81 research outputs found

    Direct numerical simulations of vortex rings at ReΓ = 7500

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    We present direct numerical simulations of the turbulent decay of vortex rings with ReΓ = 7500. We analyse the vortex dynamics during the nonlinear stage of the instability along with the structure of the vortex wake during the turbulent stage. These simulations enable the quantification of vorticity dynamics and their correlation with structures from dye visualization and the observations of circulation decay that have been reported in related experimental works. Movies are available with the online version of the paper

    Direct numerical simulations of vortex rings at ReΓ: 7500

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    We present direct numerical simulations of the turbulent decay of vortex rings with ReΓ = 7500. We analyse the vortex dynamics during the nonlinear stage of the instability along with the structure of the vortex wake during the turbulent stage. These simulations enable the quantification of vorticity dynamics and their correlation with structures from dye visualization and the observations of circulation decay that have been reported in related experimental works. Movies are available with the online version of the pape

    A Lagrangian particle method for reaction-diffusion systems on deforming surfaces

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    Reaction-diffusion processes on complex deforming surfaces are fundamental to a number of biological processes ranging from embryonic development to cancer tumor growth and angiogenesis. The simulation of these processes using continuum reaction-diffusion models requires computational methods capable of accurately tracking the geometric deformations and discretizing on them the governing equations. We employ a Lagrangian level-set formulation to capture the deformation of the geometry and use an embedding formulation and an adaptive particle method to discretize both the level-set equations and the corresponding reaction-diffusion. We validate the proposed method and discuss its advantages and drawbacks through simulations of reaction-diffusion equations on complex and deforming geometrie

    Direct numerical simulations of vortex rings at Re

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    Benchmark Chemical Systems and Simulation Parameters

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    Performance results were measured for two chemical systems that are commonly used for MD code benchmarking, and one additional system that is characteristic for free energy perturbation (FEP) simulations

    Yukawa potentials in systems with partial periodic boundary conditions I : Ewald sums for quasi-two dimensional systems

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    Yukawa potentials are often used as effective potentials for systems as colloids, plasmas, etc. When the Debye screening length is large, the Yukawa potential tends to the non-screened Coulomb potential ; in this small screening limit, or Coulomb limit, the potential is long ranged. As it is well known in computer simulation, a simple truncation of the long ranged potential and the minimum image convention are insufficient to obtain accurate numerical data on systems. The Ewald method for bulk systems, i.e. with periodic boundary conditions in all three directions of the space, has already been derived for Yukawa potential [cf. Y., Rosenfeld, {\it Mol. Phys.}, \bm{88}, 1357, (1996) and G., Salin and J.-M., Caillol, {\it J. Chem. Phys.}, \bm{113}, 10459, (2000)], but for systems with partial periodic boundary conditions, the Ewald sums have only recently been obtained [M., Mazars, {\it J. Chem. Phys.}, {\bf 126}, 056101 (2007)]. In this paper, we provide a closed derivation of the Ewald sums for Yukawa potentials in systems with periodic boundary conditions in only two directions and for any value of the Debye length. A special attention is paid to the Coulomb limit and its relation with the electroneutrality of systems.Comment: 40 pages, 5 figures and 4 table

    Accelerating electrostatic pair methods on graphical processing units to study molecules in supercritical carbon dioxide

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    Traditionally, electrostatic interactions are modelled using Ewald techniques, which provide a good approximation, but are poorly suited to GPU architectures. We use the GPU versions of the LAMMPS MD package to implement and assess the Wolf summation method. We compute transport and structural properties of pure carbon dioxide and mixtures of carbon dioxide with either methane or difluoromethane. The diffusion of pure carbon dioxide is indistinguishable when using the Wolf summation method instead of PPPM on GPUs. The optimum value of the potential damping parameter, α, is 0.075. We observe a decrease in accuracy when the system polarity increases, yet the method is robust for mildly polar systems. We anticipate the method can be used for a number of techniques, and applied to a variety of systems. Substitution of PPPM can yield a two-fold decrease in the wall-clock time

    Structural Anisotropy in Polar Fluids Subjected to Periodic Boundary Conditions

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    A heuristic model based on dielectric continuum theory for the long-range solvation free energy of a dipolar system possessing periodic boundary conditions (PBCs) is presented. The predictions of the model are compared to simulation results for Stockmayer fluids simulated using three different cell geometries. The boundary effects induced by the PBCs are shown to lead to anisotropies in the apparent dielectric constant and the long-range solvation free energy of as much as 50%. However, the sum of all of the anisotropic energy contributions yields a value that is very close to the isotropic one derived from dielectric continuum theory, leading to a total system energy close to the dielectric value. It is finally shown that the leading-order contribution to the energetic and structural anisotropy is significantly smaller in the noncubic simulation cell geometries compared to when using a cubic simulation cell

    Untapped Resources Problems and Possibilities Pertaining to Meaningful Youth Participation

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    Within traditional political and social arenas the voice of young people is rarely heard and taken into meaningful consideration. The world has dramatically changed and is constantly changing yet our system of political participation has remained virtually the same for more than a century. To better meet the demands of a true democratic society, new methods and mechanisms need to be developed to better incorporate the voices of all citizens. Young people, especially, posses unique viewpoints, characteristics and abilities that should be utilised within the realms of power. Young people should be viewed as partners and solutions rather than problems that need to be treated. Through theories of social representation, power and empowerment this study examines explanations and remedies for the current state of youth representation. The empirical basis that this study is founded upon consists of six qualitative interviews as well as a sampling of international laws and agreements concerning youth participation. I also present specifically a youth-run NGO as a best-practice example of how young people can become involved and participate meaningfully in political and civil decision-making processes
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