Quaternary River Diversions in the London Basin and the Eastern English Channel

The principal river of the London basin, the Thames, has experienced a number of course changes during the Quaternary. Some, at least, of these are known to result directly from glaciation. In the early Quaternary the river flowed to the north of London across East Anglia to the north coast of Norfolk. By the early Middle Pleistocene it had changed its course to flow eastwards near the Suffolk - Essex border into the southern North Sea. The Thames valley to the north of London was blocked by ice during the Anglian/Elsterian glaciation, causing a series of glacial lakes to form. Overflow of these lakes brought the river into its modern valley through London. It is thought that this valley already existed by the Anglian in the form of a tributary of the north-flowing River Medway, which joined the old Thames valley near Clacton. Also during the Anglian/Elsterian glaciation. British and continental ice masses are thought to have joined in the northern part of the North Sea basin, causing a large lake to form between the east coast of England and the Netherlands. It is widely believed that the overflow from this lake caused the first breach in the Weald-Artois Ridge, bringing about the formation of the Strait of Dover. Prior to the glaciation the Thames, in common with rivers from the continent (including the Rhine and Meuse), flowed into the North Sea Basin. It seems that, after the lake overflow, these rivers together drained southwards into the English Channel. Whether this southern drainage route was adopted during all later periods of low sea level remains to be determined, but it seems certain that this was the case during the last glacial.De nombreuses captures ont modifé le cours de la Tamise et des autres fleuves du bassin de Londres au cours du Quaternaire. L'une d'entre elles au moins est le résultat direct des glaciations. Au Quaternaire inférieur. Ia Tamise coulait au nord de Londres à travers l'East Anglia, vers la côte nord du Norfolk. Au début du Pléistocène moyen, elle avait changé de cours pour se diriger vers l'est, à la frontière entre Essex et Suffolk, vers le sud de la mer du Nord. Au cours du maximum glaciaire de l'Anglien/Elstérien, les glaces ont bloqué la vallée de la Tamise au nord de Londres, provoquant la formation de lacs. La vidange de ces lacs a provoqué le déversement de la rivière vers sa basse vallée actuelle. Celle-ci existait déjà, mais était alors parcourue par un affluent de la Medway qui coulait vers le nord, et rejoignait l'ancienne vallée de la Tamise aux environs de Clacton. Il semble que durant les glaciations de l'Anglien et de l'Elstérien, les calottes glaciaires britannique et continentale étaient coalescentes dans la partie septentrionale du bassin de la mer du Nord. Il en est résulté la formation d'un vaste lac entre les côtes de l'Angleterre orientale, du Danemark et des Pays-Bas. L'écoulement de ce lac s'est probablement fait par la Manche, entre le Weald et le massif de l'Artois, provoquant la formation du Pas de Calais. Avant la glaciation. Ia Tamise confluait avec les fleuves issus du continent, le Rhin et la Meuse, et se jetait dans la mer du Nord. Il semble que se soit seulement après le débordement du lac que ces fleuves se sont écoulés vers le sud en direction de la Manche. Il reste à déterminer si les fleuves ont conservé ce cours vers le sud durant chaque épisode de bas niveau marin. Quoi qu'il en soit, il est certain que c'était le cas durant la dernière glaciation.Der wichtigste Fluss des Londoner Beckens, die Themse, erlebte wâhrend des Quartàrs eine Reihe von Verlaufsànderungen. Mindestens einige davon sind ein direktes Résultat der Vereisung. Im frùhen Quarter floss der Fluss vom Norden Londons durch Ost-England zur Nordkùste von Norfolk. Zu Anfang des mittleren Pleistozàn hatte er seinen Lauf geândert, um ostwàrts nahe der Suffolk-Essex-Grenze in die sùdliche Nordsee zu fliessen. Das Themse-Tal nôrdlich Londons war wâhrend der Anglia-Elster-Vereisung durch Eis blockiert, was zur Bildung einer Reihe von glazialen Seen fùhrte. Der Ùberlauf dieser Seen brachte den Fluss in sein modernes TaI quer durch London. Man glaubt, dass dieses TaI schon im Anglium existierte in Form eines Zuflusses des nach Norden fliessenden Medwey-Flusses, der in das alte Themse-Tal bei Clacton eintrat. Genauso denkt man, dass wâhrend der Anglia-Elster-Vereisung britische und kontinentale Eismassen sich im nôrdlichen Teil des Nordsee-Beckens vereinigt haben und so zur Bildung eines grossen Sees zwischen der Ostkùste Englands und den Niederlanden gefùhrt haben. Man nimmt allgemein an, dass der Ùberlauf von diesem See die erste Bresche im Weald-Artois-Kamm verursachte und so zur Bildung der Meerenge von Dover fùhrte. Vor der Vereisung floss die Themse gemeinsam mit den vom Kontinent kommenden Flùssen (einschliesslich Rhein und Maas) in das Nordseebecken. Nach dem Ùberlauf des Sees scheint es, dass dièse Flùsse zusammen sùdwârts in den Àrmelkanal abflossen. Ob dièse Entwàsserungsroute nach Sùden in alien spâteren Perioden mit niedrigem Meeresspiegelniveau beibehalten wurde, bleibt zu erforschen. Doch scheint es sicher, dass dies der Fall in der letzten Eiszeit war

Extending the range of optically stimulated luminescence using vein quartz and quartzite sedimentary pebbles

The feasibility of applying optically stimulated luminescence (OSL) techniques to obtain estimates of the burial age of lithic clasts in the form of pebbles of quartzose lithology is investigated in this study. We applied OSL measurement procedures to vein-quartz and quartzite pebbles from contexts at five sites with fluvial and coastal beach contexts of depositional age ranging from 500 ka to the mid Holocene. As in previous OSL studies with lithics, measured depth-dose profiles were interpreted to identify regions associated with key stages in the burial history of the pebbles, including the extent of pre-burial optical resetting, primary burial and any subsequent secondary stages of exposure to sunlight. While some of the pebbles had not been fully optically reset before burial, none were in field saturation, as commonly encountered with larger lithic clasts such as cobbles. The relatively low concentrations of radionuclides within vein-quartz and quartzite pebbles simplified the assessment of the radiation dose rate. OSL age estimates consistent with independent dating evidence were obtained for the three sites sampled in the UK (Langford Quarry, Leet Hill Quarry, Swanscombe Skull Site and Barnfield Pit) and one of two sites tested in Portugal (Forte Cão), whereas evidence of secondary optical bleaching detected in pebbles from a second site (Vale de Atela) underestimated the independent age for primary burial. The oldest depositional age of the contexts tested was ∼500 ka (Leet Hill Quarry), and for some of the pebbles tested there was the capacity to extend the potential dating range further as the age equivalence of the limiting value of De was in excess of 1 Ma. The advantages of working with smaller, portable, clasts in the form of pebbles and with a lithology of higher transparency opens up a wide range of potential applications, whether the depositional processes are environmental or anthropogenic in origin or modification

Terrace reconstruction and long profile projection: a case study from the Solent river system near Southampton, England

River terrace sequences are important frameworks for archaeological evidence and as such it is important to produce robust correlations between what are often fragmentary remnants of ancient terraces. This paper examines both conceptual and practical issues related to such correlations, using a case study from the eastern part of the former Solent River system near Southampton, England. In this region two recent terrace schemes have been constructed using different data to describe the terrace deposits: one based mainly on terrace surfaces; the other on gravel thicknesses, often not recording the terrace surface itself. The utility of each of these types of data in terrace correlation is discussed in relation to the complexity of the record, the probability of post-depositional alteration of surface sediments and comparison of straight-line projections with modern river long profiles. Correlation using age estimates is also discussed, in relation to optically-stimulated luminescence dating of sand lenses within terrace gravels in this region during the PASHCC project. It is concluded that the need for replication at single sites means that this approach has limited use for correlative purposes, although dating of sediments is important for understanding wider landscape evolution and patterns of human occupation

Drainage evolution in the Polish Sudeten Foreland in the context of European fluvial archives

Detailed study of subsurface deposits in the Polish Sudeten Foreland, particularly with reference to provenance data, has revealed that an extensive preglacial drainage system developed there in the Pliocene–Early Pleistocene, with both similarities and differences in comparison with the present-day Odra (Oder) system. This foreland is at the northern edge of an intensely deformed upland, metamorphosed during the Variscan orogeny, with faulted horsts and grabens reactivated in the Late Cenozoic. The main arm of preglacial drainage of this area, at least until the early Middle Pleistocene, was the Palaeo–Nysa Kłodzka, precursor of the Odra left-bank tributary of that name. Significant preglacial evolution of this drainage system can be demonstrated, including incision into the landscape, prior to its disruption by glaciation in the Elsterian (Sanian) and again in the early Saalian (Odranian), which resulted in burial of the preglacial fluvial archives by glacial and fluvioglacial deposits. No later ice sheets reached the area, in which the modern drainage pattern became established, the rivers incising afresh into the landscape and forming post-Saalian terrace systems. Issues of compatibility of this record with the progressive uplift implicit in the formation of conventional terrace systems are examined, with particular reference to crustal properties, which are shown to have had an important influence on landscape and drainage evolution in the region

The Quaternary sequence of the Nahr el Kebir, NW Syria: An important repository for evidence of Palaeolithic occupation and landscape evolution in the eastern Mediterranean

The third largest river in Syria, the Nahr el Kebir has a well-preserved record of river-terrace deposits that have produced substantial Palaeolithic artefact assemblages both from within the terrace deposits and from the land surfaces above and around them. At the Mediterranean coastline, the fluvial gravels interdigitate with raised shoreline terrace deposits, providing an insight into the temporal and climatic relations of both of these important geomorphological and morphostratigraphical archives, as well as their relationship with each other. New research is reported here on the Pleistocene geology and geomorphology of the Nahr el Kebir and the associated Palaeolithic archaeology, the latter having been reinterpreted based on reassessment of museum collections arising from earlier detailed work. Field visits revealed an additional, hitherto unrecognized low-level river terrace, whereas one of the previously recognized Palaeolithic levels can be shown to coincide with slope deposits that armour hilltops rather than representing a genuine fluvial formation. The new understanding of these geomorphological and sedimentary archives supports ideas that this corner of the Mediterranean has experienced unusually rapid uplift during the recent Quaternary, as a result of which the local rivers, including the Kebir, have deepened their valleys rapidly. Consequently, only the recent part of the Quaternary is recorded in the Kebir system and the ages envisaged previously for the terrace deposits and the Palaeolithic artefact assemblages were considerable overestimates in many cases, a finding that has significance for their correlation with those from the wider region. Reassessment of the Palaeolithic archaeology suggests a settlement history initially dominated by groups using handaxes, alongside simple core working (0.5–0.3 Ma), followed by a major change with the appearance of Levallois core working alongside handaxes, marking the transition to the early Middle Palaeolithic

Location of the River Euphrates in the Late Miocene; dating of terrace gravel at Shireen, Syria

International audienceWe report gravel of the River Euphrates, capped by basalt that is Ar-Ar dated to ~9 Ma, at Shireen in northern Syria. This gravel, preserved by the erosion-resistant basalt, allows us for the first time to reconstruct the history of this major river during the Late Miocene. In response to progressive regional surface uplift, the Euphrates extended SE by ~800 km between the early Middle Miocene, when the coast was near Kahramanmara? in southern Turkey, and the Pliocene, when it lay in western Iraq, east of the Arabian Platform uplands

Terrestrial implications for the maritime geoarchaeological resource: A view from the Lower Palaeolithic

Stone tools and faunal remains have been recovered from the English Channel and the North Sea through trawling, dredging for aggregates, channel clearance, and coring. These finds highlight the potential for a maritime Lower Palaeolithic archaeological resource. It is proposed here that any Lower Palaeolithic artefacts, faunal remains, and sediments deposited in the maritime zone during dry, low-stand phases were once (and may still be) contextually similar to their counterparts in the terrestrial Lower Palaeolithic records of north-western Europe. Given these similarities, can interpretive models and analytical frameworks developed for terrestrial archaeology be profitably applied to an assessment of the potential value of any maritime resource? The terrestrial geoarchaeological resource for the Lower Palaeolithic is dominated by artefacts and ecofacts that have been fluvially reworked. The spatio-temporal resolution of these data varies from entire river valleys and marine isotope stages to river channel gravel bar surfaces and decadal timescales, thus supporting a variety of questions and approaches. However, the structure of the terrestrial resource also highlights two fundamental limitations in current maritime knowledge that can restrict the application of terrestrial approaches to any potential maritime resource: (i) how have the repetitive transgressions and regressions of the Middle and Late Pleistocene modified the terrace landforms and sediments associated with the river systems of the English Channel and southern North Sea basins?; and (ii) do the surviving submerged terrace landforms and fluvial sedimentary deposits support robust geochronological models, as is the case with the classical terrestrial terrace sequences? This paper highlights potential approaches to these questions, and concludes that the fluvial palaeogeography, Pleistocene fossils, and potential Lower Palaeolithic artefacts of the maritime geoarchaeological resource can be profitably investigated in future as derived, low-resolution data sets, facilitating questions of colonisation, occupation, demography, and material culture

Improved protein structure prediction using potentials from deep learning

Protein structure prediction can be used to determine the three-dimensional shape of a protein from its amino acid sequence1. This problem is of fundamental importance as the structure of a protein largely determines its function2; however, protein structures can be difficult to determine experimentally. Considerable progress has recently been made by leveraging genetic information. It is possible to infer which amino acid residues are in contact by analysing covariation in homologous sequences, which aids in the prediction of protein structures3. Here we show that we can train a neural network to make accurate predictions of the distances between pairs of residues, which convey more information about the structure than contact predictions. Using this information, we construct a potential of mean force4 that can accurately describe the shape of a protein. We find that the resulting potential can be optimized by a simple gradient descent algorithm to generate structures without complex sampling procedures. The resulting system, named AlphaFold, achieves high accuracy, even for sequences with fewer homologous sequences. In the recent Critical Assessment of Protein Structure Prediction5 (CASP13)—a blind assessment of the state of the field—AlphaFold created high-accuracy structures (with template modelling (TM) scores6 of 0.7 or higher) for 24 out of 43 free modelling domains, whereas the next best method, which used sampling and contact information, achieved such accuracy for only 14 out of 43 domains. AlphaFold represents a considerable advance in protein-structure prediction. We expect this increased accuracy to enable insights into the function and malfunction of proteins, especially in cases for which no structures for homologous proteins have been experimentally determined7

Protein structure prediction using multiple deep neural networks in the 13th Critical Assessment of Protein Structure Prediction (CASP13)

We describe AlphaFold, the protein structure prediction system that was entered by the group A7D in CASP13 Submissions were made by three free-modelling methods which combine the predictions of three neural networks. All three systems were guided by predictions of distances between pairs of residues produced by a neural network. Two systems assembled fragments produced by a generative neural network, one using scores from a network trained to regress GDT_TS. The third system shows that simple gradient descent on a properly constructed potential is able to perform on-par with more expensive traditional search techniques and without requiring domain segmentation. In the CASP13 free-modelling assessors' ranking by summed z-scores, this system scored highest with 68.3 vs 48.2 for the next closest group. (An average GDT_TS of 61.4.) The system produced high-accuracy structures (with GDT_TS scores of 70 or higher) for 11 out of 43 free-modelling domains. Despite not explicitly using template information, the results in the template category were comparable to the best performing template-based methods