Taxonomic surrogacy in biodiversity assessments, and the meaning of Linnaean ranks

Copyright © 2006 The Natural History MuseumThe majority of biodiversity assessments use species as the base unit. Recently, a series of studies have suggested replacing numbers of species with higher ranked taxa (genera, families, etc.); a method known as taxonomic surrogacy that has an important potential to save time and resources in assesments of biological diversity. We examine the relationships between taxa and ranks, and suggest that species/higher taxon exchanges are founded on misconceptions about the properties of Linnaean classification. Rank allocations in current classifications constitute a heterogeneous mixture of various historical and contemporary views. Even if all taxa were monophyletic, those referred to the same rank would simply denote separate clades without further equivalence. We conclude that they are no more comparable than any other, non-nested taxa, such as, for example, the genus Rattus and the phylum Arthropoda, and that taxonomic surrogacy lacks justification. These problems are also illustrated with data of polychaetous annelid worms from a broad-scale study of benthic biodiversity and species distributions in the Irish Sea. A recent consensus phylogeny for polychaetes is used to provide three different family-level classifications of polychaetes. We use families as a surrogate for species, and present Shannon–Wiener diversity indices for the different sites and the three different classifications, showing how the diversity measures rely on subjective rank allocations.Y. Bertrand, F. Pleijel and G. W. Rous

How generalist are these forest specialists? What Sweden's avian indicators indicate

Monitoring of forest biodiversity and habitats is an important part of forest conservation, but due to the impossible task of monitoring all species, indicator species are frequently used. However, reliance on an incorrect indicator of valuable habitat can reduce the efficiency of conservation efforts. Birds are often used as indicators as they are charismatic, relatively easy to survey, and because we often have knowledge of their habitat and resource requirements. In the Swedish government's environmental quality goals, there are a number of bird species identified as being associated with 'older' and 'high natural value' forests. Here we evaluate the occurrence of four of these indicator species using data from 91 production forest stands and 10 forest reserves in southern Sweden. The bird species assessed are willow tit Poecile montanus, coal tit Periparus ater, European crested tit Lophophanes cristatus and Eurasian treecreeper Certhia familiaris. For the production stands assessed, these indicator species exhibited no significant preferences regarding forest composition and structure, indicating a wider range of habitat associations than expected. These species frequently showed territorial behavior in forest stands <60 and even 40 years of age; much younger than the 120-year threshold for 'older forest' as defined by governmental environmental goals. As almost 80% of the production stands >= 10 years old included at least one of the four indicator species, this raises questions regarding the suitability of these species as indictors of forests of high conservational value in southern Sweden. Notably, besides the four species assessed here, none of the additional indicator taxa identified by the government, were recorded in the 10 reserves. This outcome may reflect the difficulties involved in finding bird indicator species indicative of high natural values in this region. Our results highlight the importance of coupling bird surveys with quantified assessments of proximate vegetation cover

Identification of different song types in the European Nightjar Caprimulgus europaeus

Capsule: Two distinct song types were identified for male European Nightjars Caprimulgus europaeus with their relative frequency of use changing through the breeding season, indicating a possible link to paired status. Aims: To test whether two song types could be defined in audio recordings and whether use differed in relation to the paired status of males. Methods: Unattended acoustic recording devices were placed at a Nightjar study site in Nottinghamshire, United Kingdom, and recordings of churring vocalizations were made during two periods of the breeding season. These recordings were then analyzed to identify the presence/absence of the song terminal phrase and associated audible features. Results: Two distinct song types were identified in the recorded audio data that differed in their terminal phrasing and overall song duration. The number of Nightjar songs with a terminal phrase increased significantly between the two sampling periods, from lower levels during the site arrival period, to higher levels during the first clutch initiation period. Conclusion: This study showed that the use of Nightjar song types appears to vary through the breeding season, with males being more likely to produce song with a terminal phrase during the first clutch initiation period, when they are more likely to be paired or in the presence of a female. The unattended acoustic recording method may provide a minimally intrusive means of assessing the number of Nightjar breeding pairs and not just singing males

Seasonal benefits of farmland pond management for birds

Capsule: There is seasonal variation in the benefits that birds can take from restored farmland ponds. Aims: To evaluate season-specific benefits of farmland pond restoration for local bird communities. Methods: Bird communities were recorded at unmanaged overgrown and managed open-canopy farmland ponds over the breeding, post-breeding and winter seasons. Results were compared and related to seasonal variation in environmental conditions of within-pond and marginal habitats to identify predictors of local bird communities. Results: Bird communities at managed open-canopy ponds showed a higher abundance and species richness over all seasons and displayed pronounced seasonal shifts in composition. Warblers and other specialised bird species were frequently observed at open-canopy sites over the breeding and post-breeding seasons but were generally absent from overgrown ponds. While pond management and landscape connectivity had a consistent positive influence on bird communities over all seasons, the importance of other predictors such as bramble area varied seasonally. Conclusions: Our study highlights a key role of pond management for farmland bird conservation. In addition, the identified seasonal predictors of bird assemblages provide valuable lessons for the design of agri-environment prescriptions for farmland ponds, highlighting the importance of bramble-dominated patches and pond marginal habitat over the breeding season and of a strong connectivity between pond margins and surrounding semi-natural habitats throughout the year

Using microphone arrays to investigate microhabitat selection by declining breeding birds

Understanding the microhabitat preferences of animals can help managers to develop better conservation and recovery strategies but this is challenging. Traditional methods are limited by cost, accuracy and human resources. In this study, we investigated avian microhabitat preferences using microphone arrays that are capable of accurately locating vocalizing birds. Our objective was to identify the microhabitat associations of two common species in steep population decline, the Boreal Chickadee Poecile hudsonicus and the Cape May Warbler Setophaga tigrina. We deployed 68 eight‐channel arrays at random locations in Labrador, Canada, during the 2016 avian breeding season. We returned in 2017 to the 18 array locations where the target species had been detected the previous year and characterized the microhabitat at the exact locations where they had been detected. We also characterized the microhabitat at randomly determined control locations. Results show that Boreal Chickadees select trees with greater diameter‐at‐breast‐height that are surrounded by greater stem density. We did not find evidence that Cape May Warblers exhibit microhabitat selection during song production. The study shows that microphone arrays are an effective tool for identifying preferred microhabitat that could be incorporated into future conservation or recovery strategies

Prompt K_short production in pp collisions at sqrt(s)=0.9 TeV

The production of K_short mesons in pp collisions at a centre-of-mass energy of 0.9 TeV is studied with the LHCb detector at the Large Hadron Collider. The luminosity of the analysed sample is determined using a novel technique, involving measurements of the beam currents, sizes and positions, and is found to be 6.8 +/- 1.0 microbarn^-1. The differential prompt K_short production cross-section is measured as a function of the K_short transverse momentum and rapidity in the region 0 < pT < 1.6 GeV/c and 2.5 < y < 4.0. The data are found to be in reasonable agreement with previous measurements and generator expectations.Comment: 6+18 pages, 6 figures, updated author lis