Benefit versus cost trade-offs of masting across seed-to-seedling transition for a dominant subtropical forest species

Masting is a common reproductive strategy regulating seedling regeneration in many perennial plant species. The evolutionary origins and functional benefits of masting have been explained by well-supported hypotheses relating to economies of scale of seed production. Nevertheless, our understanding of the potential costs of masting for the plant seed-to-seedling transitions remains limited. We tracked the seed fate and documented changes in the seed spatial distribution patterns during the seed-to-seedling transition process of Castanopsis fargesii, a dominant species of subtropical evergreen broad-leaved forests in China under natural conditions for more than 6 years. Masting resulted in a high proportion of seeds escaping predation by vertebrates and rodents, supporting the predator satiation hypothesis. However, it increased the pre-dispersal seed predation by insects, and decreased the seed germination rate due to a negative effect on seed mass. This resulted in seed-to-seedling transition rates during mast years to be roughly half as much as during non-mast years. In addition, masting negatively affected the spatial rearrangement of seeds, resulting in a spatial aggregative distribution pattern of newly germinated seedlings. The combined negative effects of smaller seeds and spatially aggregated seedlings reduced the survival rate of newly germinated seedlings at seedling establishment stage. Synthesis. Considering the whole seed-to-established seedling transition process, the benefits of masting on seedling recruitment due to the effective seed predator situation by vertebrates and rodents were decreased by the additional costs on seed mass, seed germination, seed spatial arrangement and seedling establishment. Our results highlight the importance of considering both the positive and negative effects of masting at each stage of the seed-to-seedling transition. Inferences based on seed predation and recruitment of newly germinated seedlings alone would lead to an overly optimistic conclusion about the benefits of masting. © 2021 British Ecological Societ

allodb: An R package for biomass estimation at globally distributed extratropical forest plots

Allometric equations for calculation of tree above-ground biomass (AGB) form the basis for estimates of forest carbon storage and exchange with the atmosphere. While standard models exist to calculate forest biomass across the tropics, we lack a standardized tool for computing AGB across boreal and temperate regions that comprise the global extratropics. Here we present an integrated R package, allodb, containing systematically selected published allometric equations and proposed functions to compute AGB. The data component of the package is based on 701 woody species identified at 24 large Forest Global Earth Observatory (ForestGEO) forest dynamics plots representing a wide diversity of extratropical forests. A total of 570 parsed allometric equations to estimate individual tree biomass were retrieved, checked and combined using a weighting function designed to ensure optimal equation selection over the full tree size range with smooth transitions across equations. The equation dataset can be customized with built-in functions that subset the original dataset and add new equations. Although equations were curated based on a limited set of forest communities and number of species, this resource is appropriate for large portions of the global extratropics and can easily be expanded to cover novel forest types

Globally invariant metabolism but density-diversity mismatch in springtails.

Soil life supports the functioning and biodiversity of terrestrial ecosystems. Springtails (Collembola) are among the most abundant soil arthropods regulating soil fertility and flow of energy through above- and belowground food webs. However, the global distribution of springtail diversity and density, and how these relate to energy fluxes remains unknown. Here, using a global dataset representing 2470 sites, we estimate the total soil springtail biomass at 27.5 megatons carbon, which is threefold higher than wild terrestrial vertebrates, and record peak densities up to 2 million individuals per square meter in the tundra. Despite a 20-fold biomass difference between the tundra and the tropics, springtail energy use (community metabolism) remains similar across the latitudinal gradient, owing to the changes in temperature with latitude. Neither springtail density nor community metabolism is predicted by local species richness, which is high in the tropics, but comparably high in some temperate forests and even tundra. Changes in springtail activity may emerge from latitudinal gradients in temperature, predation and resource limitation in soil communities. Contrasting relationships of biomass, diversity and activity of springtail communities with temperature suggest that climate warming will alter fundamental soil biodiversity metrics in different directions, potentially restructuring terrestrial food webs and affecting soil functioning

Global fine-resolution data on springtail abundance and community structure

Springtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data.</p

Global fine-resolution data on springtail abundance and community structure

CODE AVAILABILITY : Programming R code is openly available together with the database from Figshare.SUPPLEMENTARY MATERIAL 1 : Template for data collectionSUPPLEMENTARY MATERIAL 2 : Data Descriptor WorksheetSpringtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data.Open Access funding enabled and organized by Projekt DEAL.http://www.nature.com/sdatahj2024Plant Production and Soil ScienceSDG-15:Life on lan

Spatial variation in community structure of a subtropical evergreen broad-leaved forest: Implications for sampling design

With the full survey data for a 24-ha subtropical evergreen broad-leaved forest dynamics plot, we evaluated spatial variation in forest structure characteristics (basal area and aboveground biomass), and calculated the minimal sample size and total sampling area necessary to estimate the forest structure characteristics within 20% (+/- 10%) of the observed values with 95% probability for particular quadrat sizes by using a computer program that is designed to simulate the sampling process by allowing different sized quadrats to be randomly located within the sampling region. We found that (1) based on the 600 20 mx20 m subplots, basal area and aboveground biomass displayed a high degree of variation, with respective coefficients of variation of 27% and 31%; (2) based on the computer simulation analysis, the variability of basal area and aboveground biomass decreased with increasing quadrat size. The number of quadrats required to achieve the specified degree of precision dropped sharply with the increase of quadrat size. However, the total sampling area increased with increasing quadrat size, suggesting that using several small quadrats across the sampling area is more efficient than using fewer larger quadrats. Results of this study are valuable for evaluating the reliability of previous research and may assist researchers in designing effective sampling strategies for future field surveys, particularly in subtropical evergreen broad-leaved forests in China

The Allometry of Coarse Root Biomass: Log-Transformed Linear Regression or Nonlinear Regression?

<div><p>Precise estimation of root biomass is important for understanding carbon stocks and dynamics in forests. Traditionally, biomass estimates are based on allometric scaling relationships between stem diameter and coarse root biomass calculated using linear regression (LR) on log-transformed data. Recently, it has been suggested that nonlinear regression (NLR) is a preferable fitting method for scaling relationships. But while this claim has been contested on both theoretical and empirical grounds, and statistical methods have been developed to aid in choosing between the two methods in particular cases, few studies have examined the ramifications of erroneously applying NLR. Here, we use direct measurements of 159 trees belonging to three locally dominant species in east China to compare the LR and NLR models of diameter-root biomass allometry. We then contrast model predictions by estimating stand coarse root biomass based on census data from the nearby 24-ha Gutianshan forest plot and by testing the ability of the models to predict known root biomass values measured on multiple tropical species at the Pasoh Forest Reserve in Malaysia. Based on likelihood estimates for model error distributions, as well as the accuracy of extrapolative predictions, we find that LR on log-transformed data is superior to NLR for fitting diameter-root biomass scaling models. More importantly, inappropriately using NLR leads to grossly inaccurate stand biomass estimates, especially for stands dominated by smaller trees.</p></div