Gut microbiota of Type 1 diabetes patients with good glycaemic control and high physical fitness is similar to people without diabetes: an observational study

Type 1 diabetes is the product of a complex interplay between genetic susceptibility and exposure to environmental factors. Existing bacterial profiling studies focus on people who are most at risk at the time of diagnosis; there are limited data on the gut microbiota of people with long-standing Type 1 diabetes. This study compared the gut microbiota of patients with Type 1 diabetes and good glycaemic control and high levels of physical-fitness with that of matched controls without diabetes.Ten males with Type 1 diabetes and ten matched controls without diabetes were recruited; groups were matched for gender, age, BMI, peak oxygen uptake (VO2max ), and exercise habits. Stool samples were analysed using next-generation sequencing of the 16S rRNA gene to obtain bacterial profiles from each individual. Phylogenetic investigation of communities by reconstruction of unobserved states (PICRUSt) was implemented to predict the functional content of the bacterial operational taxonomic units.Faecalibacterium sp., Roseburia sp. and Bacteroides sp. were typically the most abundant members of the community in both patients with Type 1 diabetes and controls, and were present in every sample in the cohort. Each bacterial profile was relatively individual and no significant difference was reported between the bacterial profiles or the Shannon diversity indices of Type 1 diabetes compared with controls. The functional profiles were more conserved and the Type 1 diabetes group were comparable with the control group.We show that both gut microbiota and resulting functional bacterial profiles from patients with long-standing Type 1 diabetes in good glycaemic control and high physical fitness levels are comparable with those of matched people without diabetes. This article is protected by copyright. All rights reserved

Evolution of strigolactone receptors by gradual neofunctionalization of KAI2 paralogues

Background: Strigolactones (SLs) are a class of plant hormones that control many aspects of plant growth. The SL signalling mechanism is homologous to that of karrikins (KARs), smoke-derived compounds that stimulate seed germination. In angiosperms, the SL receptor is an a/p hydrolase known as DWARF14 (D14); its close homologue, KARRIKIN INSENSITIVE2 (KAI2), functions as a KAR receptor, and likely recognizes an uncharacterized, endogenous signal (‘KL’). Previous phylogenetic analyses have suggested that the KAI2 lineage is ancestral in land plants, and that canonical D14-type SL receptors only arose in seed plants; this is paradoxical, however, as nonvascular plants synthesize and respond to SLs. Results: We have used a combination of phylogenetic and structural approaches to re-assess the evolution of the D14/KAI2 family in land plants. We analyzed 339 members of the D14/KAI2 family from land plants and charophyte algae. Our phylogenetic analyses show that the divergence between the eu-KAI2 lineage and the DDK (D14/DLK2/KAI2) lineage that includes D14 occurred very early in land plant evolution. We show that eu-KAI2 proteins are highly conserved, and have unique features not found in DDK proteins. Conversely, we show that DDK proteins show considerable sequence and structural variation to each other, and lack clearly definable characteristics. We use homology modelling to show that the earliest members of the DDK lineage structurally resemble KAI2, and that SL receptors in non-seed plants likely do not have D14-like structure. We also show that certain groups of DDK proteins lack the otherwise conserved MAX2-interface, and may thus function independently of MAX2, which we show is highly conserved throughout land plant evolution. Conclusions: Our results suggest D14-like structure is not required for SL perception, and that SL perception has relatively relaxed structural requirements compared to KAI2-mediated signalling. We suggest that SL perception gradually evolved by neo-functionalization within the DDK lineage, and that the transition from KAI2-like to D14-like protein may have been driven by interactions with protein partners, rather than being required for SL perception per se

Tb or not Tb: Banding in Turbidite Sandstones

Recognition and interpretation of sedimentary structures is fundamental to understanding sedimentary processes. Banded sandstones are an enigmatic sedimentary facies comprising alternating mud-rich (as matrix and/or mud clasts) and cleaner sand layers. The juxtaposition of hydrodynamically different grain sizes contradicts established models of cleaner-sand bedform development. Here, outcrop, subsurface core, and petrographic data from three deep-water systems, with well-constrained paleogeographic contexts, are used to describe the range of sedimentary textures, bedform morphologies, and facies associations, and to quantify the mud content of banding. Banding can occur in any part of a bed (base, middle, or top), but it typically overlies a structureless basal sandstone or mud-clast conglomerate lag, and is overlain by clean parallel-laminated sandstone and/or ripple cross-lamination. Banding morphology ranges from sub-parallel to bedforms that comprise low-angle laminae with discontinuous lenses of mudstone, or asymmetric bedforms comprising steeply dipping foresets that transition downstream into low-amplitude bedwaves, or steeply dipping ripple-like bedforms with heterolithic foresets. This style of banding is interpreted as a range of bedforms that form progressively in the upper-stage plane-bed flow regime via tractional reworking beneath mud-laden transitional plug flows. The balance of cohesive and turbulent forces, and the rate of flow deceleration (aggradation rate), govern the style of deposit. Banded sandstones and linked debrites are rarely found juxtaposed together in the same bed because they are distributed preferentially in proximal and distal settings, respectively. Understanding the origins of banding in turbidite sandstones, the conditions under which it forms, and its distribution across deep-water systems and relationship to linked debrites, is important for it to be used effectively as a tool to interpret the geological record

Topographic controls on the development of contemporaneous but contrasting basin-floor depositional architectures

Sediment-laden gravity-driven-flow deposits on the basin floor are typically considered to form either discrete lobes that stack compensationally, or packages of laterally extensive beds, commonly termed “sheets.” These end-member stacking patterns are documented in several basinfills. However, whether they can coexist in a single basin, or there are intermediate or transitional stacking patterns, is poorly understood. An analysis of depositional architecture and stacking patterns along a 70 km dip-oriented transect in the Upper Broto Turbidite System (Jaca Basin, south-central Pyrenees, Spain), which displays disparate stacking patterns in contemporaneous strata, is presented. Proximal and medial deposits are characterized by discrete packages of clean sandstones with sharp bed tops which exhibit predictable lateral and longitudinal facies changes, and are interpreted as lobes. Distal deposits comprise both relatively clean sandstones and hybrid beds that do not stack to form lobes. Instead, localized relatively thick hybrid beds are inferred to have inhibited the development of lobes. Hybrid beds developed under flows which were deflected and entrained carbonate mud substrate off a carbonate slope that bounded the basin to the south; evidence for this interpretation includes: 1) divergent paleoflow indicators and hummock-like features in individual beds; 2) a decrease in hybrid-bed thickness and abundance away from the lateral confining slope; 3) a carbonate-rich upper division, not seen in more proximal turbidites. The study demonstrates the co-occurrence of different styles of basin-floor stacking patterns in the same stratigraphic interval, and suggests that characterization of deep-water systems as either lobes or sheets is a false dichotomy

Using keystroke logging to understand writers’ processes on a reading-into-writing test

Background Integrated reading-into-writing tasks are increasingly used in large-scale language proficiency tests. Such tasks are said to possess higher authenticity as they reflect real-life writing conditions better than independent, writing-only tasks. However, to effectively define the reading-into-writing construct, more empirical evidence regarding how writers compose from sources both in real-life and under test conditions is urgently needed. Most previous process studies used think aloud or questionnaire to collect evidence. These methods rely on participants’ perceptions of their processes, as well as their ability to report them. Findings This paper reports on a small-scale experimental study to explore writers’ processes on a reading-into-writing test by employing keystroke logging. Two L2 postgraduates completed an argumentative essay on computer. Their text production processes were captured by a keystroke logging programme. Students were also interviewed to provide additional information. Keystroke logging like most computing tools provides a range of measures. The study examined the students’ reading-into-writing processes by analysing a selection of the keystroke logging measures in conjunction with students’ final texts and interview protocols. Conclusions The results suggest that the nature of the writers’ reading-into-writing processes might have a major influence on the writer’s final performance. Recommendations for future process studies are provided

Layered convection as the origin of Saturn's luminosity anomaly

As they keep cooling and contracting, Solar System giant planets radiate more energy than they receive from the Sun. Applying the first and second principles of thermodynamics, one can determine their cooling rate, luminosity, and temperature at a given age. Measurements of Saturn's infrared intrinsic luminosity, however, reveal that this planet is significantly brighter than predicted for its age. This excess luminosity is usually attributed to the immiscibility of helium in the hydrogen-rich envelope, leading to "rains" of helium-rich droplets. Existing evolution calculations, however, suggest that the energy released by this sedimentation process may not be sufficient to resolve the puzzle. Here, we demonstrate using planetary evolution models that the presence of layered convection in Saturn's interior, generated, like in some parts of Earth oceans, by the presence of a compositional gradient, significantly reduces its cooling. It can explain the planet's present luminosity for a wide range of configurations without invoking any additional source of energy. This suggests a revision of the conventional homogeneous adiabatic interior paradigm for giant planets, and questions our ability to assess their heavy element content. This reinforces the possibility for layered convection to help explaining the anomalously large observed radii of extrasolar giant planets.Comment: Published in Nature Geoscience. Online publication date: April 21st, 2013. Accepted version before journal editing and with Supplementary Informatio

Physical and immunological aspects of exercise in chronic diseases.

Physical inactivity and sedentary lifestyles are believed to be independent risk factors for the occurrence of numerous diseases, including, obesity, Type 2 diabetes, metabolic syndrome, cardiovascular disease, cancer and mental health, all leading to substantial morbidity and/or premature death. It has been found that regular exercise, is associated with better quality of life and health outcomes, and reduces the risk of cardiovascular disease and cancer. Here, we review the effects regular exercise has on mental health and well-being, on the immune system and in cancer, cardiovascular disease, autoimmunity and metabolic syndrome. Is exercise the new immunotherapy to treat diseases

Disgust sensitivity is not associated with health in a rural Bangladeshi sample.

Disgust can be considered a psychological arm of the immune system that acts to prevent exposure to infectious agents. High disgust sensitivity is associated with greater behavioral avoidance of disease vectors and thus may reduce infection risk. A cross-sectional survey in rural Bangladesh provided no strong support for this hypothesis. In many species, the expression of pathogen- and predator-avoidance mechanisms is contingent on early life exposure to predators and pathogens. Using childhood health data collected in the 1990s, we examined if adults with more infectious diseases in childhood showed greater adult disgust sensitivity: no support for this association was found. Explanations for these null finding and possible directions for future research are discussed

The Reform of Employee Compensation in China’s Industrial Enterprises

Although employee compensation reform in Chinese industrial sector has been discussed in the literature, the real changes in compensation system and pay practices have received insufficient attention and warrant further examination. This paper briefly reviews the pre- and post-reform compensation system, and reports the results of a survey of pay practices in the four major types of industrial enterprises in China. The research findings indicate that the type of enterprise ownership has little influence on general compensation practices, adoption of profit-sharing plans, and subsidy and allowance packages. In general, pay is linked more to individual performance and has become an important incentive to Chinese employees. However, differences are found across the enterprise types with regard to performance-related pay. Current pay practices are positively correlated to overall effectiveness of the enterprise

Bronchoalveolar lavage in infants with recurrent lower respiratory symptoms

Background: Few data are available about the inflammatory cytokine profile of bronchoalveolar lavage (BAL) from young children with frequent wheeze. The first aim was to investigate the BAL cellular and cytokine profiles in infants with recurrent lower respiratory symptoms in whom bronchoscopy was indicated for clinical symptom evaluation. The second aim was to relate the BAL results with the histological findings of the endobronchial carina biopsies. Methods: Thirty-nine infants (median age 0.9 years) underwent lung function testing by whole-body plethysmography prior to the bronchoscopy. The BAL differential cell counts and cytokine levels were quantified. These findings were compared with the histological findings of the endobronchial carina biopsies. Results: The differential cytology reflected mainly that described for healthy infants with lymphocyte counts at the upper range level. A positive association between BAL CD8+ lymphocytes and neutrophils and endobronchial reticular basement membrane was found. Detectable levels of pro-inflammatory cytokine proteins IL-1 beta, IL-17A, IL-18, IL-23, and IL-33 were found, whereas levels of Th2-type cytokine proteins were low. Frequent wheeze was the only clinical characteristic significantly related to detectable combined pro-inflammatory cytokine profile. Lung function did not correlate with any cytokine. Conclusions: A positive association between BAL CD8+ lymphocytes and neutrophils and endobronchial reticular basement thickness was found. Detectable production of pro-inflammatory cytokines associated positively with frequent wheeze.Peer reviewe