CARPANTA eats words you don't need from e-mail

[spa] Presentamos CARPANTA, un sistema de resumen automático de correo electrónico que aplica técnicas de conocimiento intensivo para obtener resúmenes coherentes. El uso de herramientas de PLN de amplia cobertura garantiza la robusteza y portabilidad del sistema, pero también se explota conocimiento dependiente de lengua y dominio. CARPANTA ha sido evaluado por comparación con un corpus de resúmenes confeccionados por jueces humanos, con resultados satisfactorios. [eng] We present CARPANTA, an e-mail summarization system that applies a knowledge intensive approach to obtain highly coherent summaries. Robustness and portability are guaranteed by the use of general-purpose NLP, but it also exploits language- and domain-dependent knowledge. The system is evaluated against a corpus of human-judged summaries, reaching, satisfactory levels of performance

CARPANTA eats words you don't need from e-mail

Presentamos CARPANTA, un sistema de resumen automático de correo electrónico que aplica técnicas de conocimiento intensivo para obtener resúmenes coherentes. El uso de herramientas de PLN de amplia cobertura garantiza la robusteza y portabilidad del sistema, pero también se explota conocimiento dependiente de lengua y dominio. CARPANTA ha sido evaluado por comparación con un corpus de resúmenes confeccionados por jueces humanos, con resultados satisfactorios.We present CARPANTA, an e-mail summarization system that applies a knowledge intensive approach to obtain highly coherent summaries. Robustness and portability are guaranteed by the use of general-purpose NLP, but it also exploits language- and domain-dependent knowledge. The system is evaluated against a corpus of human-judged summaries, reaching, satisfactory levels of performance.This research has been conducted thanks to a grant associated to the X-TRACT project, PB98-1226 of the Spanish Research Department. It has also been partially funded by projects HERMES (TIC2000-0335-C03-02), PETRA (TIC2000-1735-C02-02) and by CLiC (Centre de Llenguatge i Computació)

KNOW: Developing Large-scale multilingual technologies for language understanding

The KNOW project aims to add meaning, knowledge and reasoning to current Natural Language Processing technologies

KNOW: Developing large-scale multilingual technologies for language understanding

El proyecto KNOW pretende añadir significado, conocimiento y razonamiento a las tecnologías actuales de Procesamiento del Lenguaje Natural.Postprint (published version

The role of salinity on the changes of the biomass characteristics and on the performance of an OMBR treating tannery wastewater

[EN] Tannery wastewaters are difficult to treat biologically due to the high salinity and organic matter concentration. Conventional treatments, like sequential batch reactors (SBR) and membrane bioreactors (MBR), have showed settling problems, in the case of SBR, and ultrafiltration (UF) membrane fouling in the case of MBR, slowing their industrial application. In this work, the treatment of tannery wastewater with an osmotic membrane bioreactor (OMBR) is assessed. Forward osmosis (FO) membranes are characterized by a much lower fouling degree than UF membranes. The permeate passes through the membrane pores (practically only water by the high membrane rejection) from the feed solution to the draw solution, which is also an industrial wastewater (ammonia absorption effluent) in this work. Experiments were carried out at laboratory scale with a FO CTA-NW membrane from Hydration Technology Innovations (HTI). Tannery wastewater was treated by means of an OMBR using as DS an actual industrial wastewater mainly consisting of ammonium sulphate. The monitoring of the biological process was carried out with biological indicators like microbial hydrolytic enzymatic activities, dissolved and total adenosine triphosphate (ATP) in the mixed liquor and microbial population. Results indicated a limiting conductivity in the reactor of 35 mS cm(-1) (on the 43th operation day), from which process was deteriorated. This process performance diminution was associated by a high decrease of the dehydrogenase activity and a sudden increase of the protease and lipase activities. The increase of the bacterial stress index also described appropriately the process performance. Regarding the relative abundance of bacterial phylotypes, 37 phyla were identified in the biomass. Proteobacteria were the most abundant (varying the relative abundance between 50.29% and 34.78%) during the first 34 days of operation. From this day on, Bacteroidetes were detected in a greater extent varying the relative abundance of this phylum between 27.20% and 40.45%. (C) 2018 Elsevier Ltd. All rights reserved.This study was supported by the Spanish Ministry of Economy and Competitiveness through the project RTC-2015-3582-5-AR.Lujan Facundo, MJ.; Fernández-Navarro, J.; Alonso Molina, JL.; Amoros, I.; Moreno Trigos, MY.; Mendoza Roca, JA.; Pastor Alcañiz, L. (2018). The role of salinity on the changes of the biomass characteristics and on the performance of an OMBR treating tannery wastewater. Water Research. 142:129-137. https://doi.org/10.1016/j.watres.2018.05.046S12913714

The Clinical Impact of Neoadjuvant Endocrine Treatment on Luminal-like Breast Cancers and Its Prognostic Significance: Results from a Single-Institution Prospective Cohort Study

Purpose: Neoadjuvant endocrine treatment (NET) has become a useful tool for the down-staging of luminal-like breast cancers in postmenopausal patients. It enables us to increase breast-conserving surgery (BCS) rates, provides an opportunity for us to assess in vivo NET effectiveness, and allows us to study any biological changes that may act as valid biomarkers. The purpose of this study was to evaluate the safety and effectiveness of NET, and to assess the role of Ki67 proliferation rate changes as an indicator of endocrine responsiveness. Methods: From 2016 to 2020, a single-institution cohort of patients, treated with NET and further surgery, was evaluated. In patients with Ki67 ≥ 10%, a second core biopsy was performed after four weeks. Information regarding histopathological and clinical changes was gathered. Results: A total of 115 estrogen receptor-positive (ER+)/HER2-negative patients were included. The median treatment duration was 5.0 months (IQR: 2.0–6.0). The median maximum size in the surgical sample was 40% smaller than the pretreatment size measured by ultrasound (p < 0.0001). The median pretreatment Ki67 expression was 20.0% (IQR: 12.0–30.0), and was reduced to 5.0% (IQR: 1.8–10.0) after four weeks, and to 2.0% (IQR: 1.0–8.0) in the surgical sample (p < 0.0001). BCS was performed on 98 patients (85.2%). No pathological complete responses were recorded. A larger Ki67 fold change after four weeks was significantly related to a PEPI score of zero (p < 0.002). No differences were observed between luminal A-and B-like tumors, with regard to fold change and PEPI score. Conclusions: In our cohort, NET was proven to be effective for tumor size and Ki67 downstaging. This resulted in a higher rate of conservative surgery, aided in therapeutic decision making, provided prognostic information, and constituted a safe and well-tolerated approachThis research received no external fundin

Biological treatment performance of hypersaline wastewaters with high phenols concentration from table olive packaging industry using sequencing batch reactors

Biological treatment of hypersaline wastewaters such as fermentation brine from table olive processing (FTOP), was carried out using four sequential biological reactors (SBRs). These wastewaters were characterized by conductivities higher than 90 mS·cm-1 together with COD and total phenols concentration values of more than 15 g·L-1 and 1000 mg·L-1, respectively. In order to increase the organic removal efficiency and to reduce the hydraulic retention time (HRT), extra nutrients were added and pre-treatment by adsorption was performed. Results showed that the COD/N/P relationship, in the FTOP, of 250/5/1 was appropriate for the biological process reaching COD removal efficiencies of around 80%. The FTOP adsorption pre-treatment with powder activated carbon for the reduction of phenols concentration to 400 mg·L-1 led to a HRT reduction from 40 to 15 days, maintaining the COD and total phenols removal percentages around 78% and 97%, respectively. On the other hand, &#947;-Proteobacteria was the main bacterial class, representing around 74% of the microbial community in the reactors.The authors of this work thank the financial support of CDTI (Centre for Industrial Technological Development) depending on the Spanish Ministry of Science and Innovation. Authors also thank Chiemivall for providing the activated carbons.Ferrer-Polonio, E.; Mendoza Roca, JA.; Iborra Clar, A.; Alonso Molina, JL.; Pastor Alcañiz, L. (2016). Biological treatment performance of hypersaline wastewaters with high phenols concentration from table olive packaging industry using sequencing batch reactors. Journal of Industrial and Engineering Chemistry. 43:44-52. doi:10.1016/j.jiec.2016.07.046S44524

Peripheral T-cell lymphoma: Molecular profiling recognizes subclasses and identifies prognostic markers

Peripheral T-cell lymphoma (PTCL) is a clinically aggressive disease, with a poor response to therapy and a low overall survival rate of approximately 30% after 5 years. We have analyzed a series of 105 cases with a diagnosis of PTCL using a customized NanoString platform (NanoString Technologies, Seattle, WA) that includes 208 genes associated with T-cell differentiation, oncogenes and tumor suppressor genes, deregulated pathways, and stromal cell subpopulations. A comparative analysis of the various histological types of PTCL (angioimmunoblastic T-cell lymphoma [AITL]; PTCL with T follicular helper [TFH] phenotype; PTCL not otherwise specified [NOS]) showed that specific sets of genes were associated with each of the diagnoses. These included TFH markers, cytotoxic markers, and genes whose expression was a surrogate for specific cellular subpopulations, including follicular dendritic cells, mast cells, and genes belonging to precise survival (NF-κB) and other pathways. Furthermore, the mutational profile was analyzed using a custom panel that targeted 62 genes in 76 cases distributed in AITL, PTCL-TFH, and PTCL-NOS. The main differences among the 3 nodal PTCL classes involved the RHOAG17V mutations (P < .0001), which were approximately twice as frequent in AITL (34.09%) as in PTCL-TFH (16.66%) cases but were not detected in PTCL-NOS. A multivariate analysis identified gene sets that allowed the series of cases to be stratified into different risk groups. This study supports and validates the current division of PTCL into these 3 categories, identifies sets of markers that can be used for a more precise diagnosis, and recognizes the expression of B-cell genes as an IPI-independent prognostic factor for AITL

Validation of an Online Version of the Alcohol Use Disorders Identification Test (AUDIT) for Alcohol Screening in Spanish University Students

Online alcohol screening may be helpful in preventing alcohol use disorders. We assessed psychometric properties of an online version of the Alcohol Use Disorders Identification Test (AUDIT) among Spanish university students. We used a longitudinal online survey (the UNIVERSAL project) of first-year students (18-24 years old) in five universities, including the AUDIT, as part of the WHO World Mental Health International College Student (WMH-ICS) initiative. A reappraisal interview was carried out with the Timeline Followback (TLFB) for alcohol consumption categories and the Mini International Neuropsychiatric Interview (MINI) for alcohol use disorder. Reliability, construct validity and diagnostic accuracy were assessed. Results: 287 students (75% women) completed the MINI, of whom 242 also completed the TLFB. AUDIT's Cronbach's alpha was 0.82. The confirmatory factor analysis for the one-factor solution of the AUDIT showed a good fit to the data. Significant AUDIT score differences were observed by TLFB categories and by MINI disorders. Areas under the curve (AUC) were very large for dependence (AUC = 0.96) and adequate for consumption categories (AUC > 0.7). AUDIT cut-off points of 6/8 (women/men) for moderate-risk drinking and 13 for alcohol dependence showed sensitivity/specificity of 76.2%/78.9% and 56%/97.5%, respectively. The online version of the AUDIT is useful for detecting alcohol consumption categories and alcohol dependence in Spanish university students.This research was funded by Fondo de Investigacion Sanitaria, Instituto de Salud Carlos III FEDER (PI13/00343); Ministerio de Sanidad, Consumo y Bienestar Social, Plan Nacional Sobre Drogas PNSD (exp.2015I015); and from the DIUE of the Generalitat de Catalunya (2017SGR452). L. Ballester was supported by an FPU grant (FPU15/05728); M. J. Blasco was supported by a Rio Hortega grant (ISCIII, CM14/00125); P. Castellvi was supported by a Sara Borrell grant (ISCIII, CD12/00440), the European Regional Development Fund (ERDF), the European Commission, the University of Jaen, Spain (R08/06/2018) and the Instituto de Estudios Giennenses; and P. Mortier was supported by a Sara Borrell grant (ISCIII, CD18/00049)

Targeted deep sequencing improves outcome stratification in chronic myelomonocytic leukemia with low risk cytogenetic features

Clonal cytogenetic abnormalities are found in 20-30% of patients with chronic myelomonocytic leukemia (CMML), while gene mutations are present in >90% of cases. Patients with low risk cytogenetic features account for 80% of CMML cases and often fall into the low risk categories of CMML prognostic scoring systems, but the outcome differs considerably among them. We performed targeted deep sequencing of 83 myeloid-related genes in 56 CMML patients with low risk cytogenetic features or uninformative conventional cytogenetics (CC) at diagnosis, with the aim to identify the genetic characteristics of patients with a more aggressive disease. Targeted sequencing was also performed in a subset of these patients at time of acute myeloid leukemia (AML) transformation. Overall, 98% of patients harbored at least one mutation. Mutations in cell signaling genes were acquired at time of AML progression. Mutations in ASXL1, EZH2 and NRAS correlated with higher risk features and shorter overall survival (OS) and progression free survival (PFS). Patients with SRSF2 mutations associated with poorer OS, while absence of TET2 mutations (TET2wt) was predictive of shorter PFS. A decrease in OS and PFS was observed as the number of adverse risk gene mutations (ASXL1, EZH2, NRAS and SRSF2) increased. On multivariate analyses, CMML-specific scoring system (CPSS) and presence of adverse risk gene mutations remained significant for OS, while CPSS and TET2wt were predictive of PFS. These results confirm that mutation analysis can add prognostic value to patients with CMML and low risk cytogenetic features or uninformative CC