Retrieval of cloud droplet size from visible and microwave radiometric measurements during INDOEX: Implication to aerosols’ indirect radiative effect

The effective radius of water cloud droplets is retrieved using remotely sensed passive microwave and visible data collected by aircraft during the Indian Ocean Experiment. The purpose of this study is to assess the aerosols’ effect on cloud microphysical and radiative properties. To study this effect, we investigate the relationships among effective radius, liquid water path and number concentration of cloud droplets. The effective radius retrieval uses imager observations of reflected sunlight at 0.64 mm and liquid water path derived frommicrowave measurements. Results of an error analysis show that retrieval error is the largest for thin clouds having small visible reflectances and small liquid water path. For this reason, only pixels with visible reflectances greater than 0.2 are used in our data analysis, so that the maximum RMS error in effective radius is limited to about 4 mm. The relation between liquid water path and effective radius is examined for four different latitudinal regions. Results show that for the same liquid water path, effective radii are significantly smaller in the north than in the south, in correspondence to the north-south gradient of aerosol concentration in this region. In situ aircraft observations reveal larger cloud droplet number concentrations in the north than in the south. The north-south gradient of these variables are consistent with the aerosols’ effect on cloud microphysics, that is, higher aerosol concentration increases the number concentration of cloud droplets, which, in turn, reduces droplet sizes given the same liquid water path and cloud thickness. Results based on comparison between data collected from northern and southern hemispheres suggest that the increase in aerosol number concentration alters cloud droplet numbers and sizes while leaving liquid water contents approximately the same.Keywords: aerosol indirect effect, liquid water path, Indian Ocean Experiment, cloud effective radiusKeywords: aerosol indirect effect, liquid water path, Indian Ocean Experiment, cloud effective radiu

Cloud System Evolution in the Trades (CSET): Following the Evolution of Boundary Layer Cloud Systems with the NSFNCAR GV

The Cloud System Evolution in the Trades (CSET) study was designed to describe and explain the evolution of the boundary layer aerosol, cloud, and thermodynamic structures along trajectories within the North Pacific trade winds. The study centered on seven round trips of the National Science FoundationNational Center for Atmospheric Research (NSFNCAR) Gulfstream V (GV) between Sacramento, California, and Kona, Hawaii, between 7 July and 9 August 2015. The CSET observing strategy was to sample aerosol, cloud, and boundary layer properties upwind from the transition zone over the North Pacific and to resample these areas two days later. Global Forecast System forecast trajectories were used to plan the outbound flight to Hawaii with updated forecast trajectories setting the return flight plan two days later. Two key elements of the CSET observing system were the newly developed High-Performance Instrumented Airborne Platform for Environmental Research (HIAPER) Cloud Radar (HCR) and the high-spectral-resolution lidar (HSRL). Together they provided unprecedented characterizations of aerosol, cloud, and precipitation structures that were combined with in situ measurements of aerosol, cloud, precipitation, and turbulence properties. The cloud systems sampled included solid stratocumulus infused with smoke from Canadian wildfires, mesoscale cloudprecipitation complexes, and patches of shallow cumuli in very clean environments. Ultraclean layers observed frequently near the top of the boundary layer were often associated with shallow, optically thin, layered veil clouds. The extensive aerosol, cloud, drizzle, and boundary layer sampling made over open areas of the northeast Pacific along 2-day trajectories during CSET will be an invaluable resource for modeling studies of boundary layer cloud system evolution and its governing physical processes

LSST Science Book, Version 2.0

A survey that can cover the sky in optical bands over wide fields to faint magnitudes with a fast cadence will enable many of the exciting science opportunities of the next decade. The Large Synoptic Survey Telescope (LSST) will have an effective aperture of 6.7 meters and an imaging camera with field of view of 9.6 deg^2, and will be devoted to a ten-year imaging survey over 20,000 deg^2 south of +15 deg. Each pointing will be imaged 2000 times with fifteen second exposures in six broad bands from 0.35 to 1.1 microns, to a total point-source depth of r~27.5. The LSST Science Book describes the basic parameters of the LSST hardware, software, and observing plans. The book discusses educational and outreach opportunities, then goes on to describe a broad range of science that LSST will revolutionize: mapping the inner and outer Solar System, stellar populations in the Milky Way and nearby galaxies, the structure of the Milky Way disk and halo and other objects in the Local Volume, transient and variable objects both at low and high redshift, and the properties of normal and active galaxies at low and high redshift. It then turns to far-field cosmological topics, exploring properties of supernovae to z~1, strong and weak lensing, the large-scale distribution of galaxies and baryon oscillations, and how these different probes may be combined to constrain cosmological models and the physics of dark energy.Comment: 596 pages. Also available at full resolution at http://www.lsst.org/lsst/sciboo

The Deep Propagating Gravity Wave Experiment (DEEPWAVE): An airborne and ground-based exploration of gravity wave propagation and effects from their sources throughout the lower and middle atmosphere

The Deep Propagating Gravity Wave Experiment (DEEPWAVE) was designed to quantify gravity wave (GW) dynamics and effects from orographic and other sources to regions of dissipation at high altitudes. The core DEEPWAVE field phase took place from May through July 2014 using a comprehensive suite of airborne and ground-based instruments providing measurements from Earth’s surface to ∼100 km. Austral winter was chosen to observe deep GW propagation to high altitudes. DEEPWAVE was based on South Island, New Zealand, to provide access to the New Zealand and Tasmanian “hotspots” of GW activity and additional GW sources over the Southern Ocean and Tasman Sea. To observe GWs up to ∼100 km, DEEPWAVE utilized three new instruments built specifically for the National Science Foundation (NSF)/National Center for Atmospheric Research (NCAR) Gulfstream V (GV): a Rayleigh lidar, a sodium resonance lidar, and an advanced mesosphere temperature mapper. These measurements were supplemented by in situ probes, dropsondes, and a microwave temperature profiler on the GV and by in situ probes and a Doppler lidar aboard the German DLR Falcon. Extensive ground-based instrumentation and radiosondes were deployed on South Island, Tasmania, and Southern Ocean islands. Deep orographic GWs were a primary target but multiple flights also observed deep GWs arising from deep convection, jet streams, and frontal systems. Highlights include the following: 1) strong orographic GW forcing accompanying strong cross-mountain flows, 2) strong high-altitude responses even when orographic forcing was weak, 3) large-scale GWs at high altitudes arising from jet stream sources, and 4) significant flight-level energy fluxes and often very large momentum fluxes at high altitudes

Curie temperatures of titanomagnetite in ignimbrites: Effects of emplacement temperatures, cooling rates, exsolution, and cation ordering

Pumices, ashes, and tuffs from Mt. St. Helens and from Novarupta contain two principal forms of titanomagnetite: homogeneous grains with Curie temperatures in the range 350–500°C and oxyexsolved grains with similar bulk composition, containing ilmenite lamellae and having Curie temperatures above 500°C. Thermomagnetic analyses and isothermal annealing experiments in combination with stratigraphic settings and thermal models show that emplacement temperatures and cooling history may have affected the relative proportions of homogeneous and exsolved grains and have clearly had a strong influence on the Curie temperature of the homogeneous phase. The exsolved grains are most common where emplacement temperatures exceeded 600°C, and in laboratory experiments, heating to over 600°C in air causes the homogeneous titanomagnetites to oxyexsolve rapidly. Where emplacement temperatures were lower, Curie temperatures of the homogeneous grains are systematically related to overburden thickness and cooling timescales, and thermomagnetic curves are generally irreversible, with lower Curie temperatures measured during cooling, but little or no change is observed in room temperature susceptibility. We interpret this irreversible behavior as reflecting variations in the degree of cation ordering in the titanomagnetites, although we cannot conclusively rule out an alternative interpretation involving fine-scale subsolvus unmixing. Shortrange ordering within the octahedral sites may play a key role in the observed phenomena. Changes in the Curie temperature have important implications for the acquisition, stabilization, and retention of natural remanence and may in some cases enable quantification of the emplacement temperatures or cooling rates of volcanic units containing homogeneous titanomagnetites

Longitudinal comparison of the developing gut virome in infants and their mothers.

The human gut virome and its early life development are poorly understood. Prior studies have captured single-point assessments with the evolution of the infant virome remaining largely unexplored. We performed viral metagenomic sequencing on stool samples collected longitudinally from a cohort of 53 infants from age 2 weeks to 3 years (80.7 billion reads), and from their mothers (9.8 billion reads) to examine and compare viromes. The asymptomatic infant virome consisted of bacteriophages, nonhuman dietary/environmental viruses, and human-host viruses, predominantly picornaviruses. In contrast, human-host viruses were largely absent from the maternal virome. Previously undescribed, sequence-divergent vertebrate viruses were detected in the maternal but not infant virome. As infants aged, the phage component evolved to resemble the maternal virome, but by age 3, the human-host component remained dissimilar from the maternal virome. Thus, early life virome development is determined predominantly by dietary, infectious, and environmental factors rather than direct maternal acquisition

Longitudinal comparison of the developing gut virome in infants and their mothers

The virome of the human gut and its development in early life are poorly understood. Here we performed viral metagenomic sequencing on stool samples from a multiethnic, socioeconomically diverse cohort of 53 infants collected longitudinally over their first 3 years of life and their mothers to investigate and compare their viromes. The asymptomatic infant virome consisted of bacteriophages, dietary/environmental viruses, and human pathogenic viruses, in contrast to the material virome, in which sequence reads from human pathogenic viruses were absent or present at extremely low levels. Picornaviruses and phages in the family Microviridae (microviruses) dominated the infant virome, while microviruses and tomato mosaic virus dominated the maternal virome. As the infants aged, the human pathogenic and dietary/environmental virus components remained distinct from the materal virome, while the phage component evolved to become more similar. However, the composition of the evolving infant virome was not determined by the mother and was still maturing to the adult virome at three years of age. Importance The development of the human gut virome in early childhood is poorly understood. Here we use viral metagenomic sequencing in a cohort of 53 infants to the characterize their gut viromes and compare them to their mothers’.. This study finds that the infant virome consists of phages and human pathogenic viruses in asymptomatic individuals and is still maturing into the adult virome at three years of age

The Secondary Production of Ice in Cumulus Experiment (SPICULE)

The secondary ice process (SIP) is a major microphysical process, which can result in rapid enhancement of ice particle concentration in the presence of preexisting ice. SPICULE was conducted to further investigate the effect of collision–coalescence on the rate of the fragmentation of freezing drop (FFD) SIP mechanism in cumulus congestus clouds. Measurements were conducted over the Great Plains and central United States from two coordinated aircraft, the NSF Gulfstream V (GV) and SPEC Learjet 35A, both equipped with state-of-the-art microphysical instrumentation and vertically pointing W- and Ka-band radars, respectively. The GV primarily targeted measurements of subcloud aerosols with subsequent sampling in warm cloud. Simultaneously, the Learjet performed multiple penetrations of the ascending cumulus congestus (CuCg) cloud top. First primary ice was typically detected at temperatures colder than −10°C, consistent with measured ice nucleating particles. Subsequent production of ice via FFD SIP was strongly related to the concentration of supercooled large drops (SLDs), with diameters from about 0.2 to a few millimeters. The concentration of SLDs is directly linked to the rate of collision–coalescence, which depends primarily on the subcloud aerosol size distribution and cloud-base temperature. SPICULE supports previous observational results showing that FFD SIP efficiency could be deduced from the product of cloud-base temperature and maximum diameter of drops measured ~300 m above cloud base. However, new measurements with higher concentrations of aerosol and total cloud-base drop concentrations show an attenuating effect on the rate of coalescence. The SPICULE dataset provides rich material for validation of numerical schemes of collision–coalescence and SIP to improve weather prediction simulations

Metagenomic sequencing of stool samples in Bangladeshi infants: virome association with poliovirus shedding after oral poliovirus vaccination.

The potential role of enteric viral infections and the developing infant virome in affecting immune responses to the oral poliovirus vaccine (OPV) is unknown. Here we performed viral metagenomic sequencing on 3 serially collected stool samples from 30 Bangladeshi infants following OPV vaccination and compared findings to stool samples from 16 age-matched infants in the United States (US). In 14 Bangladeshi infants, available post-vaccination serum samples were tested for polio-neutralizing antibodies. The abundance (p = 0.006) and richness (p = 0.013) of the eukaryotic virome increased with age and were higher than seen in age-matched US infants (p < 0.001). In contrast, phage diversity metrics remained stable and were similar to those in US infants. Non-poliovirus eukaryotic virus abundance (3.68 log10 vs. 2.25 log10, p = 0.002), particularly from potential viral pathogens (2.78log10 vs. 0.83log10, p = 0.002), and richness (p = 0.016) were inversely associated with poliovirus shedding. Following vaccination, 28.6% of 14 infants tested developed neutralizing antibodies to all three Sabin types and also exhibited higher rates of poliovirus shedding (p = 0.020). No vaccine-derived poliovirus variants were detected. These results reveal an inverse association between eukaryotic virome abundance and poliovirus shedding. Overall gut virome ecology and concurrent viral infections may impact oral vaccine responsiveness in Bangladeshi infants