statistically steady analogue suggests that we have strong universality in the sense that, for a fixed value of ${\rm Pr_M}$, multiscaling exponent ratios agree, at least within our errorbars, for both decaying and statistically steady homogeneous, isotropic MHD turbulence.Comment: 49 pages,33 figure

Generation of magnetic field by dynamo action in a turbulent flow of liquid sodium

We report the observation of dynamo action in the VKS experiment, i.e., the generation of magnetic field by a strongly turbulent swirling flow of liquid sodium. Both mean and fluctuating parts of the field are studied. The dynamo threshold corresponds to a magnetic Reynolds number Rm \sim 30. A mean magnetic field of order 40 G is observed 30% above threshold at the flow lateral boundary. The rms fluctuations are larger than the corresponding mean value for two of the components. The scaling of the mean square magnetic field is compared to a prediction previously made for high Reynolds number flows.Comment: 4 pages, 5 figure

MHD in von Kármán swirling flows, development and first run of the sodium experiment

URL: http://www-spht.cea.fr/articles/s01/004 MHD dans les écoulements de von Kármán | Collaboration VKSNATO Science Series II 26, 35-50 (2001). NATO Advanced Research Workshop, Dynamo and Dynamics, A Mathematical ChallengeWe describe the motivations, development and first run of the Von Kármán Sodium (VKS) experiment built to study high Reynolds number magnetohydrodynamics and applications to the dynamo effect. The flow is optimized using water experiments at scale 1/2 and kinematic dynamo simulations. In VKS run1, induction measurements are made in the presence of an externally applied field. Results are reported concerning the geometry of the induced field and its fluctuations in time

“Interactive Technology Assessment” and Beyond: the Field Trial of Genetically Modified Grapevines at INRA-Colmar

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Hydraulics of aerated flows: qui pro quo?

In turbulent free-surface flows, the deformation of the surface leads to air bubble entrainment and droplet projections when the turbulent shear stress is greater than the surface tension stress that resists to the interfacial breakup. These complex processes at the water-air interface have been the focus of extensive experimental, numerical and theoretical studies over last two decades and this paper reviews the key advancements. It is highlighted that the recent progress in metrology enables the detailed measurements of a range of air-water flow properties under controlled flow conditions, representing the sine qua non requirement for the development of improved physical understanding and for validating phenomenological and numerical models. The author believes that the future research into aerated flow hydraulics should focus on field measurements of high quality, development of new measurement approaches and data analyses tools, computational fluid dynamics modelling of aerated flows, and the mechanics of aerated flows in conduits

Accelerating root system phenotyping of seedlings through a computer-assisted processing pipeline

Background: There are numerous systems and techniques to measure the growth of plant roots. However, phenotyping large numbers of plant roots for breeding and genetic analyses remains challenging. One major difficulty is to achieve high throughput and resolution at a reasonable cost per plant sample. Here we describe a cost-effective root phenotyping pipeline, on which we perform time and accuracy benchmarking to identify bottlenecks in such pipelines and strategies for their acceleration. Results: Our root phenotyping pipeline was assembled with custom software and low cost material and equipment. Results show that sample preparation and handling of samples during screening are the most time consuming task in root phenotyping. Algorithms can be used to speed up the extraction of root traits from image data, but when applied to large numbers of images, there is a trade-off between time of processing the data and errors contained in the database. Conclusions: Scaling-up root phenotyping to large numbers of genotypes will require not only automation of sample preparation and sample handling, but also efficient algorithms for error detection for more reliable replacement of manual interventions

Comparing the transcriptomes of embryos from domesticated and wild Atlantic salmon (Salmo salar L.) stocks and examining factors that influence heritability of gene expression

Background  Due to selective breeding, domesticated and wild Atlantic salmon are genetically diverged, which raises concerns about farmed escapees having the potential to alter the genetic composition of wild populations and thereby disrupting local adaptation. Documenting transcriptional differences between wild and domesticated stocks under controlled conditions is one way to explore the consequences of domestication and selection. We compared the transcriptomes of wild and domesticated Atlantic salmon embryos, by using a custom 44k oligonucleotide microarray to identify perturbed gene pathways between the two stocks, and to document the inheritance patterns of differentially-expressed genes by examining gene expression in their reciprocal hybrids.  Results  Data from 24 array interrogations were analysed: four reciprocal cross types (W♀×W♂, D♀×W♂; W♀×D♂, D♀×D♂)×six biological replicates. A common set of 31,491 features on the microarrays passed quality control, of which about 62% were assigned a KEGG Orthology number. A total of 6037 distinct genes were identified for gene-set enrichment/pathway analysis. The most highly enriched functional groups that were perturbed between the two stocks were cellular signalling and immune system, ribosome and RNA transport, and focal adhesion and gap junction pathways, relating to cell communication and cell adhesion molecules. Most transcripts that were differentially expressed between the stocks were governed by additive gene interaction (33 to 42%). Maternal dominance and over-dominance were also prevalent modes of inheritance, with no convincing evidence for a stock effect.  Conclusions  Our data indicate that even at this relatively early developmental stage, transcriptional differences exist between the two stocks and affect pathways that are relevant to wild versus domesticated environments. Many of the identified differentially perturbed pathways are involved in organogenesis, which is expected to be an active process at the eyed egg stage. The dominant effects are more largely due to the maternal line than to the origin of the stock. This finding is particularly relevant in the context of potential introgression between farmed and wild fish, since female escapees tend to have a higher spawning success rate compared to males