57 research outputs found

    Pleosporales

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    One hundred and five generic types of Pleosporales are described and illustrated. A brief introduction and detailed history with short notes on morphology, molecular phylogeny as well as a general conclusion of each genus are provided. For those genera where the type or a representative specimen is unavailable, a brief note is given. Altogether 174 genera of Pleosporales are treated. Phaeotrichaceae as well as Kriegeriella, Zeuctomorpha and Muroia are excluded from Pleosporales. Based on the multigene phylogenetic analysis, the suborder Massarineae is emended to accommodate five families, viz. Lentitheciaceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae and Trematosphaeriaceae

    Impact of Human Management on the Genetic Variation of Wild Pepper, Capsicum annuum var. glabriusculum

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    Management of wild peppers in Mexico has occurred for a long time without clear phenotypic signs of domestication. However, pre-domestication management could have implications for the population's genetic richness. To test this hypothesis we analysed 27 wild (W), let standing (LS) and cultivated (C) populations, plus 7 samples from local markets (LM), with nine polymorphic microsatellite markers. Two hundred and fifty two alleles were identified, averaging 28 per locus. Allele number was higher in W, and 15 and 40% less in LS and C populations, respectively. Genetic variation had a significant population structure. In W populations, structure was associated with ecological and geographic areas according to isolation by distance. When LM and C populations where included in the analysis, differentiation was no longer apparent. Most LM were related to distant populations from Sierra Madre Oriental, which represents their probable origin. Historical demography shows a recent decline in all W populations. Thus, pre-domestication human management is associated with a significant reduction of genetic diversity and with a loss of differentiation suggesting movement among regions by man. Measures to conserve wild and managed populations should be implemented to maintain the source and the architecture of genetic variation in this important crop relative

    Evolutionary diversity and developmental regulation of X-chromosome inactivation

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    X-chromosome inactivation (XCI) results in the transcriptional silencing of one X-chromosome in females to attain gene dosage parity between XX female and XY male mammals. Mammals appear to have developed rather diverse strategies to initiate XCI in early development. In placental mammals XCI depends on the regulatory noncoding RNA X-inactive specific transcript (Xist), which is absent in marsupials and monotremes. Surprisingly, even placental mammals show differences in the initiation of XCI in terms of Xist regulation and the timing to acquire dosage compensation. Despite this, all placental mammals achieve chromosome-wide gene silencing at some point in development, and this is maintained by epigenetic marks such as chromatin modifications and DNA methylation. In this review, we will summarise recent findings concerning the events that occur downstream of Xist RNA coating of the inactive X-chromosome (Xi) to ensure its heterochromatinization and the maintenance of the inactive state in the mouse and highlight similarities and differences between mammals

    Evaluation of appendicitis risk prediction models in adults with suspected appendicitis

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    Background Appendicitis is the most common general surgical emergency worldwide, but its diagnosis remains challenging. The aim of this study was to determine whether existing risk prediction models can reliably identify patients presenting to hospital in the UK with acute right iliac fossa (RIF) pain who are at low risk of appendicitis. Methods A systematic search was completed to identify all existing appendicitis risk prediction models. Models were validated using UK data from an international prospective cohort study that captured consecutive patients aged 16–45 years presenting to hospital with acute RIF in March to June 2017. The main outcome was best achievable model specificity (proportion of patients who did not have appendicitis correctly classified as low risk) whilst maintaining a failure rate below 5 per cent (proportion of patients identified as low risk who actually had appendicitis). Results Some 5345 patients across 154 UK hospitals were identified, of which two‐thirds (3613 of 5345, 67·6 per cent) were women. Women were more than twice as likely to undergo surgery with removal of a histologically normal appendix (272 of 964, 28·2 per cent) than men (120 of 993, 12·1 per cent) (relative risk 2·33, 95 per cent c.i. 1·92 to 2·84; P < 0·001). Of 15 validated risk prediction models, the Adult Appendicitis Score performed best (cut‐off score 8 or less, specificity 63·1 per cent, failure rate 3·7 per cent). The Appendicitis Inflammatory Response Score performed best for men (cut‐off score 2 or less, specificity 24·7 per cent, failure rate 2·4 per cent). Conclusion Women in the UK had a disproportionate risk of admission without surgical intervention and had high rates of normal appendicectomy. Risk prediction models to support shared decision‐making by identifying adults in the UK at low risk of appendicitis were identified

    Quantum interference effects on the intensity of the G modes in double-walled carbon nanotubes

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    International audienceThe effects of quantum interferences on the excitation dependence of the intensity of G modes have beeninvestigated on single-walled carbon nanotubes [Duque et al., Phys. Rev. Lett. 108, 117404 (2012)]. In this work,by combining optical absorption spectroscopy and Raman scattering on individual index identified double-walledcarbon nanotubes, we examine the experimental excitation dependence of the intensity of longitudinal opticaland transverse optical G modes of the constituent inner and outer single-walled carbon nanotubes. The observedstriking dependencies are understood in terms of quantum interference effects. Considering such effects, the excitation dependence of the different components of the G modes permits us to unambiguously assign each ofthem as originating from the longitudinal or transverse G modes of inner and outer tubes

    Optically active cross-band transition in double-walled carbon nanotube and its impact on Raman resonances

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    International audienceDouble-walled carbon nanotubes (DWNTs), often regarded as the simplest one-dimensional (1D) van der Waals moiré superlattices, are the ideal structures to explore the interlayer coupling, including mechanical and electronical coupling, at the nanoscale in 1D systems. By combining spatial modulation spectroscopy (SMS) and resonant Raman scattering (RRS) experiments on well-identified individual free-standing DWNTs with the calculations of their optical absorption by using the recursion method with non-orthogonal tight-binding (NTB) basis functions, we are able to unambiguously assign the nature, namely mirror transition or cross transition, of each optical transitions in DWNTs. Our study identifies and allows to determine the conditions of the mixing of the electronic states leading to the appearance of cross transitions in the optical absorption of DWNTs, beyond of the so-called Koshino’s criteria previously derived. On the other hand, the striking behavior of the resonant excitation profile (REP) of the Raman active modes around the cross transition reveals the strong sensitivity of the modes intensity on the electronic interlayer coupling in DWNTs, emphasizing the relevance of Raman spectroscopy for studying the electronic and mechanical coupling at the nanoscale

    Excitonic optical transitions characterized by Raman excitation profiles in single-walled carbon nanotubes

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    International audienceWe examine the excitonic nature of the E33 optical transition of the individual free-standing index-identified(23,7) single-walled carbon nanotube by means of the measurements of its radial-breathing-mode and G-modeRaman excitation profiles. We confirm that it is impossible to determine unambiguously the nature of its E33optical transition (excitonic vs band to band) based only on the excitation profiles. Nevertheless, by combiningRaman scattering, Rayleigh scattering, and optical absorption measurements on strictly the same individual(23,7) single-walled carbon nanotube, we show that the absorption, Rayleigh spectra, and Raman excitationprofiles of the longitudinal and transverse G modes are best fitted by considering the nature of the E33 transitionas excitonic. The fit of the three sets of data gives close values of the transition energy E33 and damping parameter. This comparison shows that the fit of the Raman excitation profiles provides with good accuracy the energy and damping parameter of the excitonic optical transitions in single-walled carbon nanotubes
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