Evidence for suboxic nitrification in recent marine sediments

The classical scheme of biogeochemical zones (BGZ) is known to be an oversimplification of the microbial processes that occur in organic-rich marine sediments. Results from a coupled deployment of pore-water gel probes in Loch Duich, Scotland, provide direct evidence for rapid recycling within the iron reduction (FeR) and sulphate reduction (SR) zones. High resolution porewater profiles obtained using diffusive equilibrium in thin films (DET) gel probes found a nitrate peak at the boundary between the FeR and SR zones. This non-steady state feature is consistent with recycling of reduced N occurring throughout the FeR zone. Both conventional pore-water iron profiles and results from diffusive gradient in thin films (DGT) probes indicate that iron is solubilised and precipitated in rapid Fe/S recycling reactions throughout the SR zone. The presence of such complex recycling reactions confirms the oversimplification of the classical BGZ scheme

Modelling the behaviour of nutrients in the coastal waters of Scotland - an update on inputs from Scottish aquaculture and their impact on eutrophication status

A previous study estimated that salmon farming contributed approximately 6% of Scotland's nitrogen-nutrient input to coastal waters, and 13% of phosphorus (based on 2001 production figures). However, in some areas of the west of Scotland with small freshwater catchment areas and low levels of human habitation, aquaculture inputs represented greater than 80% of the total. In 2002, FRS published results from an ecosystem modelling study involving a collaboration with the Institute for Marine Research, University of Hamburg, and the Macaulay Land Use Research Institute in Aberdeen, to assess the eutrophication impact of various nutrient inputs to Scottish waters. The results suggested that a 50% reduction in aquaculture salmon production would have only a small impact on water quality which would be undetectable against the background of natural variability due to climate variations. Estimating aquaculture nutrient discharge is a difficult task. The 2002 study was based on data relating to the consented biomass of fish at farm sites in sea lochs. Since then, new data have become available on the actual harvest of fish at all sites in Scotland. In this report, we re-assess the salmon production in Scotland in 2001 and the consequent nutrient discharge, and repeat the ecosystem model runs to estimate the impact of reduction scenarios on eutrophication status. The new data indicate that the previous study had overestimated salmon production and nutrient discharge by approximately 18% Scotland wide. Production and discharge at Shetland and in the Southern Hebrides had been under-estimated, whilst that in the Minches had been over-estimated. New runs of the ecosystem model show that the original conclusions on eutrophication impact were sound. A scenario of 50% reduction in salmon production produced regional changes in water quality which were less than 25% of the natural variability due to climate. New runs simulating a cessation of aquaculture showed that even this extreme reduction scenario produced changes in water quality that were less than half the natural variability

Assessing the fugitive emission of CH4 via migration along fault zones – Comparing potential shale gas basins to non-shale basins in the UK

This study considered whether faults bounding hydrocarbon-bearing basins could be conduits for methane release to the atmosphere. Five basin bounding faults in the UK were considered: two which bounded potential shale gas basins; two faults that bounded coal basins; and one that bounded a basin with no known hydrocarbon deposits. In each basin, two mobile methane surveys were conducted, one along the surface expression of the basin bounding fault and one along a line of similar length but not intersecting the fault. All survey data was corrected for wind direction, the ambient CH4 concentration and the distance to the possible source. The survey design allowed for Analysis of Variance and this showed that there was a significant difference between the fault and control survey lines though a significant flux from the fault was not found in all basins and there was no apparent link to the presence, or absence, of hydrocarbons. As such, shale basins did not have a significantly different CH4 flux to non-shale hydrocarbon basins and non-hydrocarbon basins. These results could have implications for CH4 emissions from faults both in the UK and globally. Including all the corrected fault data, we estimate faults have an emissions factor of 11.5 ± 6.3 t CH4/km/yr, while the most conservative estimate of the flux from faults is 0.7 ± 0.3 t CH4/km/yr. The use of isotopes meant that at least one site of thermogenic flux from a fault could be identified. However, the total length of faults that penetrate through-basins and go from the surface to hydrocarbon reservoirs at depth in the UK is not known; as such, the emissions factor could not be multiplied by an activity level to estimate a total UK CH4 flux

Anoxic nitrification in marine sediments

Nitrate peaks are found in pore-water profiles in marine sediments at depths considerably below the conventional zone of oxic nitrification. These have been interpreted to represent nonsteady- state effects produced by the activity of nitrifying bacteria, and suggest that nitrification occurs throughout the anoxic sediment region. In this study, ΣNO3 peaks and molecular analysis of DNA and RNA extracted from anoxic sediments of Loch Duich, an organic-rich marine fjord, are consistent with nitrification occurring in the anoxic zone. Analysis of ammonia oxidiser 16S rRNA gene fragments amplified from sediment DNA indicated the abundance of autotrophic ammonia-oxidising bacteria throughout the sediment depth sampled (40 cm), while RT-PCR analysis indicated their potential activity throughout this region. A large non-steady-state pore-water ΣNO3 peak at ~21 cm correlated with discontinuities in this ammonia-oxidiser community. In addition, a subsurface nitrate peak at ~8 cm below the oxygen penetration depth, correlated with the depth of a peak in nitrification rate, assessed by transformation of 15N-labelled ammonia. The source of the oxidant required to support nitrification within the anoxic region is uncertain. It is suggested that rapid recycling of N is occurring, based on a coupled reaction involving Mn oxides (or possibly highly labile Fe oxides) buried during small-scale slumping events. However, to fully investigate this coupling, advances in the capability of high-resolution pore-water techniques are required

Guidelines for the integrated monitoring and assessment of contaminants and their effects

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Dynamics of Collective Decoherence and Thermalization

We analyze the dynamics of N interacting spins (quantum register) collectively coupled to a thermal environment. Each spin experiences the same environment interaction, consisting of an energy conserving and an energy exchange part. We find the decay rates of the reduced density matrix elements in the energy basis. We show that if the spins do not interact among each other, then the fastest decay rates of off-diagonal matrix elements induced by the energy conserving interaction is of order N^2, while that one induced by the energy exchange interaction is of the order N only. Moreover, the diagonal matrix elements approach their limiting values at a rate independent of N. For a general spin system the decay rates depend in a rather complicated (but explicit) way on the size N and the interaction between the spins. Our method is based on a dynamical quantum resonance theory valid for small, fixed values of the couplings. We do not make Markov-, Born- or weak coupling (van Hove) approximations

Scattering theory for Klein-Gordon equations with non-positive energy

We study the scattering theory for charged Klein-Gordon equations: \{{array}{l} (\p_{t}- \i v(x))^{2}\phi(t,x) \epsilon^{2}(x, D_{x})\phi(t,x)=0,[2mm] \phi(0, x)= f_{0}, [2mm] \i^{-1} \p_{t}\phi(0, x)= f_{1}, {array}. where: \epsilon^{2}(x, D_{x})= \sum_{1\leq j, k\leq n}(\p_{x_{j}} \i b_{j}(x))A^{jk}(x)(\p_{x_{k}} \i b_{k}(x))+ m^{2}(x), describing a Klein-Gordon field minimally coupled to an external electromagnetic field described by the electric potential $v(x)$ and magnetic potential $\vec{b}(x)$. The flow of the Klein-Gordon equation preserves the energy: h[f, f]:= \int_{\rr^{n}}\bar{f}_{1}(x) f_{1}(x)+ \bar{f}_{0}(x)\epsilon^{2}(x, D_{x})f_{0}(x) - \bar{f}_{0}(x) v^{2}(x) f_{0}(x) \d x. We consider the situation when the energy is not positive. In this case the flow cannot be written as a unitary group on a Hilbert space, and the Klein-Gordon equation may have complex eigenfrequencies. Using the theory of definitizable operators on Krein spaces and time-dependent methods, we prove the existence and completeness of wave operators, both in the short- and long-range cases. The range of the wave operators are characterized in terms of the spectral theory of the generator, as in the usual Hilbert space case

Newtonian Collapse of Scalar Field Dark Matter

In this letter, we develop a Newtonian approach to the collapse of galaxy fluctuations of scalar field dark matter under initial conditions inferred from simple assumptions. The full relativistic system, the so called Einstein-Klein-Gordon, is reduced to the Schr\"odinger-Newton one in the weak field limit. The scaling symmetries of the SN equations are exploited to track the non-linear collapse of single scalar matter fluctuations. The results can be applied to both real and complex scalar fields.Comment: 4 pages RevTex4 file, 4 eps figure

Evolution of the Schr\"odinger--Newton system for a self--gravitating scalar field

Using numerical techniques, we study the collapse of a scalar field configuration in the Newtonian limit of the spherically symmetric Einstein--Klein--Gordon (EKG) system, which results in the so called Schr\"odinger--Newton (SN) set of equations. We present the numerical code developed to evolve the SN system and topics related, like equilibrium configurations and boundary conditions. Also, we analyze the evolution of different initial configurations and the physical quantities associated to them. In particular, we readdress the issue of the gravitational cooling mechanism for Newtonian systems and find that all systems settle down onto a 0--node equilibrium configuration.Comment: RevTex file, 19 pages, 26 eps figures. Minor changes, matches version to appear in PR