Sensing the ocean biological carbon pump from space: A review of capabilities, concepts, research gaps and future developments

The element carbon plays a central role in climate and life on Earth. It is capable of moving among the geosphere, cryosphere, atmosphere, biosphere and hydrosphere. This flow of carbon is referred to as the Earth’s carbon cycle. It is also intimately linked to the cycling of other elements and compounds. The ocean plays a fundamental role in Earth’s carbon cycle, helping to regulate atmospheric CO2 concentration. The ocean biological carbon pump (OBCP), defined as a set of processes that transfer organic carbon from the surface to the deep ocean, is at the heart of the ocean carbon cycle. Monitoring the OBCP is critical to understanding how the Earth’s carbon cycle is changing. At present, satellite remote sensing is the only tool available for viewing the entire surface ocean at high temporal and spatial scales. In this paper, we review methods for monitoring the OBCP with a focus on satellites. We begin by providing an overview of the OBCP, defining and describing the pools of carbon in the ocean, and the processes controlling fluxes of carbon between the pools, from the surface to the deep ocean, and among ocean, land and atmosphere. We then examine how field measurements, from ship and autonomous platforms, complement satellite observations, provide validation points for satellite products and lead to a more complete view of the OBCP than would be possible from satellite observations alone. A thorough analysis is then provided on methods used for monitoring the OBCP from satellite platforms, covering current capabilities, concepts and gaps, and the requirement for uncertainties in satellite products. We finish by discussing the potential for producing a satellite-based carbon budget for the oceans, the advantages of integrating satellite-based observations with ecosystem models and field measurements, and future opportunities in space, all with a view towards bringing satellite observations into the limelight of ocean carbon research

The increasing importance of satellite observations to assess the ocean carbon sink and ocean acidification

This is the author accepted manuscript. The final version is available on open access from Elsevier via the DOI in this recordData availability Data will be made available on request.The strong control that the emissions of carbon dioxide (CO2) have over Earth's climate identifies the need for accurate quantification of the emitted CO2 and its redistribution within the Earth system. The ocean annually absorbs more than a quarter of all CO2 emissions and this absorption is fundamentally altering the ocean chemistry. The ocean thus provides a fundamental component and powerful constraint within global carbon assessments used to guide policy action for reducing emissions. These carbon assessments rely heavily on satellite observations, but their inclusion is often invisible or opaque to policy. One reason is that satellite observations are rarely used exclusively, but often in conjunction with other types of observations, thereby complementing and expanding their usability yet losing their visibility. This exploitation of satellite observations led by the satellite and ocean carbon scientific communities is based on exciting developments in satellite science that have broadened the suite of environmental data that can now reliably be observed from space. However, the full potential of satellite observations to expand the scientific knowledge on critical processes such as the atmosphere-ocean exchange of CO2 and ocean acidification, including its impact on ocean health, remains largely unexplored. There is clear potential to begin using these observation-based approaches for directly guiding ocean management and conservation decisions, in particular in regions where in situ data collection is more difficult, and interest in them is growing within the environmental policy communities. We review these developments, identify new opportunities and scientific priorities, and identify that the formation of an international advisory group could accelerate policy relevant advancements within both the ocean carbon and satellite communities. Some barriers to understanding exist but these should not stop the exploitation and the full visibility of satellite observations to policy makers and users, so these observations can fulfil their full potential and recognition for supporting society.European Space Agenc

Phytoplankton across Tropical and Subtropical Regions of the Atlantic, Indian and Pacific Oceans

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Seafarer citizen scientist ocean transparency data as a resource for phytoplankton and climate research

The oceans' phytoplankton that underpin the marine food chain appear to be changing in abundance due to global climate change. Here, we compare the first four years of data from a citizen science ocean transparency study, conducted by seafarers using home-made Secchi Disks and a free Smartphone application called Secchi, with contemporaneous satellite ocean colour measurements. Our results show seafarers collect useful Secchi Disk measurements of ocean transparency that could help future assessments of climate-induced changes in the phytoplankton when used to extend historical Secchi Disk data

Microbiome to Brain:Unravelling the Multidirectional Axes of Communication

The gut microbiome plays a crucial role in host physiology. Disruption of its community structure and function can have wide-ranging effects making it critical to understand exactly how the interactive dialogue between the host and its microbiota is regulated to maintain homeostasis. An array of multidirectional signalling molecules is clearly involved in the host-microbiome communication. This interactive signalling not only impacts the gastrointestinal tract, where the majority of microbiota resides, but also extends to affect other host systems including the brain and liver as well as the microbiome itself. Understanding the mechanistic principles of this inter-kingdom signalling is fundamental to unravelling how our supraorganism function to maintain wellbeing, subsequently opening up new avenues for microbiome manipulation to favour desirable mental health outcome

Climate variability drives plankton community composition changes: The 2010-2011 El Niño to la Niña transition around Australia

© 2015 The Author. The strong La Niña of 2010-2011 provided an opportunity to investigate the ecological impacts of El Niño-Southern Oscillation on coastal plankton communities using the nine national reference stations around Australia. Based on remote sensing and across the entire Australian region 2011 (La Niña) was only modestly different from 2010 (El Niño) with the average temperature declining 0.2%, surface chlorophyll a up 3% and modelled primary production down 14%. Other changes included a poleward shift in Prochlorococcus and Synechococcus. Along the east coast, there was a reduction in salinity, increase in nutrients, Chlorophytes and Prasinophytes (taxa with chlorophyll b, neoxanthin and prasinoxanthin). The southwest region had a rise in the proportion of 19-hexoyloxyfucoxanthin; possibly coccolithophorids in eddies of the Leeuwin Current and along the sub-tropical front. Pennate diatoms increased, Ceratium spp. decreased and Scrippsiella spp. increased in 2011. Zooplankton biomass declined significantly in 2011. There was a reduction in the abundance of Calocalanus pavo and Temora turbinata and increases in Clausocalanus farrani, Oncaea scottodicarloi and Macrosetella gracilis in 2011. The changes in the plankton community during the strong La Niña of 2011 suggest that this climatic oscillation exacerbates the tropicalization of Australia

Sensing the ocean biological carbon pump from space: A review of capabilities, concepts, research gaps and future developments

The element carbon plays a central role in climate and life on Earth. It is capable of moving among the geosphere, cryosphere, atmosphere, biosphere and hydrosphere. This flow of carbon is referred to as the Earth's carbon cycle. It is also intimately linked to the cycling of other elements and compounds. The ocean plays a fundamental role in Earth's carbon cycle, helping to regulate atmospheric CO2 concentration. The ocean biological carbon pump (OBCP), defined as a set of processes that transfer organic carbon from the surface to the deep ocean, is at the heart of the ocean carbon cycle. Monitoring the OBCP is critical to understanding how the Earth's carbon cycle is changing. At present, satellite remote sensing is the only tool available for viewing the entire surface ocean at high temporal and spatial scales. In this paper, we review methods for monitoring the OBCP with a focus on satellites. We begin by providing an overview of the OBCP, defining and describing the pools of carbon in the ocean, and the processes controlling fluxes of carbon between the pools, from the surface to the deep ocean, and among ocean, land and atmosphere. We then examine how field measurements, from ship and autonomous platforms, complement satellite observations, provide validation points for satellite products and lead to a more complete view of the OBCP than would be possible from satellite observations alone. A thorough analysis is then provided on methods used for monitoring the OBCP from satellite platforms, covering current capabilities, concepts and gaps, and the requirement for uncertainties in satellite products. We finish by discussing the potential for producing a satellite-based carbon budget for the oceans, the advantages of integrating satellite-based observations with ecosystem models and field measurements, and future opportunities in space, all with a view towards bringing satellite observations into the limelight of ocean carbon research

The Marine Biodiversity Observation Network Plankton Workshops: Plankton Ecosystem Function, Biodiversity, and Forecasting—Research Requirements and Applications

Plankton is a massive and phylogenetically diverse group of thousands of prokaryotes, protists (unicellular eukaryotic organisms), and metazoans (multicellular eukaryotic organisms; Fig. 1). Plankton functional diversity is at the core of various ecological processes, including productivity, carbon cycling and sequestration, nutrient cycling (Falkowski 2012), interspecies interactions, and food web dynamics and structure (D'Alelio et al. 2016). Through these functions, plankton play a critical role in the health of the coastal and open ocean and provide essential ecosystem services. Yet, at present, our understanding of plankton dynamics is insufficient to project how climate change and other human-driven impacts affect the functional diversity of plankton. That limits our ability to predict how critical ecosystem services will change in the future and develop strategies to adapt to these changes. The Marine Biodiversity Observation Network (MBON; https://geobon.org/bons/thematic-bon/mbon/, last accessed date: 22 Dec 2021), with the support of the Modelling Different Components of Marine Plankton Biodiversity team (MODIV; https://modiv.w.uib.no/, last accessed date: 22 Dec 2021), organized four virtual workshops (first in November 2020, second and third in October 2021, and fourth in November 2021) titled: “Plankton ecosystem functions, biodiversity, and forecasting—research requirements and applications” (https://eqmh.github.io/MBON-Plankton/index.html, last accessed date: 22 Dec 2021). The first workshop held in November 2020 was an initiative of the US-MBON and MODIV teams to bring together members of the ocean sciences community involved in plankton observing and modeling to meet, build rapport, and exchange expertise. The following workshops were organized to accommodate time differences: one for South, Central, and North America in October 2021; one for Africa, Europe, the Middle East, and India in October 2021; and one for East Asia and Oceania in November 2021. Each workshop was held for two consecutive days, and participation was limited to 20–25 participants per workshop to enable interactive discussions. In total, 80 participants from 26 countries attended at least one of the workshops (Fig. 2). A detailed list of participants can be found in the workshops' website (https://eqmh.github.io/MBON-Plankton/participants.html, last accessed date: 22 Dec 2021). The United States of America and Australia were the countries with the most participants, followed by Canada, Germany, China, the United Kingdom, and Argentina. The objectives of the workshops were to: (1) identify requirements with respect to the definition of essential ocean variables (EOVs) and associated measurements, as well as compile the data needed to address critical knowledge gaps related to the role of plankton biodiversity functions to provide ecosystem services; (2) discuss ways to better link empirical observations to theoretical concepts of plankton biodiversity and ecosystem dynamics; and (3) suggest methods to better communicate the value of plankton to peers and non-scientific audiences