Geodynamics of synconvergent extension and tectonic mode switching: Constraints from the Sevier-Laramide orogen

Many orogenic belts experience alternations in shortening and extension (tectonic mode switches) during continuous plate convergence. The geodynamics of such alternations are not well understood. We present a record of Late Cretaceous to Eocene alternations of shortening and extension from the interior of the retroarc Sevier-Laramide orogen of the western United States. We integrate new Lu-Hf garnet geochronometry with revised PT paths utilizing differential thermobarometry combined with isochemical G-minimization plots, and monazite Th-Pb inclusion geochronometry to produce a well-constrained “M” shaped PTt path. Two burial events (86 and 65 Ma) are separated by ∼3 kbar of decompression. The first burial episode is Late Cretaceous, records a 2 kbar pressure increase at ∼515–550 °C and is dated by a Lu-Hf garnet isochron age of 85.5 ± 1.9 Ma (2σ); the second burial episode records ∼1 kbar of pressure increase at ∼585–615 °C, and is dated by radially decreasing Th-Pb ages of monazite inclusions in garnet between ∼65 and 45 Ma. We propose a synconvergent lithospheric delamination cycle, superimposed on a dynamic orogenic wedge, as a viable mechanism. Wedge tapers may evolve from critical to subcritical (amplification), to supercritical (separation), and back to subcritical (re-equilibration) owing to elevation changes resulting from isostatic adjustments during the amplification and separation of Rayleigh-Taylor instabilities, and post-separation thermal and rheological re-equilibration. For the Sevier-Laramide hinterland, the sequence of Late Cretaceous delamination, low-angle subduction, and slab rollback/foundering during continued plate convergence explains the burial-exhumation-burial-exhumation record and the “M-shaped” PTt path

Midkine-A functions upstream of Id2a to regulate cell cycle kinetics in the developing vertebrate retina

BACKGROUND: Midkine is a small heparin binding growth factor expressed in numerous tissues during development. The unique midkine gene in mammals has two paralogs in zebrafish: midkine-a (mdka) and midkine-b (mdkb). In the zebrafish retina, during both larval development and adult photoreceptor regeneration, mdka is expressed in retinal stem and progenitor cells and functions as a molecular component of the retina’s stem cell niche. In this study, loss-of-function and conditional overexpression were used to investigate the function of Mdka in the retina of the embryonic zebrafish. RESULTS: The results show that during early retinal development Mdka functions to regulate cell cycle kinetics. Following targeted knockdown of Mdka synthesis, retinal progenitors cycle more slowly, and this results in microphthalmia, a diminished rate of cell cycle exit and a temporal delay of cell cycle exit and neuronal differentiation. In contrast, Mdka overexpression results in acceleration of the cell cycle and retinal overgrowth. Mdka gain-of-function, however, does not temporally advance cell cycle exit. Experiments to identify a potential Mdka signaling pathway show that Mdka functions upstream of the HLH regulatory protein, Id2a. Gene expression analysis shows Mdka regulates id2a expression, and co-injection of Mdka morpholinos and id2a mRNA rescues the Mdka loss-of-function phenotype. CONCLUSIONS: These data show that in zebrafish, Mdka resides in a shared Id2a pathway to regulate cell cycle kinetics in retinal progenitors. This is the first study to demonstrate the function of Midkine during retinal development and adds Midkine to the list of growth factors that transcriptionally regulate Id proteins

Synthesis and gas separation properties of poly(ionic liquid)-ionic liquid composite membranes containing a copper salt

Composite poly(ionic liquid)-ionic liquid membranes containing copper (I) chloride (CuCl) have been successfully fabricated via photopolymerization of an IL monomer, 1-vinyl-3-butylimidazolium bistriflimide ([C4vim][Tf2N]), in the presence of CuCl and a non-polymerizable IL, 1-butyl-3-methylimidazolium chloride ([C4mim][Cl]), forming the chlorocuprate anion ([CuCl2]-) in situ. The influence of the metal salt content on the gas separation performance of the composite membranes was assessed. Results showed that increasing the content of non-polymerizable IL enhanced the permeabilities of CO2, H2, N2 and CO relative to those obtained in the pristine poly([C4vim][Tf2N]); whereas the addition of CuCl induced a general reduction of gas diffusivity. On the whole, an enhancement of both gas permeability and ideal gas pair selectivity were observed for CO2/N2 and H2/N2 separations in the Cu-containing composite membranes with respect to the neat poly([C4vim][Tf2N]).Financial support from the Spanish Ministry of Economy and Competitiveness (MINECO) under projects CTQ2012-31639 at the Universidad de Cantabria is gratefully acknowledged. Additional support from the American Chemical Society – Petroleum Research Fund (ACS-PRF 52190-DNI9) is acknowledged

Recovery of magnetic catalysts: advanced design for process intensification

The design of microdevices in which components with magnetic character must be separated and recovered from reactive media benefits from the advantages of microfluidics and meets the criteria for process intensification; however, there are open questions, such as the design of the most appropriate magnet arrangement, that need further research in order to increase the magnetic gradient exerted on the particles. Herein, we focus on the continuous recovery of magnetic microparticles, that can be used as support to facilitate the recovery of biocatalysts (magnetic microcatalysts, MMCs) from biological fluids. We analyze and compare the performance of two typical magnetophoretic microdevices for addressing bead recovery: (i) annular channels with a quadrupole orientation of the permanent magnets (quadrupole magnetic sorter, QMS) and (ii) the standard design, which consists of rectangular channels with a single permanent magnet to generate the magnetic field. To this end, an experimentally validated computational fluid dynamics (CFD) numerical model has been employed. Our results reveal that for devices with the same width and length, the micro QMS, in comparison to a rectangular channel, could accomplish the complete particle retrieval while (i) processing more than 4 times higher fluid velocities, treating more than 360 times higher flow rates or (ii) working with smaller particles, thus reducing by 55% the particle mass. Additionally, the parallel performance of +/-300 micro-QMSs fulfills the processing of flow rates as high as 200 L·h-1 while entirely capturing the magnetic beads. Thereby, this work shows the potential of the QMS advanced design in the intensification of the recovery of catalysts supports of magnetic character.Financial support from the Spanish Ministry of Science, Innovation and Universities under the project RTI2018- 093310-B-I00 is gratefully acknowledged. Cristina González-Fernández acknowledges the FPU (FPU18/03525) postgraduate research grants. We also wish to thank the United States National Institutes of Health (1R01HL131720-01A1, CA62349) and the United States Defense Advanced Research Projects Agency (BAA07-21) for financial assistance

Reviews and syntheses: Soil responses to manipulated precipitation changes – an assessment of meta-analyses

In the face of ongoing and projected climatic changes, precipitation manipulation experiments (PMEs) have produced a wealth of data about the effects of precipitation changes on soils. In response, researchers have undertaken a number of synthetic efforts. Several meta-analyses have been conducted, each revealing new aspects of soil responses to precipitation changes. Here, we conducted a comparative analysis of the findings of 16 meta-analyses focused on the effects of precipitation changes on 42 soil response variables, covering a wide range of soil processes. We examine responses of individual variables as well as more integrative responses of carbon and nitrogen cycles. We find strong agreement among meta-analyses that belowground carbon and nitrogen cycling accelerate under increased precipitation and slow under decreased precipitation, while bacterial and fungal communities are relatively resistant to decreased precipitation. Much attention has been paid to fluxes and pools in carbon, nitrogen, and phosphorus cycles, such as gas emissions, soil carbon, soil phosphorus, extractable nitrogen ions, and biomass. The rates of processes underlying these variables (e.g., mineralization, fixation, and (de)nitrification) are less frequently covered in meta-analytic studies, with the major exception of respiration rates. Shifting scientific attention to these less broadly evaluated processes would deepen the current understanding of the effects of precipitation changes on soil and provide new insights. By jointly evaluating meta-analyses focused on a wide range of variables, we provide here a holistic view of soil responses to changes in precipitation

Continuous-flow separation of magnetic particles from biofluids: how does the microdevice geometry determine the separation performance?

The use of functionalized magnetic particles for the detection or separation of multiple chemicals and biomolecules from biofluids continues to attract significant attention. After their incubation with the targeted substances, the beads can be magnetically recovered to perform analysis or diagnostic tests. Particle recovery with permanent magnets in continuous-flow microdevices has gathered great attention in the last decade due to the multiple advantages of microfluidics. As such, great efforts have been made to determine the magnetic and fluidic conditions for achieving complete particle capture; however, less attention has been paid to the effect of the channel geometry on the system performance, although it is key for designing systems that simultaneously provide high particle recovery and flow rates. Herein, we address the optimization of Y-Y-shaped microchannels, where magnetic beads are separated from blood and collected into a buffer stream by applying an external magnetic field. The influence of several geometrical features (namely cross section shape, thickness, length, and volume) on both bead recovery and system throughput is studied. For that purpose, we employ an experimentally validated Computational Fluid Dynamics (CFD) numerical model that considers the dominant forces acting on the beads during separation. Our results indicate that rectangular, long devices display the best performance as they deliver high particle recovery and high throughput. Thus, this methodology could be applied to the rational design of lab-on-a-chip devices for any magnetically driven purification, enrichment or isolation.This research was funded by the Spanish Ministry of Science, Innovation and Universities under the project RTI2018-093310-B-I00, and the FPU and FPI postgraduate research grants (FPU18/03525; BES-2016-077206). Financial support from the National Heart, Lung, and Blood Institute from the United States National Institutes of Health (1R01HL131720-01A1) has also been receive

Polydnaviral Ankyrin Proteins Aid Parasitic Wasp Survival by Coordinate and Selective Inhibition of Hematopoietic and Immune NF-kappa B Signaling in Insect Hosts

Polydnaviruses are mutualists of their parasitoid wasps and express genes in immune cells of their Lepidopteran hosts. Polydnaviral genomes carry multiple copies of viral ankyrins or vankyrins. Vankyrin proteins are homologous to IκB proteins, but lack sequences for regulated degradation. We tested if Ichnoviral Vankyrins differentially impede Toll-NF-κB-dependent hematopoietic and immune signaling in a heterologous in vivo Drosophila, system. We first show that hematopoiesis and the cellular encapsulation response against parasitoid wasps are tightly-linked via NF-κB signaling. The niche, which neighbors the larval hematopoietic progenitors, responds to parasite infection. Drosophila NF-κB proteins are expressed in the niche, and non cell-autonomously influence fate choice in basal and parasite-activated hematopoiesis. These effects are blocked by the Vankyrin I2-vank-3, but not by P-vank-1, as is the expression of a NF-κB target transgene. I2-vank-3 and P-vank-1 differentially obstruct cellular and humoral inflammation. Additionally, their maternal expression weakens ventral embryonic patterning. We propose that selective perturbation of NF-κB-IκB interactions in natural hosts of parasitic wasps negatively impacts the outcome of hematopoietic and immune signaling and this immune deficit contributes to parasite survival and species success in nature

Maternal underweight and obesity and risk of orofacial clefts in a large international consortium of population-based studies

Background: Evidence on association of maternal pre-pregnancy weight with risk of orofacial clefts is inconsistent

The Suppressor of AAC2 Lethality SAL1 Modulates Sensitivity of Heterologously Expressed Artemia ADP/ATP Carrier to Bongkrekate in Yeast

The ADP/ATP carrier protein (AAC) expressed in Artemia franciscana is refractory to bongkrekate. We generated two strains of Saccharomyces cerevisiae where AAC1 and AAC3 were inactivated and the AAC2 isoform was replaced with Artemia AAC containing a hemagglutinin tag (ArAAC-HA). In one of the strains the suppressor of ΔAAC2 lethality, SAL1, was also inactivated but a plasmid coding for yeast AAC2 was included, because the ArAACΔsal1Δ strain was lethal. In both strains ArAAC-HA was expressed and correctly localized to the mitochondria. Peptide sequencing of ArAAC expressed in Artemia and that expressed in the modified yeasts revealed identical amino acid sequences. The isolated mitochondria from both modified strains developed 85% of the membrane potential attained by mitochondria of control strains, and addition of ADP yielded bongkrekate-sensitive depolarizations implying acquired sensitivity of ArAAC-mediated adenine nucleotide exchange to this poison, independent from SAL1. However, growth of ArAAC-expressing yeasts in glycerol-containing media was arrested by bongkrekate only in the presence of SAL1. We conclude that the mitochondrial environment of yeasts relying on respiratory growth conferred sensitivity of ArAAC to bongkrekate in a SAL1-dependent manner. © 2013 Wysocka-Kapcinska et al

The ecology of peace : preparing Colombia for new political and planetary climates

ABSTRACT: Colombia, one of the world’s most species-rich nations, is currently undergoing a profound social transition: the end of a decadeslong conflict with the Revolutionary Armed Forces of Colombia, known as FARC. The peace agreement process will likely transform the country’s physical and socioeconomic landscapes at a time when humans are altering Earth’s atmosphere and climate in unprecedented ways. We discuss ways in which these transformative events will act in combination to shape the ecological and environmental future of Colombia. We also highlight the risks of creating perverse development incentives in these critical times, along with the potential benefits – for the country and the world – if Colombia can navigate through the peace process in a way that protects its own environment and ecosystems