The communities of ectomycorrhizal fungal species associated with Betula pendula ROTH and Pinus sylvestris L. growing in heavy-metal contaminated soils

Aims Pioneer tree species such as Betula pendula and Pinus sylvestris encroach soils contaminated with heavy metals (HMs). This is facilitated by ectomycorrhizal fungi colonizing tree roots. Thus, we evaluated the ectomycorrhizal fungal (EMF) communities of B. pendula and P. sylvestris growing in HMcontaminated soils compared to non-contaminated soils. We also studied the effect of HMs and soil properties on EMF communities and soil fungal biomass. Methods Roots of B. pendula and P. sylvestris were collected from three HM-contaminated sites and from two non-contaminated sites located in Poland. EMF species were identified using DNA barcoding. Soil fungal biomass was determined by soil ergosterol. Results B. pendula and P. sylvestris growing in HMcontaminated soils had similar EMF communities, where Scleroderma, Rhizopogon and Russula as well as ectomycorrhizae of the long-distance exploration type dominated. Among all of the examined soil factors studied, toxicity index (TITotal) was the most significant factor shaping the composition of EMF communities. Despite significant differences in the structure of the EMF communities of trees growing in HMcontaminated sites compared to control sites, no differences in overall diversity were observed. Conclusions Only well-adapted EMF species can survive toxic conditions and form ectomycorrhizal symbiosis with encroaching trees facilitating the forest succession on contaminated soils

Ectomycorrhizal fungal communities of native and non-native Pinus and Quercus species in a common garden of 35-year-old trees

Non-native tree species have been widely planted or have become naturalized in most forested landscapes. It is not clear if native trees species collectively differ in ectomycorrhizal fungal (EMF) diversity and communities from that of non-native tree species. Alternatively, EMF species community similarity may be more determined by host plant phylogeny than by whether the plant is native or non-native. We examined these unknowns by comparing two genera, native and non-native Quercus robur and Quercus rubra and native and non-native Pinus sylvestris and Pinus nigra in a 35-year-old common garden in Poland. Using molecular and morphological approaches, we identified EMF species from ectomycorrhizal root tips and sporocarps collected in the monoculture tree plots. A total of 69 EMF species were found, with 38 species collected only as sporocarps, 18 only as ectomycorrhizas, and 13 both as ectomycorrhizas and sporocarps. The EMF species observed were all native and commonly associated with a Holarctic range in distribution. We found that native Q. robur had ca. 120% higher total EMF species richness than the non-native Q. rubra, while native P. sylvestris had ca. 25% lower total EMF species richness than non-native P. nigra. Thus, across genera, there was no evidence that native species have higher EMF species diversity than exotic species. In addition, we found a higher similarity in EMF communities between the two Pinus species than between the two Quercus species. These results support the naturalization of non-native trees by means of mutualistic associations with cosmopolitan and novel fungi

Data from: Linking the respiration of fungal sporocarps with their nitrogen concentration: variation among species, tissues, and guilds

Tissue nitrogen (N) concentration has been correlated with respiration (RS) across plants of different life forms, functional and phylogenetic groups, plant organs and ectomycorrhizae of different fungal species. Nothing is known, however, if a similar relationship exists in other organisms like fungi. Here, we explored the N-RS relationship across sporocarps of 93 fungal species that varied in their guilds (mutualistic, saprotrophic, and parasitic) as well as “tissue” types (caps and stipes). We hypothesized that RS, N and protein concentrations were higher for saprotrophic fungi than either mutualistic and parasitic fungi and were higher for caps than for stipes. We also hypothesized that respiration of fungal guild could be predicted by the N concentration. Lastly we predicted N and RS were phylogenetically conserved and that by subtracting metabolically inactive N in chitin, we could improve the N-RS relationship. Sporocarp N concentration only explained 26% of the variation in RS across species. We found a significant difference in the N-RS relationship among the three fungal guilds, but no difference between the two tissue types. Saprotrophic species had higher N concentration and respiration than mutualistic and parasitic fungal species. Sporocarp components differed with caps showing both higher respiration and higher N and protein concentrations than stipes. Overall, our results show that fungal sporocarp nitrogen concentration is phylogenetically conserved among fungal families and may prove to be a strong predictor of fungal guild. The positive N-RS relationships existed for all fungal species (similar to plants), within fungal guilds (similar to plant functional groups), and fungal “tissue” types (like plants’ organs). The clear linkage of fungal sporocarp respiration to total N concentration could help improve C and N cycling models in forest ecosystems by including estimates of fungal respiration based on fungal N concentration

Ectomycorrhizal identity determines respiration and concentrations of nitrogen and non-structural carbohydrates in root tips : a test using Pinus sylvestris and Quercus robur saplings

Fine roots play a significant role in plant and ecosystem respiration (RS); therefore, understanding factors controlling that process is important both to advancing understanding and potentially in modelling carbon (C) budgets. However, very little is known about the extent to which ectomycorrhizal (ECM) identity may influence RS or the underlying chemistry that may determine those rates. In order to test these relationships, we examined RS, measured as O2 consumption, of first-order ECM root tips of Pinus sylvestris L. and Quercus robur L. saplings in relation to their ECM fungal symbionts and associated nitrogen (N), C and non-structural carbohydrate concentrations. Roots of P. sylvestris were colonized by Rhizopogon roseolus, Tuber sp. 1 and an unknown species of Pezizales. Fungal species colonizing Q. robur roots were Hebeloma sp., Tuber sp. 2 and one unidentified ECM fungus described as Tuber-like based on ECM morphology. ECM RS rates for different host species were significantly different and more than 97% of the variation in RS within a host species was explained by ECM root tip N concentrations. This may indicate that some of the variability in fine root RS–N relationships observed between and within different host species or their functional groups may be related to intraspecific host species differences in root tip N concentration among ECM fungal associates

Data from: Beech roots are simultaneously colonized by multiple genets of the ectomycorrhizal fungus Laccaria amethystina clustered in two genetic groups

In this study we characterize and compare the genetic structure of aboveground and belowground populations of the ectomycorrhizal fungus Laccaria amethystina in an unmanaged mixed beech forest. Fruiting bodies and mycorrhizas of L. amethystina were mapped and collected in four plots in the Świętokrzyskie Mountains (Poland). A total of 563 fruiting bodies and 394 mycorrhizas were successfully genotyped using the rDNA IGS1 (intergenic spacer) and seven SSR (simple sequence repeat) markers. We identified two different genetic clusters of L. amethystina in all of the plots, suggesting that a process of sympatric isolation may be occurring at a local scale. The proportion of individuals belonging to each cluster was similar among plots aboveground while it significantly differed belowground. Predominance of a given cluster could be explained by distinct host preferences or by priority effects and competition among genets. Both aboveground and belowground populations consisted of many intermingling small genets. Consequently, host trees were simultaneously colonized by many L. amethystina genets that may show different ecophysiological abilities. Our data showed that several genets may last for at least one year belowground and sustain into the next season. Ectomycorrhizal species reproducing by means of spores can form highly diverse and persistent belowground genets that may provide the host tree with higher resilience in a changing environment and enhance ecosystem performance

Beech roots are simultaneously colonized by multiple genets of the ectomycorrhizal fungus Laccaria amethystina clustered in two genetic groups

In this study, we characterize and compare the genetic structure of aboveground and belowground populations of the ectomycorrhizal fungus Laccaria amethystina in an unmanaged mixed beech forest. Fruiting bodies and mycorrhizas of L. amethystina were mapped and collected in four plots in the Świȩtokrzyskie Mountains (Poland). A total of 563 fruiting bodies and 394 mycorrhizas were successfully genotyped using the rDNA IGS1 (intergenic spacer) and seven simple sequence repeat markers. We identified two different genetic clusters of L. amethystina in all of the plots, suggesting that a process of sympatric isolation may be occurring at a local scale. The proportion of individuals belonging to each cluster was similar among plots aboveground while it significantly differed belowground. Predominance of a given cluster could be explained by distinct host preferences or by priority effects and competition among genets. Both aboveground and belowground populations consisted of many intermingling small genets. Consequently, host trees were simultaneously colonized by many L. amethystina genets that may show different ecophysiological abilities. Our data showed that several genets may last for at least 1 year belowground and sustain into the next season. Ectomycorrhizal species reproducing by means of spores can form highly diverse and persistent belowground genets that may provide the host tree with higher resilience in a changing environment and enhance ecosystem performance

Light, earthworms, and soil resources as predictors of diversity of 10 soil invertebrate groups across monocultures of 14 tree species

Management of biodiversity and ecosystem services requires a better understanding of the factors that influence soil biodiversity. We characterized the species (or genera) richness of 10 taxonomic groups of invertebrate soil animals in replicated monocultures of 14 temperate tree species. The focal invertebrate groups ranged from microfauna to macrofauna: Lumbricidae, Nematoda, Oribatida, Gamasida, Opilionida, Araneida, Collembola, Formicidae, Carabidae, and Staphylinidae. Measurement of invertebrate richness and ancillary variables occurred ~34 years after the monocultures were planted. The richness within each taxonomic group was largely independent of richness of other groups; therefore a broad understanding of soil invertebrate diversity requires analyses that are integrated across many taxa. Using a regression-based approach and ~125 factors related to the abundance and diversity of resources, we identified a subset of predictors that were correlated with the richness of each invertebrate group and richness integrated across 9 of the groups (excluding earthworms). At least 50% of the variability in integrated richness and richness of each invertebrate group was explained by six or fewer predictors. The key predictors of soil invertebrate richness were light availability in the understory, the abundance of an epigeic earthworm species, the amount of phosphorus, nitrogen, and calcium in soil, soil acidity, and the diversity or mass of fungi, plant litter, and roots. The results are consistent with the hypothesis that resource abundance and diversity strongly regulate soil biodiversity, with increases in resources (up to a point) likely to increase the total diversity of soil invertebrates. However, the relationships between various resources and soil invertebrate diversity were taxon-specific. Similarly, diversity of all 10 invertebrate taxa was not high beneath any of the 14 tree species. Thus, changes to tree species composition and resource availability in temperate forests will likely increase the richness of some soil invertebrates while decreasing the richness of others