High flux table-top soft X-ray source driven by sub-2-cycle, CEP stable, 1.85 μm 1 kHz pulses for carbon K-edge spectroscopy

We report on the first table-top high flux source of coherent soft X-ray radiation up to 400 eV, operating at 1 kHz. This source covers the carbon K-edge with a beam brilliance of (4.3 ± 1.2) × 1015 photons/s/mm2/strad/10% bandwidth and a photon flux of (1.9 ± 0.1) × 107 photons/s/1% bandwidth. We use this source to demonstrate table-top X-ray near edge fine structure spectroscopy at the carbon K-edge of a polyimide foil and retrieve the specific absorption features corresponding to the binding orbitals of the carbon atoms in the foil.Peer ReviewedPostprint (author's final draft

A GPU-accelerated real-time NLMeans algorithm for denoising color video sequences

Abstract. The NLMeans filter, originally proposed by Buades et al., is a very popular filter for the removal of white Gaussian noise, due to its simplicity and excellent performance. The strength of this filter lies in exploiting the repetitive character of structures in images. However, to fully take advantage of the repetitivity a computationally extensive search for similar candidate blocks is indispensable. In previous work, we presented a number of algorithmic acceleration techniques for the NLMeans filter for still grayscale images. In this paper, we go one step further and incorporate both temporal information and color information into the NLMeans algorithm, in order to restore video sequences. Starting from our algorithmic acceleration techniques, we investigate how the NLMeans algorithm can be easily mapped onto recent parallel computing architectures. In particular, we consider the graphical processing unit (GPU), which is available on most recent computers. Our developments lead to a high-quality denoising filter that can process DVD-resolution video sequences in real-time on a mid-range GPU

Evolutionary history of Podarcis tiliguerta on Corsica and Sardinia.

BACKGROUND: Podarcis tiliguerta is a wall lizard endemic to the Mediterranean islands of Corsica and Sardinia. Previous findings of high mtDNA and morphological diversity have led to the suggestion that it may represent a species complex. Here, we analysed mitochondrial and nuclear markers (mtDNA, 3110 bp; 6 nDNA loci, 3961 bp) in P. tiliguerta sampled from thirty-two localities across Corsica and Sardinia. RESULTS: We find much greater intraspecific genetic divergence than between sister species of other Mediterranean island Podarcis, i.e., between P. lilfordi and P. pityusensis. We detected three mtDNA clusters in Corsica (North, South-East and South-West) and either two or three in Sardinia (North vs. South) depending on the clustering method. Only one or two nDNA groups were identified within each main island (again, depending on the method). A Bayesian time-calibrated multispecies coalescent tree was obtained from mtDNA and provided statistical support for a Miocene origin of the species (13.87 Ma, 95% HPD: 18.30-10.77 Ma). The posterior mean divergence time for the Corsican and Sardinian lineages was 12.75 Ma ago (95% HPD: 16.94-9.04 Ma). CONCLUSION: The results support the evolutionary distinctiveness of Corsican and Sardinian populations and also indicate a lack of post-divergence migration despite periods of contact being possible. Further to this, species delimitation analyses of Corsican and Sardinian lineages provided statistical support for their recognition as distinct (sister) taxa. Our results provide new insights into the biogeography of the Mediterranean biodiversity hotspot, and contribute important findings relevant to the systematics and evolution of this speciose lizard genus

Four-dimensional Cone Beam CT Reconstruction and Enhancement using a Temporal Non-Local Means Method

Four-dimensional Cone Beam Computed Tomography (4D-CBCT) has been developed to provide respiratory phase resolved volumetric imaging in image guided radiation therapy (IGRT). Inadequate number of projections in each phase bin results in low quality 4D-CBCT images with obvious streaking artifacts. In this work, we propose two novel 4D-CBCT algorithms: an iterative reconstruction algorithm and an enhancement algorithm, utilizing a temporal nonlocal means (TNLM) method. We define a TNLM energy term for a given set of 4D-CBCT images. Minimization of this term favors those 4D-CBCT images such that any anatomical features at one spatial point at one phase can be found in a nearby spatial point at neighboring phases. 4D-CBCT reconstruction is achieved by minimizing a total energy containing a data fidelity term and the TNLM energy term. As for the image enhancement, 4D-CBCT images generated by the FDK algorithm are enhanced by minimizing the TNLM function while keeping the enhanced images close to the FDK results. A forward-backward splitting algorithm and a Gauss-Jacobi iteration method are employed to solve the problems. The algorithms are implemented on GPU to achieve a high computational efficiency. The reconstruction algorithm and the enhancement algorithm generate visually similar 4D-CBCT images, both better than the FDK results. Quantitative evaluations indicate that, compared with the FDK results, our reconstruction method improves contrast-to-noise-ratio (CNR) by a factor of 2.56~3.13 and our enhancement method increases the CNR by 2.75~3.33 times. The enhancement method also removes over 80% of the streak artifacts from the FDK results. The total computation time is ~460 sec for the reconstruction algorithm and ~610 sec for the enhancement algorithm on an NVIDIA Tesla C1060 GPU card.Comment: 20 pages, 3 figures, 2 table

The meaning of aggression varies across culture : testing the measurement invariance of the Refined Aggression Questionnaire in samples from Spain, the US, and Hong Kong

Cultural differences in aggression are still poorly understood. The purpose of this article is to assess whether a tool for measuring aggression has the same meaning across cultures. Analyzing samples from Spain (n=262), US (n=344) and Hong-Kong (n=645), we used confirmatory factor analysis to investigate measurement invariance of the refined version of the Aggression-Questionnaire (Bryant & Smith, 2001). The measurement of aggression was more equivalent between the Chinese and Spanish versions than between these two and the American version. Aggression does not show invariance at the culture level. Cultural variables such as affective autonomy or individualism may influence the meaning of aggression. Aggressive behavior models can be improved by incorporating cultural variable

Slow-spin relaxation of a low-spin S = 1/2 FeIII carborane complex

In this communication, we report the first evidence of slow-spin relaxation of a low-spin FeIII carborane complex. Iron S=1/2 complexes showing such behaviour are specially appealing as qubits candidates because they fulfil some of the main requirements to reach long decoherence times: moderate magnetic anisotropy, small spin, metal element mainly with zero-nuclear spin and furthermore, large versatility to introduce chemical modifications

Publisher's Note: “Attosecond state-resolved carrier motion in quantum materials probed by soft x-ray XANES” [Appl. Phys Rev. 8, 011408 (2021)]

Recent developments in attosecond technology led to table-top x-ray spectroscopy in the soft x-ray range, thus uniting the element- and state-specificity of core-level x-ray absorption spectroscopy with the time resolution to follow electronic dynamics in real-time. We describe recent work in attosecond technology and investigations into materials such as Si, SiO2, GaN, Al2O3, Ti, and TiO2, enabled by the convergence of these two capabilities. We showcase the state-of-the-art on isolated attosecond soft x-ray pulses for x-ray absorption near-edge spectroscopy to observe the 3d-state dynamics of the semi-metal TiS2 with attosecond resolution at the Ti L-edge (460 eV). We describe how the element- and state-specificity at the transition metal L-edge of the quantum material allows us to unambiguously identify how and where the optical field influences charge carriers. This precision elucidates that the Ti:3d conduction band states are efficiently photo-doped to a density of 1.9 × 1021 cm−3. The light-field induces coherent motion of intra-band carriers across 38% of the first Brillouin zone. Lastly, we describe the prospects with such unambiguous real-time observation of carrier dynamics in specific bonding or anti-bonding states and speculate that such capability will bring unprecedented opportunities toward an engineered approach for designer materials with pre-defined properties and efficiency. Examples are composites of semiconductors and insulators like Si, Ge, SiO2, GaN, BN, and quantum materials like graphene, transition metal dichalcogens, or high-Tc superconductors like NbN or LaBaCuO. Exiting are prospects to scrutinize canonical questions in multi-body physics, such as whether the electrons or lattice trigger phase transitions

GPU-based Low-dose 4DCT Reconstruction via Temporal Non-local Means

Four-dimensional computed tomography (4DCT) has been widely used in cancer radiotherapy for accurate target delineation and motion measurement for tumors in thorax and upper abdomen areas. However, 4DCT simulation is associated with much higher imaging dose than conventional CT simulation, which is a major concern in its clinical application. Conventionally, each phase of 4DCT is reconstructed independently using the filtered backprojection (FBP) algorithm. The basic idea of our new algorithm is that, by utilizing the common information among different phases, the input information required to reconstruct image of high quality, and thus the imaging dose, can be reduced. We proposed a temporal non-local means (TNLM) method to explore the inter-phase similarity. All phases of the 4DCT images are reconstructed simultaneously by minimizing a cost function consisting of a data fidelity term and a TNLM regularization term. We utilized a forward-backward splitting algorithm and a Gauss-Jacobi iteration method to efficiently solve the minimization problem. The algorithm was also implemented on graphics processing unit (GPU) to achieve a high computational speed. Our reconstruction algorithm has been tested on a digital NCAT thorax phantom in three low dose scenarios. Our new algorithm generates visually much better CT images containing less image noise and streaking artifacts compared with the standard FBP algorithm. Quantitative analysis shows that much higher contrast-to-noise ratio and signal-to-noise ratio can be obtained using our algorithm. The total reconstruction time for all 10 phases of a slice ranges from 90 to 140 seconds on an NVIDIA Tesla C1060 GPU card.Comment: 14 pages, 4 figures, and 2 tables, accepted by Med. Phy

First narrow-band search for continuous gravitational waves from known pulsars in advanced detector data

Spinning neutron stars asymmetric with respect to their rotation axis are potential sources of continuous gravitational waves for ground-based interferometric detectors. In the case of known pulsars a fully coherent search, based on matched filtering, which uses the position and rotational parameters obtained from electromagnetic observations, can be carried out. Matched filtering maximizes the signalto- noise (SNR) ratio, but a large sensitivity loss is expected in case of even a very small mismatch between the assumed and the true signal parameters. For this reason, narrow-band analysis methods have been developed, allowing a fully coherent search for gravitational waves from known pulsars over a fraction of a hertz and several spin-down values. In this paper we describe a narrow-band search of 11 pulsars using data from Advanced LIGO’s first observing run. Although we have found several initial outliers, further studies show no significant evidence for the presence of a gravitational wave signal. Finally, we have placed upper limits on the signal strain amplitude lower than the spin-down limit for 5 of the 11 targets over the bands searched; in the case of J1813-1749 the spin-down limit has been beaten for the first time. For an additional 3 targets, the median upper limit across the search bands is below the spin-down limit. This is the most sensitive narrow-band search for continuous gravitational waves carried out so far