Milk metagenomics and cheese-making properties as affected by indoor farming and summer highland grazing

The study of the complex relationships between milk metagenomics and milk composition and cheese-making efficiency as affected by indoor farming and summer highland grazing was the aim of the present work. The experimental design considered monthly sampling (over 5 mo) of the milk produced by 12 Brown Swiss cows divided into 2 groups: the first remained on a lowland indoor farm from June to October, and the second was moved to highland pastures in July and then returned to the lowland farm in September. The resulting 60 milk samples (2 kg each) were used to analyze milk composition, milk coagulation, curd firming, and syneresis processes, and to make individual model cheeses to measure cheese yields and nutrient recoveries in the cheese. After DNA extraction and Illumina Miseq sequencing, milk microbiota amplicons were also processed by means of an open-source pipeline called Quantitative Insights Into Microbial Ecology (Qiime2, version 2018.2; https://qiime2.org). Out of a total of 44 taxa analyzed, 13 bacterial taxa were considered important for the dairy industry (lactic acid bacteria, LAB, 5 taxa; and spoilage bacteria, 4) and for human (other probiotics, 2) and animal health (pathogenic bacteria, 2). The results revealed the transhumant group of cows transferred to summer highland pastures showed an increase in almost all the LAB taxa, bifidobacteria, and propionibacteria, and a reduction in spoilage taxa. All the metagenomic changes disappeared when the transhumant cows were moved back to the permanent indoor farm. The relationships between 17 microbial traits and 30 compositional and technological milk traits were investigated through analysis of correlation and latent explanatory factor analysis. Eight latent factors were identified, explaining 75.3% of the total variance, 2 of which were mainly based on microbial traits: pro-dairy bacteria (14% of total variance, improving during summer pasturing) and pathogenic bacteria (6.0% of total variance). Some bacterial traits contributed to other compositional-technological latent factors (gelation, udder health, and caseins)

In-depth investigation of the safety of wooden shelves used for traditional cheese ripening

9openInternationalItalian coauthor/editorThe main goal of this research was to characterize the bacterial diversity of the wooden boards used for aging traditional Sicilian cheeses and to evaluate whether pathogenic bacteria are associated with these surfaces. Eighteen cheese dairy factories producing three traditional cheese typologies (PDO Pecorino Siciliano, PDO Piacentinu Ennese, and Caciocavallo Palermitano) were selected within the region of Sicily. The wooden shelf surfaces were sampled by a destructive method to detach wood splinters as well as by a nondestructive brushing to collect microbial cells. Scanning electron microscopy showed the presence of almost continuous bacterial formations on the majority of the shelves analyzed. Yeasts and fungal hyphae were also visualized, indicating the complexity of the plank communities. The amplicon library of the 16S rRNA gene V3-V4 region was paired-end sequenced using the Illumina MiSeq system, allowing the identification of 14 phyla, 32 classes, 52 orders, 93 families, and 137 genera. Staphylococcus equorum was identified from all wooden surfaces, with a maximum abundance of 64.75%. Among cheese-surface-ripening bacteria, Brevibacterium and Corynebacterium were detected in almost all samples. Several halophilic (Halomonas, Tetragenococcus halophilus, Chromohalobacter, Salimicrobium, Marinococcus, Salegentibacter, Haererehalobacter, Marinobacter, and Idiomarinaceae) and moderately halophilic (Salinicoccus, Psychrobacter, and Salinisphaera) bacteria were frequently identified. Lactic acid bacteria (LAB) were present at low percentages in the genera Leuconostoc, Lactococcus, Lactobacillus, Pediococcus, and Streptococcus. The levels of viable microorganisms on the wooden shelves ranged between 2.4 and 7.8 log CFU/cm2. In some cases, LAB were counted at very high levels (8.2 log CFU/cm2). Members of the Enterobacteriaceae family were detected in a viable state for only six samples. Coagulase-positive staphylococci, Salmonella spp., and Listeria monocytogenes were not detected. Seventy-five strains belonged to the genera Leuconostoc, Lactococcus, Pediococcus, Enterococcus, Lactobacillus, and Weissella.openSettanni, Luca; Busetta, Gabriele; Puccio, Valeria; Licitra, Giuseppe; Franciosi, Elena; Botta, Luigi; Di Gerlando, Rosalia; Todaro, Massimo; Gaglio, RaimondoSettanni, L.; Busetta, G.; Puccio, V.; Licitra, G.; Franciosi, E.; Botta, L.; Di Gerlando, R.; Todaro, M.; Gaglio, R

Polyphasic characterization of microbiota of “Mastredda”, a traditional wooden tool used during the production of PDO Provola dei Nebrodi cheese

11openInternationalItalian coauthor/editorThe biofilms of the wooden tables used for the acidification of the curd were investigated for PDO Provola dei Nebrodi cheese, a traditional stretched cheese made in eastern Sicily (southern Italy) from raw cows’ milk. To this purpose the wooden tables of four dairy facilities were analysed for their microbiota by scanning electron microscopy (SEM) analysis and a combined culture-independent and -dependent microbiological approach. SEM inspection showed an almost continuous biofilm formation. MiSeq Illumina analysis identified 8 phyla, 16 classes, 25 orders, 47 families and 50 genera. Corynebacterium, Bifidobacterium and lactic acid bacteria (LAB) were detected in all samples. In particular, the LAB genera detected on all wooden tables were Lactobacillus, Streptococcus and Lactococcus. LAB dominated the surfaces of all wooden tables with levels higher than 7.0 Log CFU/cm2. In particular, the LAB found at the highest levels were mesophilic cocci. Coagulase positive staphylococci, Salmonella spp., Listeria monocytogenes and Shiga-toxigenic Escherichia coli were never detected. Twenty-seven dominating LAB strains were identified within the genera Enterococcus, Lactobacillus, Lacticaseibacillus, Lactiplantibacillus, Levilactobacillus, Lactococcus, Leuconostoc, Pediococcus and Streptococcus. This work showed that the wooden table used during the production of PDO Provola dei Nebrodi cheese is a safe system and a microbiologically active toolopenBusetta, Gabriele; Garofalo, Giuliana; Mangione, Guido; Botta, Luigi; Franciosi, Elena; Di Gerlando, Rosalia; Todaro, Massimo; Licitra, Giuseppe; Scatassa, Maria Luisa; Gaglio, Raimondo; Settanni, LucaBusetta, G.; Garofalo, G.; Mangione, G.; Botta, L.; Franciosi, E.; Di Gerlando, R.; Todaro, M.; Licitra, G.; Scatassa, M.L.; Gaglio, R.; Settanni, L

Biotic, mineralogical, petrographic, and geomorphological characterization of the Falerno-Domitio shoreline (Campania region, southern Italy), with implication for environmental health studies: preliminary results

We report the first results of an ongoing study related to the project FARO (i.e. the Italian “Fund for original research projects”, granted by the Università di Napoli Federico II and IMI bank partner). This research project aims to the enhancement of the physical and biotic features of the coastal landscape related to the Falerno-Domitio shoreline, located in the mid-north coast of the Campania region (southern Italy), from the Garigliano river and Torregaveta. In the national scenario, this area can be considered as a valuable “natural laboratory”, for its wildlife (i.e. the Natural Reserve Foce Volturno, the Regional Park of Campi Flegrei, etc.), famous archaeological sites (i.e. Cuma excavations), and peculiar geological and volcanological characteristics (i.e. Phlegraean Fields). Unfortunately, it also suffers for a strong pollution and environmental degradation due to human activities. The research consists of a multidisciplinary analysis, mainly based on a bathymetric sensing, sampling of both the sea bottom sediments and the beach sands; it comprises: 1) integrated monitoring of the quality of environmental health through a biological study, 2) geomorphological and sedimentological analyses of the area and of the whole sample sets, with GIS data processing, 3) taxonomic and ecological analyses of selected benthic meiofauna assemblages, 4) mineralogy, petrography and geochemistry of beach sands along the shoreline, as well as of sea bottom samples. A complete sampling work of the beach sands, from the Garigliano estuary to the Cuma site, has been done, and the results of mineralogical, petrographic and chemical features, mainly in relation to major and trace elements data, as well as the granulometric curves, are presented. The ecologic and eco-toxicological studies are also carried out on selected samples, revealing the structure of meiofauna (benthic foraminifers and ostracods) assemblages. Tests on the occurrence of the bio-indicator organism Artemia salina have also performed, showing a relatively low toxicity of the samples analysed up to now. Preliminary bathymetric data are also presented

Position Paper of the Italian Association of Medical Oncology on Early Palliative Care in Oncology Practice (Simultaneous Care)

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Origin and evolution of Cenozoic magmatism of Sardinia (Italy). A combined isotopic (Sr-Nd-Pb-O-Hf-Os) and petrological view

The Cenozoic igneous activity of Sardinia is essentially concentrated in the 38-0.1 Myr time range. On the basis of volcanological, petrographic, mineralogical, geochemical and isotopic considerations, two main rock types can be defined. The first group, here defined SR (Subduction-Related) comprises Late Eocene-Middle Miocene (~ 38-15 Ma) igneous rocks, essentially developed along the Sardinian Trough, a N-S oriented graben developed during the Late Oligocene-Middle Miocene. The climax of magmatism is recorded during the Early Miocene (~ 23-18 Ma) with minor activity before and after this time range. Major and trace element indicators, as well as Sr-Nd-Pb-Hf-Os-O isotope systematic indicate complex petrogenetic processes including subduction-related metasomatism, variable degrees of crustal contamination at shallow depths, fractional crystallization and basic rock partial melting. Hybridization processes between mantle and crustal melts and between pure mantle and crustally contaminated mantle melts increased the isotopic and elemental variability of the composition of the evolved (intermediate to acid) melts. The earliest igneous activity, pre-dating the Early Miocene magmatic climax, is related to the pushing effects exerted by the Alpine Tethys over the Hercynian or older lower crust, rather than to dehydration processes of the oceanic plate itself. The second group comprises volcanic rocks emplaced from ~ 12 to ~ 0.1 Ma. The major and, partially, trace element content of these rocks roughly resemble magmas emplaced in within-plate tectonic settings. From a Sr-Nd-Pb-Hf-Os isotopic point of view, it is possible to subdivide these rocks in two subgroups. The first, defined RPV (Radiogenic Pb Volcanic) group comprises the oldest and very rare products (~ 12-4.4 Ma) occurring only in the southern sectors of Sardinia. The second group, defined UPV (Unradiogenic Pb Volcanic), comprises rocks emplaced in the remaining central and northern sectors during the ~ 4.8-0.1 Ma time range. The origin of the RPV rocks remains quite enigmatic, since they formed just a few Myr after the end of a subduction-related igneous activity but do not show any evidence of slab-derived metasomatic effects. In contrast, the complex origin of the mafic UPV rocks, characterized by low 206Pb/204Pb (17.4-18.1), low 143Nd/144Nd (0.51232-0.51264), low 176Hf/177Hf (0.28258-0.28280), mildly radiogenic 87Sr/86Sr (~ 0.7044) and radiogenic 187Os/188Os ratios (0.125-0.160) can be explained with a mantle source modified after interaction with ancient delaminated lower crustal lithologies. The strong isotopic difference between the RPV and UPV magmas and the absence of lower crustal-related features in the SR and RPV remain aspects to be solved

Luigi Settembrini. Periodico letterario educativo mensile. A. 2, n.1(1892)-A. 3, n.10(1894)

A.2, n.1(nov.1892): G. Olivieri, Ad Antonio Bartolini, P. 1-2 ; G. Olivieri, Prospero Viani, P. 2-11; R. Sabbatini, Ancora Quom o Quum?, P. 11-2 ; Pensieri del Settembrini, P. 12-3 ; E. Perito, Ad nubem, P. 13; F. Lagrance, Dell’educazione fisica, p. 14-15 ; Cronaca dell’Istituto L. Settembrini, P. 15-6.A. 2, n. 2(dic. 1892): G. Lanzalone, La morale nell’arte, P. 17-23 ; B. ( dal Bibliografo), Per i libri di testo nelle scuole elementari, P. 23-5 ; V. Notari, In Gutembergium artis typograficae inventorem, P. 25; Progressi della navigazione aerea, P. 26-8 ; Pensieri del Settembrini, P. 28-9 ; Il nostro concorso, P. 29 ; G. Lanzalone, La prima pioggia d’autunno, P. 30-1A. 2, n.3(gen. 1893): Bonghi, Una lettera del Bonghi, P. 33-4 ; G. Lanzalone, Ancora della morale nell’arte, P. 34-8 ; Pensieri del Settembrini, P. 38-9 ; C. Arlìa, Buon dì e tre anguille, P. 39-41 ; G. Lanzalone , All’amico G. Olivieri , P. 42-3 ; P. Lioy, Bagni e villeggiature, P. 43-5.A. 2, n. 4(feb. 1893): C. A. Alemagna, Per la morale nell’arte, P. 49-55.A. 2, n. 5(mar. 1893): R. Sabbatini, L’epistola di Saffo a Faone, P. 65-6 ; G. Lanzalone, Il drammaturgo(caricatura), P. 66-7 ; G. Lanzalone, Ancora per la morale dell’arte, P. 67-70 ; F. De Falco, Un’altra lettera!, P. 71-2 ; Il Settembrini, Per una petizione al Parlamento, P. 72; E. Perito, A mia sorella morta, P. 73-4.A. 2, n.6(apr. 1893): Il Settembrini, Petizione al Parlamento, P. 81-3 ; C. Arlia, Noterelle filologiche, P. 84-5 ; G. Bigoni, Ricordi Picentini (2 sonetti), P. 85 ; C. A. Alemagna, Lettera con annotazioni, P. 86-90 ; V. Caputo, Il giuramento, P. 90-1 ; A. Buscaino Campo, Il piè fermo di Dante, P. 92-3.A.2, n.7(apr. 1893): G. Lanzalone, Professori e maestri, P. 97-9 ; il Settembrini, Petizione al Parlamento, P. 100-2 ; Lista delle adesioni, P. 102-4 ; Guido Bigoni, Domenica Rusticana, P. 105 ; Pensieri del Settembrini, P. 105-7 ; Dal Gazzettino d’oro, Utili varietà, P. 107-8 ; G. Lanzalone, Al maggiore Vincenzo Notari, P. 108 ; V. Notarius, Risposta, P. 109 ; F. Accinelli, La poesia della vita, P. 109-10.A. 2, n.8(giu. 1893): C. Arlìa, Noterelle filologiche, P. 113-16 ; Guido Bigoni, La quercia del Tasso, P. 116 ; G. Lanzalone, La ginnastica con la neve, P. 116-17 ; Luigi Settembrini, Una lettera inedita di L. Settembrini, P. 118-19 ; V. Notaro, In Ariostum, P. 119 ; L’arte di respirare, P. 120-21 ; F. De Falco, Il suicidio e la religione, P. 122-24.A.2, n.9/10(lug.-ago. 1893): R. Mariano, Ad un banchetto nunziale, P. 129-132 ; G. Lanzalone, A Cristoforo Colombo, P. 132-34 ; C. Arlìa, Note filologiche, P. 135-36 ; G. Olivieri, Il terzo libro della vita di G. Cristo, P. 136-39 ; F. Persico, La pace, P. 140-41 ; L. A. Villari, Cesare Dalbono, P. 141-45.A.2, n.11/12(sett.-ott. 1893): Luigi Settembrini, Una lettera inedita di L. Settembrini, P. 153-54 ; A. De Leo, Vite di illustri salernitani, P. 154-62 ; G. Franciosi, I sogni, P. 162-63 ; A. Frabasile, Bozzetti ellenici, P. 164-70 ; L. A. Villari , Errori Giudiziari, P. 171-75 ; G. Lanzalone, Verismo, P. 175-76.A.3,n.1/2 (nov.-dic. 1893): M. Giordano, La pubblica educazione e l’ateismo, P. 1-4 ; il Settembrini, Concorso, P. 4 ; Per una forca conservata in un museo, P. 5 ; G. Lanzalone, L’Ora presente, P. 5 ; C. Mariano Pilar, Silvio Spaventa, P. 6-19 ; C. Arlìa, Note filologiche, P. 20-1 ; G. Grammatica, Ideale, P. 22 ; G. Olivieri, Funesta rimembranza, P. 31-2 ; G. Olivieri, La notte della vigilia del Natale, P. 32.A.3, n.3/4(gen.-feb. 1894): G. Lanzalone, E la nostra petizione?, P. 33-5 ; Dall’albo di Luigi Antonio Villari, P. 36 ; G. Olivieri, Una visita inaspettata, P. 37-46 ; A. Frabasile, Alla signora G. P., P. 47 ; M. Giordano, Il Governo, i Municipi e l’istruzione religiosa, P. 48-53 ; G. Lanzalone, Esercizi militari, P. 53 ; C. Arlìa, Note filologiche, P. 54 ; G. Lanzalone, Un dubbio proposto al prof. Sabbadini, P. 54-5 ; G. L., Risultato del passato concorso e concorso nuovo, P. 55-6 ; R. Galdi, Epistola di Catullo ad Ortalo, P. 57.A.3, n.5/6(mar-apr 1894): G. Lanzalone, Dell’educazione nelle scuole classiche, P. 65-70 ; G. L., Un epigramma di Leone XIII, P. 70-1 ; V. Caputo, Vita di borso, P. 72-6 ; C. Arlìa, Note filologiche, P. 76-7 ; G. Lanzalone, Amore, P. 78 ; Aniello Gaeta, Dulcissime Rerum, P. 79-81 ; Francesco De Falco, La duchessa Ravaschieri e il dormitorio, P. 81-2 ; Carmine Zottoli, Risultato del passato concorso e concorso nuovo, P. 82-6.A.3, n. 7/8(mag. – giu 1894): C. Arlìa, Note filologiche, P. 97-8 ; G. Lanzalone, Per il 1°Maggio, P. 98-101 ; M. Giordano, La libertà d’insegnamento e di coscienza, P. 101-10 ; L. A. Villari, Il capitano Tim- Tim, P. 111- 15 ; C. A. Alemagna, L’opera recente di Herbert Spencer, P. 115-16 ; Nicc. Castagna, Sospiro, P. 116 ; G. Cuomo, Sovra un passo del carme “I Sepolcri”, P. 117-20.A.3, n.9(lug. 1894): Concorso nuovo, P. 125 ; C. Arlìa, Note filologiche, P. 126-27 ; Il manicomio dei genii, P. 127 ; G. Lanzalone, Elena, P. 128 ; Giovanni Cuomo, Nunzio del giorno, P. 128-29 ; Giovanni Manfredi, Ofelia, P. 129 ; G. Lanzalone, Da Anacreonte, P. 139.A.3, n.10(ago. 1894): R. Sabbadini, L’anno della nascita di Gasparino Barziza, P. 141-42 ; G. Lanzalone, Il Discredito dei versi, P. 142-46 ; C. Arlìa, Note filologiche, P. 147-48 ; E. Perito, L’ultima rosa d’estate, P. 148 ; D’Aloja, L’arte e la critica, P. 149-51 ; Epigrammi, P. 151-52

Mouse models of neurodegenerative disease: preclinical imaging and neurovascular component.

Neurodegenerative diseases represent great challenges for basic science and clinical medicine because of their prevalence, pathologies, lack of mechanism-based treatments, and impacts on individuals. Translational research might contribute to the study of neurodegenerative diseases. The mouse has become a key model for studying disease mechanisms that might recapitulate in part some aspects of the corresponding human diseases. Neurode- generative disorders are very complicated and multifacto- rial. This has to be taken in account when testing drugs. Most of the drugs screening in mice are very di cult to be interpretated and often useless. Mouse models could be condiderated a ‘pathway models’, rather than as models for the whole complicated construct that makes a human disease. Non-invasive in vivo imaging in mice has gained increasing interest in preclinical research in the last years thanks to the availability of high-resolution single-photon emission computed tomography (SPECT), positron emission tomography (PET), high eld Magnetic resonance, Optical Imaging scanners and of highly speci c contrast agents. Behavioral test are useful tool to characterize di erent ani- mal models of neurodegenerative pathology. Furthermore, many authors have observed vascular pathological features associated to the di erent neurodegenerative disorders. Aim of this review is to focus on the di erent existing animal models of neurodegenerative disorders, describe behavioral tests and preclinical imaging techniques used for diagnose and describe the vascular pathological features associated to these diseases

Petrogenesi dei complessi gabbro-tonalitici tardo-ercinici del Sarrabus meridionale (Sardegna orientale)

Dottorato di ricerca in petrologia delle associazioni magmatiche. 10. ciclo. Coordinatore Renato Cristofolini. Tutore Piero BrotzuConsiglio Nazionale delle Ricerche - Biblioteca Centrale - P.le Aldo Moro, 7 , Rome; Biblioteca Nazionale Centrale - P.za Cavalleggeri, 1, Florence / CNR - Consiglio Nazionale delle RichercheSIGLEITItal

Development of a web-based clinical trial protocol authoring system

A clinical trial is a planned, controlled and ethical experiment to evaluate the safety and effectiveness of a medical treatment in a patient population. Fundamental to a properly planned clinical trial is the protocol, which serves as a plan or set of instructions for trial conduct. Audits of past trials revealed that clinical trial protocols were either lacking sufficient detail, or non-existent. Reasons for these deficiencies include: a shortage of skilled clinical trialists, limited time and budgets to conduct proper planning of clinical trials, and negligible funding and logistical support for new trialists. Therefore, the purpose of this dissertation is to develop a new method that can improve the authoring of clinical trial protocols. After an extensive review of the medical literature, a web-based clinical trial Protocol Authoring System (PAS) was designed, developed and evaluated. PAS is a computer program that directs novices through the development of a protocol for a randomised controlled trial (RCT) done according to highest standards, or Good Clinical Practices (GCPs). The first component of this system is the protocol generating module (PGM), which prompts users on the necessary details for conducting the clinical trial. It has an online knowledge-base that contains expert advice in the form of Help files, hyperlinks, static decision trees, and literature references. The system runs on a Linux operating system with an Apache web server, Oracle database, and an HTML-Java web interface. A 20-page draft protocol is produced that contains a scientific question, experimental design, statistics, ethical considerations and standard operating procedures. To determine the effectiveness of PGM as a protocol generator, fifty subjects were randomised to either the module or a standard textbook on the fundamentals of clinical trials. According to expert ranking of protocols, subjects using the PGM module produced protocols that were significantly better than those generated with the textbook (P<0.01). However, many PGM protocols were still lacking important design and statistical details. Because of these deficiencies, the second component of the system - an advisory module - was constructed. This module guides novices through the selection of appropriate design and statistics for their clinical trial. To develop this module, a clinical trial expert was first interviewed to acquire design and statistical knowledge in algorithmic form. One path of the expert algorithm was then encoded using a webbased expert authoring tool. Once the advisory module was completed, it was evaluated together with PGM as the complete PAS prototype in a small group of subjects. Preliminary results suggest a significant improvement in design and statistical detail of PAS protocols as compared to textbook protocols. PAS has been formulated, developed and evaluated in a manner that makes it significantly different from other computer tools used for clinical trial planning. The findings of this dissertation demonstrate that PAS significantly improves the ability of novices to produce clinical trial protocols that meet GCP requirements.Medicine, Faculty ofAnesthesiology, Pharmacology and Therapeutics, Department ofGraduat