89 research outputs found
Morphological analysis of cells by means of an elastic metric in the shape space
Shape analysis is of great importance in many fields, such as computer vision, medical imaging, and computational biology. This analysis can be performed considering shapes as closed planar curves in the shape space. This approach has been used for the first time to obtain the morphological classification of erythrocytes in digital images of sickle cell disease considering the shape space S1, which has the property of being isometric to an infinite-dimensional Grassmann manifold of two-dimensional subspaces (Younes et al., 2008), without taking advantage of all the features offered by the elastic metric related to the possibility of stretching and bending of the curves. In this paper, we study this deformation in the shape space, S2, which is based on the representation of closed planar curves by means of the square-root velocity function (SRVF) (Srivastava et al., 2011), using the elastic metric of this space to obtain more efficient geodesics and geodesic lengths between planar curves. Supervised classification with this approach achieved an accuracy of 94.3%, classification using templates achieved 94.2% and unsupervised clustering in three groups achieved 94.7%, considering three classes of erythrocytes: normal, sickle, and with other deformations. These results are better than those previously achieved in the morphological analysis of erythrocytes and the method can be used in different applications related to the treatment of sickle cell disease, even in cases where it is necessary to study the process of evolution of the deformation, something that can not be done in a natural way in the feature space
Generalized Linear Models for Geometrical Current predictors. An application to predict garment fit
The aim of this paper is to model an ordinal response variable in terms
of vector-valued functional data included on a vector-valued RKHS. In particular,
we focus on the vector-valued RKHS obtained when a geometrical object (body) is
characterized by a current and on the ordinal regression model. A common way to
solve this problem in functional data analysis is to express the data in the orthonormal
basis given by decomposition of the covariance operator. But our data present very important differences with respect to the usual functional data setting. On the one
hand, they are vector-valued functions, and on the other, they are functions in an
RKHS with a previously defined norm. We propose to use three different bases: the
orthonormal basis given by the kernel that defines the RKHS, a basis obtained from
decomposition of the integral operator defined using the covariance function, and a
third basis that combines the previous two. The three approaches are compared and
applied to an interesting problem: building a model to predict the fit of children’s
garment sizes, based on a 3D database of the Spanish child population. Our proposal
has been compared with alternative methods that explore the performance of other
classifiers (Suppport Vector Machine and k-NN), and with the result of applying
the classification method proposed in this work, from different characterizations of
the objects (landmarks and multivariate anthropometric measurements instead of
currents), obtaining in all these cases worst results
Gauss-Bonnet formulae and rotational integrals in constant curvature spaces
We obtain generalizations of the main result in [10], and then provide geometric interpretations of linear combinations of the mean curvature integrals that appear in the Gauss–Bonnet formula for hypersurfaces in space forms View the MathML source Mλn. Then, we combine these results with classical Morse theory to obtain new rotational integral formulae for the k -th mean curvature integrals of a hypersurface in View the MathML source Mλn.Work supported by the PROMETEOII/2014/062 project and the Spanish Ministry of Science and Innovation Project DPI2013-47279-C2-1-R. We thank Juan José Nuño for his fruitful comments
Curvature approximation from parabolic sectors
We propose an invariant three-point curvature approximation for plane curves based on the arc of a parabolic sector, and we analyze how closely this approximation is to the true curvature of the curve. We compare our results with the obtained with other invariant three-point curvature approximations. Finally, an application is discussed
Harmonic Manifolds and the Volume of Tubes about Curves
H. Hotelling proved that in the n-dimensional Euclidean or spherical space,
the volume of a tube of small radius about a curve depends only on the length
of the curve and the radius. A. Gray and L. Vanhecke extended Hotelling's
theorem to rank one symmetric spaces computing the volumes of the tubes
explicitly in these spaces. In the present paper, we generalize these results
by showing that every harmonic manifold has the above tube property. We compute
the volume of tubes in the Damek-Ricci spaces. We show that if a Riemannian
manifold has the tube property, then it is a 2-stein D'Atri space. We also
prove that a symmetric space has the tube property if and only if it is
harmonic. Our results answer some questions posed by L. Vanhecke, T. J.
Willmore, and G. Thorbergsson.Comment: 17 pages, no figures. This version is different from the journal
versio
A New Geometric Metric in the Shape and Size Space of Curves in R n
Shape analysis of curves in Rn is an active research topic in computer vision. While shape itself is important in many applications, there is also a need to study shape in conjunction with other features, such as scale and orientation. The combination of these features, shape, orientation and scale (size), gives different geometrical spaces. In this work, we define a new metric in the shape and size space, S2, which allows us to decompose S2 into a product space consisting of two components: S4Ă—R, where S4 is the shape space. This new metric will be associated with a distance function, which will clearly distinguish the contribution that the difference in shape and the difference in size of the elements considered makes to the distance in S2, unlike the previous proposals. The performance of this metric is checked on a simulated data set, where our proposal performs better than other alternatives and shows its advantages, such as its invariance to changes of scale. Finally, we propose a procedure to detect outlier contours in S2 considering the square-root velocity function (SRVF) representation. For the first time, this problem has been addressed with nearest-neighbor techniques. Our proposal is applied to a novel data set of foot contours. Foot outliers can help shoe designers improve their designs
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