Bud burst and flowering phenology in a mixed oak forest from Eastern Romania

Bud burst and flowering phenology have been observed in year 2008 ina natural white oak species complex situated in eastern Romania. A total of 300 mature individuals was mapped and identified based on leaf morphology. The community consists of four oak species: Quercus pedunculiflora, Q. robur, Q. pubescens and Q. petraea. A set of 28 individuals could not be unambiguously classified to one or another species. Data on bud burst showed a normal distribution and the differences among species were small. The "very late" flushing was recorded on 15th of April, three weeks later when compared to early flushing individuals. The time period between the bud burst and the complete development of leaves was nearly the same in all oak species, varying on average, between 18.4 and 20.6 days. The spatialdistribution of phenological groups within the complex appears to be non-randomly, because in many parts of the study plot exist groups in which most of the trees belong to the same phenological category. Our results indicate an overlap in flowering time for all oak species which occur in the area. The data support the hypothesis that interspecific gene flow is possible between closely related oak species

Waves and Oscillations in Model Neuronal Networks

In this thesis methods from nonlinear dynamical systems, pattern formation and bifurcation theory, combined with numerical simulations, are applied to three models in neuroscience. In Chapter 1 we analyze the Wilson-Cowan equations for a single self-excited population of cells with absolute refractory period. We construct the normal form for a Hopf bifurcation, and prove that by increasing the refractory period the network switches from a steady state to an oscillatory behavior. Numerical simulations indicate that for large values of refractoriness the oscillation converges to a relaxation-like pattern, the period of which we estimate. Chapter 2 brings new results for the rate model introduced by Hansel and Sompolinsky who study feature selectivity in local cortical circuits. We study their model with a more general, nonlinear sigmoid gain function, and prove that the system can exhibit different kind of patterns such as stationary states, traveling waves and standing waves. Standing waves can be obtained only if the threshold is sufficiently high and only for intermediate values of the strength of adaptation. A large adaptation strength destabilizes the pattern. Therefore the localized activity starts to propagate along the network, resulting in a traveling wave. We construct the normal form for Hopf and Takens-Bogdanov with O(2)-symmetry bifurcations and study the interactions between spatial and spatio-temporal patterns in the neural network. Numerical simulations are provided.Chapter 3 addresses several questions with regard to the traveling wave propagation in a leaky-integrate-and-fire model for a network with purely excitatory (exponentially decaying) synaptic coupling. We analyze the case when the neurons fire multiple spikes and derive a formula for the voltage. We compute in a certain parameter space, the curves that delineate the region where single-spike traveling wave solutions exist, and show that there is a region of parameter space where neurons can propagate a two-spike traveling wave

Evidence for hybridization and introgression within a species-rich oak (Quercus spp.) community

<p>Abstract</p> <p>Background</p> <p>Analysis of interspecific gene flow is crucial for the understanding of speciation processes and maintenance of species integrity. Oaks (genus <it>Quercus</it>, <it>Fagaceae</it>) are among the model species for the study of hybridization. Natural co-occurrence of four closely related oak species is a very rare case in the temperate forests of Europe. We used both morphological characters and genetic markers to characterize hybridization in a natural community situated in west-central Romania and which consists of <it>Quercus robur</it>, <it>Q. petraea</it>, <it>Q. pubescen</it>s, and <it>Q. frainetto</it>, respectively.</p> <p>Results</p> <p>On the basis of pubescence and leaf morphological characters ~94% of the sampled individuals were assigned to pure species. Only 16 (~6%) individual trees exhibited intermediate morphologies or a combination of characters of different species. Four chloroplast DNA haplotypes were identified in the study area. The distribution of haplotypes within the white oak complex showed substantial differences among species. However, the most common haplotypes were present in all four species. Furthermore, based on a set of 7 isozyme and 6 microsatellite markers and using a Bayesian admixture analysis without any a priori information on morphology we found that four genetic clusters best fit the data. There was a very good correspondence of each species with one of the inferred genetic clusters. The estimated introgression level varied markedly between pairs of species ranging from 1.7% between <it>Q. robur </it>and <it>Q. frainetto </it>to 16.2% between <it>Q. pubescens </it>and <it>Q. frainetto</it>. Only nine individuals (3.4%) appeared to be first-generation hybrids.</p> <p>Conclusion</p> <p>Our data indicate that natural hybridization has occurred at relatively low rates. The different levels of gene flow among species might be explained by differences in flowering time and spatial position within the stand. In addition, a partial congruence between phenotypically and genetically intermediate individuals was found, suggesting that intermediate appearance does not necessarily mean hybridization. However, it appears that natural hybridization did not seriously affect the species identity in this area of sympatry.</p

Marginal/peripheral populations of forest tree species and their conservation status: report for southeastern Europe

The Southeastern Europe, which is usually known as Balkan Peninsula, harbours a vast number of plant species among which a great number of relict and endemic ones. This region was one of the main areas in Europe where plant species found shelter in refugia and survived during the last glaciation. These refugia were the source areas for the postglacial colonization of many forest tree species. Human impact has been reported in the region since antiquity resulting in fragmentation of forests and deforestation. Marginal/peripheral (MaP) populations could be identified for most of the forest tree species occurring in the region. However, detailed information about MaP populations is restricted to few cases. Most of the MaP populations identified by FP1202 experts are not located in protected areas. Thus, approximately 27 % of the MaP populations are included in Natura 2000 sites, and only one out of the four reported populations is included in a genetic conservation unit. Many MaP populations (40%) are registered as seed stands and only 14% are included in EUFGIS database. Conservation of forest genetic resources, including MaP populations, is a component of sustainable management of forests in many countries of the region

Patterns of contemporary hybridization inferred from paternity analysis in a four-oak-species forest

<p>Abstract</p> <p>Background</p> <p>Few studies address the issue of hybridization in a more than two-species context. The species-rich <it>Quercus </it>complex is one of the systems which can offer such an opportunity. To investigate the contemporary pattern of hybridization we sampled and genotyped 320 offspring from a natural mixed forest comprising four species of the European white oak complex: <it>Quercus robur</it>, <it>Q. petraea</it>, <it>Q. pubescens</it>, and <it>Q. frainetto</it>.</p> <p>Results</p> <p>A total of 165 offspring were assigned unambiguously to one of the pollen donors within the study plot. The minimum amount of effective pollen originating from outside the plot varied markedly among the seed parents, ranging from 0.18 to 0.87. The majority of the successful matings (64.1%) occurred between conspecific individuals indicating the existence of reproductive barriers between oak species. However, the isolation was not complete since we found strong evidence for both first-generation (8.4%) and later-generation hybrids (27.5%). Only two out of eight seed parents, belonging to <it>Q. petraea </it>and <it>Q. robur</it>, showed a high propensity to hybridize with <it>Q. pubescens </it>and <it>Q. petraea</it>, respectively. Significant structure of the effective pollen pools (<it>Φ</it>_{<it>pt </it>}= 0.069, P = 0.01) was detected in our sample. However, no support was found for the isolation by distance hypothesis. The proportion of hybrids was much higher (79%) in the seed generation when compared to the adult tree generation.</p> <p>Conclusion</p> <p>First-generation hybrids were observed only between three out of six possible species combinations. Hybrids between one pair of species preferred to mate with one of their parental species. The observation of first and later-generation hybrids in higher frequency in acorns than in adults might be explained by selection against hybrid genotypes, the history of this uneven-aged forest or past introgression between species.</p

Model-based functional neuroimaging using dynamic neural fields: An integrative cognitive neuroscience approach

A fundamental challenge in cognitive neuroscience is to develop theoretical frameworks that effectively span the gap between brain and behavior, between neuroscience and psychology. Here, we attempt to bridge this divide by formalizing an integrative cognitive neuroscience approach using dynamic field theory (DFT). We begin by providing an overview of how DFT seeks to understand the neural population dynamics that underlie cognitive processes through previous applications and comparisons to other modeling approaches. We then use previously published behavioral and neural data from a response selection Go/Nogo task as a case study for model simulations. Results from this study served as the ‘standard’ for comparisons with a model-based fMRI approach using dynamic neural fields (DNF). The tutorial explains the rationale and hypotheses involved in the process of creating the DNF architecture and fitting model parameters. Two DNF models, with similar structure and parameter sets, are then compared. Both models effectively simulated reaction times from the task as we varied the number of stimulus–response mappings and the proportion of Go trials. Next, we directly simulated hemodynamic predictions from the neural activation patterns from each model. These predictions were tested using general linear models (GLMs). Results showed that the DNF model that was created by tuning parameters to capture simultaneously trends in neural activation and behavioral data quantitatively outperformed a Standard GLM analysis of the same dataset. Further, by using the GLM results to assign functional roles to particular clusters in the brain, we illustrate how DNF models shed new light on the neural populations’ dynamics within particular brain regions. Thus, the present study illustrates how an interactive cognitive neuroscience model can be used in practice to bridge the gap between brain and behavior

Genetic evidence of human mediated, historical seed transfer from the Tyrolean Alps to the Romanian Carpathians in Larix decidua (Mill.) forests

International audienceKey messageHistoric transfer of larch from Alpine sources to Southern and Eastern Carpathians has been verified by means of nuclear genetic markers. Tyrolean populations can be differentiated into a north-western and south-eastern group, while Romanian populations are separated according to the Southern and Eastern Carpathians. Low-level introgression from Alpine sources is found in autochthonous Carpathian populations.ContextLarge scale human mediated transfer of forest reproductive material may have strongly modified the gene pool of European forests. Particularly in European larch, large quantities of seeds from Central Europe were used for plantations in Southern and Eastern Europe starting in the mid nineteenth century.AimsOur main objective was to provide DNA marker based evidence for the anthropogenic transfer of Alpine larch reproductive material to native Carpathian populations.MethodsWe studied and compared 12 populations (N = 771) of Larix decidua in the Alps (Austria, Italy) and in the Southern and Eastern Carpathians (Romania) using 13 microsatellites.ResultsHigh genetic diversity (He = 0.752; RS = 9.4) and a moderate genetic differentiation (FST = 0.13; G′ST = 0.28) among populations were found; Alpine and Carpathian populations were clearly separated by clustering methods. A Tyrolean origin of plant material was evident for one out of four adult Romanian populations. In the transferred population, a genetic influence from Carpathian sources was found neither in adults nor in juveniles, while the natural regeneration of two Romanian populations was genetically affected by Alpine sources to a minor degree (2.2 and 2.9% allochthonous individuals according to GeneClass and Structure, respectively). ConclusionTracing back of plant transfer by means of genetic tools is straightforward, and we propose further studies to investigate gene flow between natural and transferred populations

The Dynamics and Variability of Radial Growth in Provenance Trials of Norway Spruce (Picea abies (L.) Karst.) Within and Beyond the Hot Margins of its Natural Range

Multi-site field trials provide valuable data for the investigation of possible effects of environmental changes on forest tree species. We analyze the descendants of plus trees from 33 Norway spruce seed sources of Romanian Carpathians, at age 30, in four comparative field trials: two established in the natural range of species and two outside of it. The dynamics and variation of radial growth, earlywood and latewood were analyzed. The influence of populations, site conditions and climatic factors were also quantified. The provenances response in the four comparative trials was asymmetric for mean radial growth, but its dynamics was less favourable outside of the natural range. Analysis of variance showed significant differences (P&lt;0.001) between the testing sites, but non-significant (P&lt;0.05) for the populations. Populations x localities interaction was high (P&lt;0.001) in the first half of the testing period, but decreased over time, becoming not significant at the age of 30. At intra-populational level, the average coefficient of variation for radial growth was higher outside the natural range, whereas the proportion of latewood decreased. The temperature in the first half of the growing season negatively influenced (P&lt;0.001) the radial increment, but in the latewood proportion significat effects (PË‚0.05) were recorded only in trials located outside of the natural range. An increased variability of radial growth and a decrease of latewood proportion are expected in Norway spruce stands located at lower altitudes, towards the limits of the natural range. Our results may contribute to the sustainable management of Norway spruce forests within and outside its natural range

Bifurcation study of a neural field competition model with an application to perceptual switching in motion integration.

Perceptual multistability is a phenomenon in which alternate interpretations of a fixed stimulus are perceived intermittently. Although correlates between activity in specific cortical areas and perception have been found, the complex patterns of activity and the underlying mechanisms that gate multistable perception are little understood. Here, we present a neural field competition model in which competing states are represented in a continuous feature space. Bifurcation analysis is used to describe the different types of complex spatio-temporal dynamics produced by the model in terms of several parameters and for different inputs. The dynamics of the model was then compared to human perception investigated psychophysically during long presentations of an ambiguous, multistable motion pattern known as the barberpole illusion. In order to do this, the model is operated in a parameter range where known physiological response properties are reproduced whilst also working close to bifurcation. The model accounts for characteristic behaviour from the psychophysical experiments in terms of the type of switching observed and changes in the rate of switching with respect to contrast. In this way, the modelling study sheds light on the underlying mechanisms that drive perceptual switching in different contrast regimes. The general approach presented is applicable to a broad range of perceptual competition problems in which spatial interactions play a role