Optical properties of aerosol particles over the Amazon rain forest: From background to biomass burning conditions

Atmospheric aerosols over the Amazon rainforest are strongly influenced by biomass burning activities in the southern regions of the Amazon Basin between July and October. This implies a complete change of the physical and chemical aerosol properties from the wet season, which is dominated by Primary Biological Aerosol Particles (PBAP) and biogenic secondary organic aerosols. Biomass burning emissions are highly loaded with light-absorbing aerosols, like black and brown carbon (BC and BrC, respectively). The latter one consists of a fraction of organic carbon that is able to absorb visible radiation (Andreae and Gelencs\ue9r, 2006). BrC is a strong absorber at near-UV to UV wavelengths. Therefore, light absorption by this component is wavelength dependent. This wavelength dependency, expressed as the absorption \uc5ngstr\uf6m exponent (AAE), has been used as a parameter to estimate the influence of biomass burning aerosols to total aerosol light absorption. However, the biogenic BrC contribution remains to be studied and could be significant under pristine conditions. The measurements presented here were carried out at the Amazon Tall Tower Observatory (ATTO), located 150 km NE of the city of Manaus, in the Uatum\ue3 Sustainable Development Reserve in Amazonas State, Brazil. The aerosol inlet (60 m high, 2.5 cm diameter) is installed on an 81-m triangular mast. The measurement period, from June to September 2014, includes the wetto- dry transition season (June-July) and part of the dry season (August and beginning of September). The optical properties were measured online by different instruments: 3-wavelengths nephelometer, Multi-Angle Absorption Photometer (MAAP), Single Particle Soot Photometer (SP2) and a 7-wavelength Aethalometer. Additionally, MAAP filter samples were analyzed by the Multi-Wavelength Absorbance Analyzer (MWAA) (Massab\uf2 et al, 2013), as well as levoglucosan analysis was carried out for filters collected between 18-22 August 2014. The average light absorption coefficient at 637 nm was 1.0 \ub1 0.6 Mm-1 and 5.5 \ub1 3.9 Mm-1, during the wet-to-dry transition and the dry season, respectively. Here we concentrate on measurements during 18-22 August 2014 (Figure 1) when a high absorption coefficient was measured at 637 nm, averaging 10 \ub1 3 Mm-1. The AAE calculated from MWAA measurements increased from less than 1.0 to values higher than 1.4, indicating the presence of BrC aerosol particles. This period is characterized by a long-range transport of biomass burning aerosol (confirmed by backward trajectory analysis). Levoglucosan analysis reveals significantly increased concentration but is still relatively low compared to measurements close to the source (Graham et al, 2002). Nevertheless, AAE and levoglucosan concentration show a significant correlation (r\ub2 > 0.9)

Erratum: Author Correction: Identification of genes required for eye development by high-throughput screening of mouse knockouts.

[This corrects the article DOI: 10.1038/s42003-018-0226-0.]

The Role of Eif6 in Skeletal Muscle Homeostasis Revealed by Endurance Training Co-expression Networks

Regular endurance training improves muscle oxidative capacity and reduces the risk of age-related disorders. Understanding the molecular networks underlying this phenomenon is crucial. Here, by exploiting the power of computational modeling, we show that endurance training induces profound changes in gene regulatory networks linking signaling and selective control of translation to energy metabolism and tissue remodeling. We discovered that knockdown of the mTOR-independent factor Eif6, which we predicted to be a key regulator of this process, affects mitochondrial respiration efficiency, ROS production, and exercise performance. Our work demonstrates the validity of a data-driven approach to understanding muscle homeostasis

Disruption of paternal circadian rhythm affects metabolic health in male offspring via nongerm cell factors

Circadian rhythm synchronizes each body function with the environment and regulates physiology. Disruption of normal circadian rhythm alters organismal physiology and increases disease risk. Recent epidemiological data and studies in model organisms have shown that maternal circadian disruption is important for offspring health and adult phenotypes. Less is known about the role of paternal circadian rhythm for offspring health. Here, we disrupted circadian rhythm in male mice by night-restricted feeding and showed that paternal circadian disruption at conception is important for offspring feeding behavior, metabolic health, and oscillatory transcription. Mechanistically, our data suggest that the effect of paternal circadian disruption is not transferred to the offspring via the germ cells but initiated by corticosterone-based parental communication at conception and programmed during in utero development through a state of fetal growth restriction. These findings indicate paternal circadian health at conception as a newly identified determinant of offspring phenotypes

Normalised model-based processing diagrams for additive layer manufacture of engineering alloys

Additive Layer Manufacturing (ALM) is becoming a more widely accepted method for the production of near net-shape products across a range of industries and alloys. Depending on the end application, a level of process substantiation is required for new parts or alloys. Prior knowledge of the likely process parameter ranges that will provide a target region for the process integrity can save valuable time and resource during initial ALM trials. In this paper, the parameters used during the powder bed ALM process have been taken from the literature and the present study to construct normalised process maps for the ALM process by building on an approach taken by Ion et al. in the early 1990's (J.C. Ion, H.R. Shercliff, M.F. Ashby, Acta Metallurgica et Materialia 40 (1992) 1539e1551). These process maps present isopleths of normalised equivalent energy density (E0*) and are designed to provide a practical framework for comparing a range of ALM platforms, alloys and process parameters and provide a priori information on microstructure. The diagrams provide a useful reference and methodology to aid in the selection of appropriate processing parameters during the early development stages. This paper also applies the methodology to worked examples of Tie6Ale4V depositions processed using different Electron Beam Melting parameters

Determining the neurotransmitter concentration profile at active synapses

Establishing the temporal and concentration profiles of neurotransmitters during synaptic release is an essential step towards understanding the basic properties of inter-neuronal communication in the central nervous system. A variety of ingenious attempts has been made to gain insights into this process, but the general inaccessibility of central synapses, intrinsic limitations of the techniques used, and natural variety of different synaptic environments have hindered a comprehensive description of this fundamental phenomenon. Here, we describe a number of experimental and theoretical findings that has been instrumental for advancing our knowledge of various features of neurotransmitter release, as well as newly developed tools that could overcome some limits of traditional pharmacological approaches and bring new impetus to the description of the complex mechanisms of synaptic transmission

The occurrence of tarsal injuries in male mice of C57BL/6N substrains in multiple international mouse facilities.

Dislocation in hindlimb tarsals are being observed at a low, but persistent frequency in group-housed adult male mice from C57BL/6N substrains. Clinical signs included a sudden onset of mild to severe unilateral or bilateral tarsal abduction, swelling, abnormal hindlimb morphology and lameness. Contraction of digits and gait abnormalities were noted in multiple cases. Radiographical and histological examination revealed caudal dislocation of the calcaneus and partial dislocation of the calcaneoquartal (calcaneus-tarsal bone IV) joint. The detection, frequency, and cause of this pathology in five large mouse production and phenotyping centres (MRC Harwell, UK; The Jackson Laboratory, USA; The Centre for Phenogenomics, Canada; German Mouse Clinic, Germany; Baylor College of Medicine, USA) are discussed

Genome-wide screening reveals the genetic basis of mammalian embryonic eye development.

BACKGROUND: Microphthalmia, anophthalmia, and coloboma (MAC) spectrum disease encompasses a group of eye malformations which play a role in childhood visual impairment. Although the predominant cause of eye malformations is known to be heritable in nature, with 80% of cases displaying loss-of-function mutations in the ocular developmental genes OTX2 or SOX2, the genetic abnormalities underlying the remaining cases of MAC are incompletely understood. This study intended to identify the novel genes and pathways required for early eye development. Additionally, pathways involved in eye formation during embryogenesis are also incompletely understood. This study aims to identify the novel genes and pathways required for early eye development through systematic forward screening of the mammalian genome. RESULTS: Query of the International Mouse Phenotyping Consortium (IMPC) database (data release 17.0, August 01, 2022) identified 74 unique knockout lines (genes) with genetically associated eye defects in mouse embryos. The vast majority of eye abnormalities were small or absent eyes, findings most relevant to MAC spectrum disease in humans. A literature search showed that 27 of the 74 lines had previously published knockout mouse models, of which only 15 had ocular defects identified in the original publications. These 12 previously published gene knockouts with no reported ocular abnormalities and the 47 unpublished knockouts with ocular abnormalities identified by the IMPC represent 59 genes not previously associated with early eye development in mice. Of these 59, we identified 19 genes with a reported human eye phenotype. Overall, mining of the IMPC data yielded 40 previously unimplicated genes linked to mammalian eye development. Bioinformatic analysis showed that several of the IMPC genes colocalized to several protein anabolic and pluripotency pathways in early eye development. Of note, our analysis suggests that the serine-glycine pathway producing glycine, a mitochondrial one-carbon donator to folate one-carbon metabolism (FOCM), is essential for eye formation. CONCLUSIONS: Using genome-wide phenotype screening of single-gene knockout mouse lines, STRING analysis, and bioinformatic methods, this study identified genes heretofore unassociated with MAC phenotypes providing models to research novel molecular and cellular mechanisms involved in eye development. These findings have the potential to hasten the diagnosis and treatment of this congenital blinding disease