Superior Mesenteric Artery originating from the celiac axis: A rare vascular anomaly

The knowledge of the vascular anatomy of the concerned region is an important prerequisite for planning surgical intervention. The awareness of the existing vascular anomalies enhances the insight regarding that region. We report a patient undergoing preoperative evaluation with CTA finding of Superior Mesenteric Artery (SMA) originating from the celiac artery. This celiac-mesenteric trunk is rare (<1%)

Trajectory studies of Polar Statospheric Cloud Lidar Observations at Sodankyla (Finland) during SESAME: comparison with box model results of particle evolution

Polar statospheric clouds (PSC) were observed with the milti-wavelengh lidar of the MOANA project during SESAME. The physical state, liquid or solid, of the cloud particles can be inferred from the lidar data. Using isentropic back-trajectories to obtain the thermal history of the sampled air masses, it is possible to reconcile most of the observations with current ideas on PSC formation and evolution. When the cloud particles were identified as liquid, changes in the size distributionof the droplets along the trajectory ewre calculated using micro-physical box model. Backscatter ratios ......Published165-1811.8. Osservazioni di geofisica ambientaleJCR Journalreserve

Prognostic value of prostate circulating cells detection in prostate cancer patients: a prospective study

In clinically organ-confined prostate cancer patients, bloodstream tumour cell dissemination generally occurs, and may be enhanced by surgical prostate manipulation. To evaluate cancer-cell seeding impact upon patient recurrence-free survival, 155 patients were prospectively enrolled then followed. Here, 57 patients presented blood prostate cell shedding preoperatively and intraoperatively (group I). Of the 98 preoperatively negative patients, 53 (54%) remained negative (group II) and 45 (46%) became intraoperatively positive (group III). Median biological and clinical recurrence-free time was far shorter in group I (36.2 months, P<0.0001) than in group II (69.6 months) but did not significantly differ in group II and III (69.6 months vs 65.0). Such 5-year follow-up data show that preoperative circulating prostate cells are an independent prognosis factor of recurrence. Moreover, tumour handling induces cancer-cell seeding but surgical blood dissemination does not accelerate cancer evolution

The influence of the accessory genome on bacterial pathogen evolution

Bacterial pathogens exhibit significant variation in their genomic content of virulence factors. This reflects the abundance of strategies pathogens evolved to infect host organisms by suppressing host immunity. Molecular arms-races have been a strong driving force for the evolution of pathogenicity, with pathogens often encoding overlapping or redundant functions, such as type III protein secretion effectors and hosts encoding ever more sophisticated immune systems. The pathogens’ frequent exposure to other microbes, either in their host or in the environment, provides opportunities for the acquisition or interchange of mobile genetic elements. These DNA elements accessorise the core genome and can play major roles in shaping genome structure and altering the complement of virulence factors. Here, we review the different mobile genetic elements focusing on the more recent discoveries and highlighting their role in shaping bacterial pathogen evolution

Microcin H47 System: An Escherichia coli Small Genomic Island with Novel Features

Genomic islands are DNA regions containing variable genetic information related to secondary metabolism. Frequently, they have the ability to excise from and integrate into replicons through site-specific recombination. Thus, they are usually flanked by short direct repeats that act as attachment sites, and contain genes for an integrase and an excisionase which carry out the genetic exchange. These mobility events would be at the basis of the horizontal transfer of genomic islands among bacteria

Chromosomal-level assembly of the Asian Seabass genome using long sequence reads and multi-layered scaffolding

We report here the ~670 Mb genome assembly of the Asian seabass (Lates calcarifer), a tropical marine teleost. We used long-read sequencing augmented by transcriptomics, optical and genetic mapping along with shared synteny from closely related fish species to derive a chromosome-level assembly with a contig N50 size over 1 Mb and scaffold N50 size over 25 Mb that span ~90% of the genome. The population structure of L. calcarifer species complex was analyzed by re-sequencing 61 individuals representing various regions across the species' native range. SNP analyses identified high levels of genetic diversity and confirmed earlier indications of a population stratification comprising three clades with signs of admixture apparent in the South-East Asian population. The quality of the Asian seabass genome assembly far exceeds that of any other fish species, and will serve as a new standard for fish genomics

Results of a trajectory box model simulating the size distribution evolution of stratospheric particles (H2SO4/H2O and H2SO4/HNO3/H2O solutions). A case study during SESAME

A revised interpretation of ER-2 polar stratospheric cloud (PSC) observations during AASE I (1989) and MOE (1987) Tabazadeh et al., 1995) suggests a picture of the PSC formations which evidences the importance of the air mass thermal histories. A series of ER-2 measurements are consistent with the thennodynamical properties of the liquid H2SO4/HNO3/H20 solution particles, but the data collected in other flights are in agreement with the possible formation of amorphous solid solutions of HNO3 and H2O through a peculiar coolingiheating cycle below the solid sulfuric acid tetrahydrate (SAT) melting temperatures and above the water ice saturation temperatures (frost point). During this cycle the liquid H2SO4 stratospheric aerosols may undergo a phase transition to SAT particles, required for the growing of solid nitric acid hydrates. On the other hand Koop et al., (1995) report laboratory experiments which show that H2SO4/HNO3/H20 liquid particles never freeze under stratospheric conditions for temperatures higher than the frost point. despite the change in composition due to the HNO3 uptake when cooling. In addition, when solid particles are heated, they start to become liquid at the SAT melting point. Then the analysis of any PSC data should start from air mass trajectory studies, and some thermodynamical criteria could be used to infer the physical state (liquid or solid) of the sampled particles. We use a trajectory box model to study the microphysical properties of stratospheric clouds observed during SESAME by the MOANA (Measurements and modelling of Ozone and Aerosols in the Northern Atmosphere) lidar at Sodankyla (SF). Our models treats the gas to particle conversion of H2SO4, HNO3, H2O and the microphysics of Aitken particles (ATK), H2SO4/H20 (WS) and H2SO4/HNO3/H20 (WSN) solution droplets; H2SO4 -nH2O (SA) and HNO3 -nH20 (NA) solid hydrates particles are also taken into account. To analyze the MOANA observations, within a prescribed air mass thermal history, we adopt a simple criteria which states that the particles should be liquid just after having performed temperatures above the SAT melting point. while they are solid if the water ice saturation temperatures are reached. The model simulations along the air mass trajectories reaching the lidar site during the observations are in agreement with the aerosol size distribution optically retrieved by the MOANA multiwavelength lidar (Masci et al., .1995).PublishedSchliersee, Germany1.8. Osservazioni di geofisica ambientaleope

Association between urinary biomarkers of total sugars intake and measures of obesity in a cross-sectional study

Obesity is an important modifiable risk factor for chronic diseases. While there is increasing focus on the role of dietary sugars, there remains a paucity of data establishing the association between sugar intake and obesity in the general public. The objective of this study was to investigate associations of estimated sugar intake with odds for obesity in a representative sample of English adults. We used data from 434 participants of the 2005 Health Survey of England. Biomarkers for total sugar intake were measured in 24 h urine samples and used to estimate intake. Linear and logistic regression analyses were used to investigate associations between biomarker-based estimated intake and measures of obesity (body mass intake (BMI), waist circumference and waist-to-hip ratio) and obesity risk, respectively. Estimated sugar intake was significantly associated with BMI, waist circumference and waist-to-hip ratio; these associations remained significant after adjustment for estimated protein intake as a marker of non-sugar energy intake. Estimated sugar intake was also associated with increased odds for obesity based on BMI (OR 1.02; 95%CI 1.00-1.04 per 10g), waist-circumference (1.03; 1.01-1.05) and waist-to-hip ratio (1.04; 1.02-1.06); all OR estimates remained significant after adjusting for estimated protein intake. Our results strongly support positive associations between total sugar intake, measures of obesity and likelihood of being obese. It is the first time that such an association has been shown in a nationally-representative sample of the general population using a validated biomarker. This biomarker could be used to monitor the efficacy of public health interventions to reduce sugar intake

Stability, Entrapment and Variant Formation of Salmonella Genomic Island 1

<div><h3>Background</h3><p>The <em>Salmonella</em> genomic island 1 (SGI1) is a 42.4 kb integrative mobilizable element containing several antibiotic resistance determinants embedded in a complex integron segment In104. The numerous SGI1 variants identified so far, differ mainly in this segment and the explanations of their emergence were mostly based on comparative structure analyses. Here we provide experimental studies on the stability, entrapment and variant formation of this peculiar gene cluster originally found in <em>S</em>. Typhimurium.</p> <h3>Methodology/Principal Findings</h3><p>Segregation and conjugation tests and various molecular techniques were used to detect the emerging SGI1 variants in <em>Salmonella</em> populations of 17 <em>Salmonella enterica</em> serovar Typhimurium DT104 isolates from Hungary. The SGI1s in these isolates proved to be fully competent in excision, conjugal transfer by the IncA/C helper plasmid R55, and integration into the <em>E. coli</em> chromosome. A trap vector has been constructed and successfully applied to capture the island on a plasmid. Monitoring of segregation of SGI1 indicated high stability of the island. SGI1-free segregants did not accumulate during long-term propagation, but several SGI1 variants could be obtained. Most of them appeared to be identical to SGI1-B and SGI1-C, but two new variants caused by deletions via a short-homology-dependent recombination process have also been detected. We have also noticed that the presence of the conjugation helper plasmid increased the formation of these deletion variants considerably.</p> <h3>Conclusions/Significance</h3><p>Despite that excision of SGI1 from the chromosome was proven in SGI1⁺<em>Salmonella</em> populations, its complete loss could not be observed. On the other hand, we demonstrated that several variants, among them two newly identified ones, arose with detectable frequencies in these populations in a short timescale and their formation was promoted by the helper plasmid. This reflects that IncA/C helper plasmids are not only involved in the horizontal spreading of SGI1, but may also contribute to its evolution.</p> </div