90 research outputs found

    High power, high repetition rate laser-based sources for attosecond science

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    Within the last two decades attosecond science has been established as a novel research field providing insights into the ultrafast electron dynamics that follows a photoexcitation or photoionization process. Enabled by technological advances in ultrafast laser amplifiers, attosecond science has been in turn, a powerful engine driving the development of novel sources of intense ultrafast laser pulses. This article focuses on the development of high repetition rate laser-based sources delivering high energy pulses with a duration of only a few optical cycles, for applications in attosecond science. In particular, a high power, high repetition rate optical parametric chirped pulse amplification system is described, which was developed to drive an attosecond pump-probe beamline targeting photoionization experiments with electron-ion coincidence detection at high acquisition rates

    Comparative genomic analysis of the arthropod muscle myosin heavy chain genes allows ancestral gene reconstruction and reveals a new type of 'partially' processed pseudogene

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    <p>Abstract</p> <p>Background</p> <p>Alternative splicing of mutually exclusive exons is an important mechanism for increasing protein diversity in eukaryotes. The insect <it>Mhc </it>(myosin heavy chain) gene produces all different muscle myosins as a result of alternative splicing in contrast to most other organisms of the Metazoa lineage, that have a family of muscle genes with each gene coding for a protein specialized for a functional niche.</p> <p>Results</p> <p>The muscle myosin heavy chain genes of 22 species of the Arthropoda ranging from the waterflea to wasp and <it>Drosophila </it>have been annotated. The analysis of the gene structures allowed the reconstruction of an ancient muscle myosin heavy chain gene and showed that during evolution of the arthropods introns have mainly been lost in these genes although intron gain might have happened in a few cases. Surprisingly, the genome of <it>Aedes aegypti </it>contains another and that of <it>Culex pipiens quinquefasciatus </it>two further muscle myosin heavy chain genes, called <it>Mhc3 </it>and <it>Mhc4</it>, that contain only one variant of the corresponding alternative exons of the <it>Mhc1 </it>gene. <it>Mhc3 </it>transcription in <it>Aedes aegypti </it>is documented by EST data. <it>Mhc3 </it>and <it>Mhc4 </it>inserted in the <it>Aedes </it>and <it>Culex </it>genomes either by gene duplication followed by the loss of all but one variant of the alternative exons, or by incorporation of a transcript of which all other variants have been spliced out retaining the exon-intron structure. The second and more likely possibility represents a new type of a 'partially' processed pseudogene.</p> <p>Conclusion</p> <p>Based on the comparative genomic analysis of the alternatively spliced arthropod muscle myosin heavy chain genes we propose that the splicing process operates sequentially on the transcript. The process consists of the splicing of the mutually exclusive exons until one exon out of the cluster remains while retaining surrounding intronic sequence. In a second step splicing of introns takes place. A related mechanism could be responsible for the splicing of other genes containing mutually exclusive exons.</p

    LISA technology and instrumentation

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    This article reviews the present status of the technology and instrumentation for the joint ESA/NASA gravitational wave detector LISA. It briefly describes the measurement principle and the mission architecture including the resulting sensitivity before focussing on a description of the main payload items, such as the interferomtric measurement system, comprising the optical system with the optical bench and the telescope, the laser system, and the phase measurement system; and the disturbance reduction system with the inertial sensor, the charge control system, and the micropropulsion system. The article touches upon the requirements for the different subsystems that need to be fulfilled to obtain the overall sensitivity.Comment: 37 pages, 18 figures, submitted to CQ

    Antiinflammatory Therapy with Canakinumab for Atherosclerotic Disease

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    Background: Experimental and clinical data suggest that reducing inflammation without affecting lipid levels may reduce the risk of cardiovascular disease. Yet, the inflammatory hypothesis of atherothrombosis has remained unproved. Methods: We conducted a randomized, double-blind trial of canakinumab, a therapeutic monoclonal antibody targeting interleukin-1β, involving 10,061 patients with previous myocardial infarction and a high-sensitivity C-reactive protein level of 2 mg or more per liter. The trial compared three doses of canakinumab (50 mg, 150 mg, and 300 mg, administered subcutaneously every 3 months) with placebo. The primary efficacy end point was nonfatal myocardial infarction, nonfatal stroke, or cardiovascular death. RESULTS: At 48 months, the median reduction from baseline in the high-sensitivity C-reactive protein level was 26 percentage points greater in the group that received the 50-mg dose of canakinumab, 37 percentage points greater in the 150-mg group, and 41 percentage points greater in the 300-mg group than in the placebo group. Canakinumab did not reduce lipid levels from baseline. At a median follow-up of 3.7 years, the incidence rate for the primary end point was 4.50 events per 100 person-years in the placebo group, 4.11 events per 100 person-years in the 50-mg group, 3.86 events per 100 person-years in the 150-mg group, and 3.90 events per 100 person-years in the 300-mg group. The hazard ratios as compared with placebo were as follows: in the 50-mg group, 0.93 (95% confidence interval [CI], 0.80 to 1.07; P = 0.30); in the 150-mg group, 0.85 (95% CI, 0.74 to 0.98; P = 0.021); and in the 300-mg group, 0.86 (95% CI, 0.75 to 0.99; P = 0.031). The 150-mg dose, but not the other doses, met the prespecified multiplicity-adjusted threshold for statistical significance for the primary end point and the secondary end point that additionally included hospitalization for unstable angina that led to urgent revascularization (hazard ratio vs. placebo, 0.83; 95% CI, 0.73 to 0.95; P = 0.005). Canakinumab was associated with a higher incidence of fatal infection than was placebo. There was no significant difference in all-cause mortality (hazard ratio for all canakinumab doses vs. placebo, 0.94; 95% CI, 0.83 to 1.06; P = 0.31). Conclusions: Antiinflammatory therapy targeting the interleukin-1β innate immunity pathway with canakinumab at a dose of 150 mg every 3 months led to a significantly lower rate of recurrent cardiovascular events than placebo, independent of lipid-level lowering. (Funded by Novartis; CANTOS ClinicalTrials.gov number, NCT01327846.

    Composition, diversity and structure of vascular epiphytes in two contrasting Central Amazonian floodplain ecosystems

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    Research focusing on assemblages of vascular epiphytes in the Amazon are scarce. This is especially true for Amazonian floodplain forests, for which only two previous studies have been published. We compared composition, richness and structure of epiphyte assemblages in white-water and black-water floodplains (várzea and igapó) in Central Amazonia in order to close knowledge gaps concerning the distribution and richness of epiphytes. We established sixteen 25x25 m plots in each forest type, and counted and identified all species of vascular epiphytes occurring on trees with a diameter at breast height (DBH) ≥10 cm. We observed a clear distinction in epiphytic species composition (r2=0.83, p=0.001) and diversity (t=3.24, P=0.003) between the two environments, with 61.5 % of species being restricted to várzea, 22.9 % restricted to igapó and only 15.6 % common to both ecosystems. The floodplains were also structurally different for the most abundant species and those with the highest Epiphytic Importance Value (IVe). The diversity of trees did not influence the epiphyte diversity in either ecosystem. The forests were found to differ in the composition, diversity and structure of their epiphytic assemblages, which must be taken into account when designing conservation action plans for these ecosystems and for their vascular epiphytes

    Feeding of Triportheus angulatus (Spix & Agassiz, 1829) in the CamaleĂŁo lake, Manaus, Amazonas state, Brazil

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    Periodical flooding cause strong modifications in Central Amazonian floodplain. Periodical rising and decreasing of the water level influences abiotic and biotic factors of the aquatic environments. During the flooding season, there is a high feed availability, in contrast with dry season in which feed availability is at the lowest level. Limnological parameters also change seasonally. Oxygen concentrations vary both daily and seasonally, sometimes even showing hypoxic conditions. Despite these alterations, floodplain lakes are inhabited by several fish species, having the most diverse and abundant fish fauna among the Amazonian environments. This study focused on Triportheus angulatus feeding in temporal distribution in order to understand the influences of hydrological changes on individual size, diet composition and feeding even in low oxygen concentrations. In rising waters season, small individuals are predominant while the decreasing and the dry seasons there are mostly larger ones. There is a seasonal change on diet composition and this is related to feed type that is more available: during the rising, fishes eat mainly insects and zooplankton; in the flood season and drying season, seeds and fruits are predominant, and at the dry season they eat mainly insects. Feed ingestion was higher in the rising waters and mostly in the flood, and it was lower in the drying season. Feeding activity was not related with oxygen concentrations.As inundações periódicas na Amazônia Central causam profundas modificações no meio ambiente. A alternância dos períodos de cheias e secas tem influência nos fatores bióticos e abióticos do meio aquático. Na enchente e na cheia é alta a oferta de alimentos, ampliando o espectro alimentar que é restrito na seca. As variáveis limnológicas também sofrem modificações. As concentrações de oxigênio têm variações sazonais e diárias, às vezes com períodos de hipoxia. Apesar dessas alterações, os lagos de várzea são habitados por muitas espécies de peixes e estão entre os ambientes de maior abundância e riqueza de peixes na Amazônia. A distribuição temporal e a alimentação de Triportheus angulatus (Spix & Agassiz, 1829) foi estudada em um lago de várzea da Amazônia Central para entender a influência das modificações hídricas sobre o tamanho dos indivíduos, a composição da dieta e a ingestão dos alimentos mesmo em condições de baixas concentrações de oxigênio. Na enchente predominam os indivíduos menores, enquanto que na cheia, vazante e seca os maiores. Houve mudança sazonal na composição da dieta que foi relacionada com a disponibilidade de alimentos no ambientena enchente os peixes ingerem principalmente insetos e zooplâncton; na cheia e vazante frutos e sementes, e na seca insetos. O consumo de alimento foi alto na enchente e cheia, decrescendo na vazante e atingindo as menores quantidades na seca. A atividade alimentar, no período estudado, não foi influenciada pelas baixas concentrações de oxigênio existentes no lago
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