Ocean acidification affects the phyto-zoo plankton trophic transfer efficiency

The critical role played by copepods in ocean ecology and biogeochemistry warrants an understanding of how these animals may respond to ocean acidification (OA). Whilst an appreciation of the potential direct effects of OA, due to elevated pCO2, on copepods is improving, little is known about the indirect impacts acting via bottom-up (food quality) effects. We assessed, for the first time, the chronic effects of direct and/or indirect exposures to elevated pCO2 on the behaviour, vital rates, chemical and biochemical stoichiometry of the calanoid copepod Acartia tonsa. Bottom-up effects of elevated pCO2 caused species-specific biochemical changes to the phytoplanktonic feed, which adversely affected copepod population structure and decreased recruitment by 30%. The direct impact of elevated pCO2 caused gender-specific respiratory responses in A.tonsa adults, stimulating an enhanced respiration rate in males (> 2-fold), and a suppressed respiratory response in females when coupled with indirect elevated pCO2 exposures. Under the combined indirect+direct exposure, carbon trophic transfer efficiency from phytoplankton-to-zooplankton declined to < 50% of control populations, with a commensurate decrease in recruitment. For the first time an explicit role was demonstrated for biochemical stoichiometry in shaping copepod trophic dynamics. The altered biochemical composition of the CO2-exposed prey affected the biochemical stoichiometry of the copepods, which could have ramifications for production of higher tropic levels, notably fisheries. Our work indicates that the control of phytoplankton and the support of higher trophic levels involving copepods have clear potential to be adversely affected under future OA scenarios

What goes in, must come out:combining scat-based molecular diet analysis and quantification of ingested microplastics in a marine top predator

Context: Microplastics (plastic particles &lt;5 mm in size) are highly available for ingestion by a wide range of organisms, either through direct consumption or indirectly, via trophic transfer, from prey to predator. The latter is a poorly understood, but potentially major, route of microplastic ingestion for marine top predators.Approach: We developed a novel and effective methodology pipeline to investigate dietary exposure of wild top predators (grey seals; Halichoerus grypus) to microplastics, by combining scat-based molecular techniques with a microplastic isolation method. We employed DNA metabarcoding, a rapid method of biodiversity assessment, to garner detailed information on prey composition from scats, and investigated the potential relationship between diet and microplastic burden.Results: Outcomes of the method development process and results of both diet composition from metabarcoding analysis and detection of microplastics are presented. Importantly, the pipeline performed well and initial results suggest the frequency of microplastics detected in seal scats may be related to the type of prey consumed. Conclusions: Our non-invasive, data rich approach maximises time and resource-efficiency, while minimising costs and sample volumes required for analysis. This pipeline could be used to underpin a much-needed increase in understanding of the relationship between diet composition and rates of microplastic ingestion in high trophic-level species.<br/

Microplastics and seafood: lower trophic organisms at highest risk of contamination

Microplastic debris is a prevalent global pollutant that poses a risk to marine organisms and ecological processes. It is also suspected to pose a risk to marine food security; however, these risks are currently poorly understood. In this review, we seek to understand the current knowledge pertaining to the contamination of commercially important fished and farmed marine organisms with microplastics, with the aim of answering the question “Does microplastic pollution pose a risk to marine food security?“. A semi-systematic review of studies investigating the number of microplastics found in commercially important organisms of different trophic levels suggests that microplastics do not biomagnify, and that organisms at lower trophic levels are more likely to contaminated by microplastic pollution than apex predators. We address the factors that influence microplastic consumption and retention by organisms. This research has implications for food safety and highlights the risks of microplastics to fisheries and aquaculture, and identifies current knowledge gaps within this research field

De novo transcriptome assembly and gene expression profiling of the copepod Calanus helgolandicus feeding on the PUA-producing diatom Skeletonema marinoi

Diatoms are the dominant component of the marine phytoplankton. Several diatoms produce secondary metabolites, namely oxylipins, with teratogenic effects on their main predators, crustacean copepods. Our study reports the de novo assembled transcriptome of the calanoid copepod Calanus helgolandicus feeding on the oxylipin-producing diatom Skeletonema marinoi. Differential expression analysis was also performed between copepod females exposed to the diatom and the control flagellate Prorocentrum minimum, which does not produce oxylipins. Our results showed that transcripts involved in carbohydrate, amino acid, folate and methionine metabolism, embryogenesis, and response to stimulus were differentially expressed in the two conditions. Expression of 27 selected genes belonging to these functional categories was also analyzed by RT-qPCR in C. helgolandicus females exposed to a mixed solution of the oxylipins heptadienal and octadienal at the concentration of 10 \ub5M, 15 \ub5M, and 20 \ub5M. The results confirmed differential expression analysis, with up-regulation of genes involved in stress response and down-regulation of genes associated with folate and methionine metabolism, embryogenesis, and signaling. Overall, we offer new insights on the mechanism of action of oxylipins on maternally-induced embryo abnormality. Our results may also help identify biomarker genes associated with diatom-related reproductive failure in the natural copepod population at sea

Micromanipulation at an infertility centre

Aim. Human in vitro fertilisation (IVF) and gamete intrafallopian transfer have been used in the management of various forms of infertility. In cases of severe male-factor infertility, fertilisation can be a factor. In this study micromanipulation was used to increase fertilisation in such cases.Methods. Two micromanipulation techniques, subzonal sperm injection (SUZI) and partial zona dissection (PZD), were used to assist fertilisation in patients with abnorTl)al semen parameters. Ten couples with severe oligo-, teratoand asthenozoospermia participated in the SUZI programme. Seventy-three oocytes were obtained from these 10 patients. PZD was used on day 1 oocytes in cases of male infertility as well as a rescue attempt on day 2 oocytes when fertilisation had failed after routine insemination.Results. The SUZI technique had a fertilisation rate of 37,7%. In this group, a biochemical pregnancy was achieved. Differences between the fertilisation rate of conventionallVF (33,3%) and PZD (56,3%) in cases of male infertility, were not statistically significant although a clinical difference could be detected. PZD was statistically effective in facilitating fertilisation (37,5% v. 8,3%) in couples where this procedure was introduced to reinseminate 24-hour-old unfertilised oocytes. Four patients received PZD reinseminated embryos. An average of 1,45 PZD embryos were replaced and 1 implantation pregnancy was confirmed.Conclusion. The micromanipulation results are encouraging arid seemed to increase the efficiency of IVF in humans. Furthermore, our data support the conclusion that micromanipulation procedures can bring about pregnancies

Integrating conventional microscopy and molecular analysis to analyse the abundance and distribution of four Calanus congeners in the North Atlantic

Analysis of the demographic structure of Calanus species in the North Atlantic presents particular difficulties due to the overlapping spatial distributions of four main congeneric species (Calanus finmarchicus, Calanus helgolandicus, Calanus glacialis and Calanus hyperboreus). These species have similar morphologies, making microscopic discrimination only possible between some of the species at late copepodite or adult stages. However, molecular techniques now offer the possibility of screening significant numbers of specimens and unambiguously identifying them to species, regardless of developmental stage. Unfortunately, the processing rate of specimens by molecular methods is still too low to offer a realistic alternative to microscopy for analysis of samples from large field surveys. Here, we outline and test an approach involving the use of molecular methodology in conjunction with conventional microscopy to assess the species assignment of developmental stage abundances of Calanus congeners. Our study has highlighted many important methodological issues. First, it cannot be assumed that the species composition is homogeneous across the development stages; applying proportional species composition of adults to morphologically undistinguishable earlier development stages can result in error. The second important conclusion is that prosome length may be a highly unreliable discriminator of C. finmarchicus and C. glaciali

Microplastic shape influences fate in vegetated wetlands

Coastal areas are prone to plastic accumulation due to their proximity to land based sources. Coastal vegetated habitats (e.g., seagrasses, saltmarshes, mangroves) provide a myriad of ecosystem functions, such as erosion protection, habitat refuge, and carbon storage. The biological and physical factors that underlie these functions may provide an additional benefit: trapping of marine microplastics. While microplastics occurrence in coastal vegetated sediments is well documented, there is conflicting evidence on whether the presence of vegetation enhances microplastics trapping relative to bare sites and the factors that influence microplastic trapping remain understudied. We investigated how vegetation structure and microplastic type influences trapping in a simulated coastal wetland. Through a flume experiment, we measured the efficiency of microplastic trapping in the presence of branched and grassy vegetation and tested an array of microplastics that differ in shape, size, and polymer. We observed that the presence of vegetation did not affect the number of microplastics trapped but did affect location of deposition. Microplastic shape, rather than polymer, was the dominant factor in determining whether microplastics were retained in the sediment or adhered to the vegetation canopy. Across the canopy, microfibre concentrations decreased from the leading edge to the interior which suggests that even on a small-scale, vegetation has a filtering effect. The outcome of this study enriches our understanding of coastal vegetation as a microplastics sink and that differences among microplastics informs where they are most likely to accumulate within a biogenic canopy

HPV vaccine : can we afford to hesitate?

CITATION: Richter, K. L., Dreyer, G., Lindeque, B. G. and Botha, M. H. 2014. HPV vaccine: can we afford to hesitate? South African Medical Journal, 104(8):522-523, doi:10.7196/SAMJ.8449.The original publication is available at http://www.samj.org.zaNo abstract.http://www.samj.org.za/index.php/samj/article/view/8449Publisher's versio

Plastic and marine turtles: a review and call for research

Plastic debris is now ubiquitous in the marine environment affecting a wide range of taxa, from microscopic zooplankton to large vertebrates. Its persistence and dispersal throughout marine ecosystems has meant that sensitivity toward the scale of threat is growing, particularly for species of conservation concern, such as marine turtles. Their use of a variety of habitats, migratory behaviour, and complex life histories leave them subject to a host of anthropogenic stressors, including exposure to marine plastic pollution. Here, we review the evidence for the effects of plastic debris on turtles and their habitats, highlight knowledge gaps, and make recommendations for future research. We found that, of the seven species, all are known to ingest or become entangled in marine debris. Ingestion can cause intestinal blockage and internal injury, dietary dilution, malnutrition, and increased buoyancy which in turn can result in poor health, reduced growth rates and reproductive output, or death. Entanglement in plastic debris (including ghost fishing gear) is known to cause lacerations, increased drag—which reduces the ability to forage effectively or escape threats—and may lead to drowning or death by starvation. In addition, plastic pollution may impact key turtle habitats. In particular, its presence on nesting beaches may alter nest properties by affecting temperature and sediment permeability. This could influence hatchling sex ratios and reproductive success, resulting in population level implications. Additionally, beach litter may entangle nesting females or emerging hatchlings. Lastly, as an omnipresent and widespread pollutant, plastic debris may cause wider ecosystem effects which result in loss of productivity and implications for trophic interactions. By compiling and presenting this evidence, we demonstrate that urgent action is required to better understand this issue and its effects on marine turtles, so that appropriate and effective mitigation policies can be developed

Detection and characterisation of microplastics and microfibres in fishmeal and soybean meal

Aquaculture is an increasingly important source of nutrition for global food security, which is reliant on animal- and plant-based feeds. Anthropogenic particles, including microplastics and semi-synthetic cellulosic fibres, are prolific marine pollutants that are readily consumed by marine organisms, including small pelagic fish commonly used in fishmeal. Conversely, there is no indication plants can accumulate anthropogenic microparticles. We explore whether aquaculture feed presents a route of contamination for farmed fish. Commercially-sourced aquaculture feedstocks, including fishmeals and soybean meal, were processed (KOH digestion and ZnCl2 density separation) and anthropogenic particles characterised using microscopy and spectroscopic methods. Both fishmeal and soybean meals contained anthropogenic particles, with concentrations ranging 1070–2000 particles kg−1. The prevalence of anthropogenic particles in plant-based feeds indicates that the majority of contamination occurs post-harvest. Based on our findings, farmed Atlantic salmon may be exposed to a minimum of 1788–3013 anthropogenic particles from aquaculture feed across their commercial lifespan