Towards a grapho-phonologically parsed corpus of medieval Scots:Database design and technical solutions

This paper presents a newly constructed corpus of sound-to-spelling mappings in medieval Scots, which stems from the work of the From Inglis to Scots (FITS) project. We have developed a systematic approach to the relationships between individual spellings and proposed sound values, and recorded these mutual links in a relational database. In this paper, we introduce the theoretical underpinnings of sound-to-spelling and spelling-to-sound mappings, and show how a Scots root morpheme undergoes grapho-phonological parsing, the analytical procedure that is employed to break down spelling sequences into sound units. We explain the data collection and annotation for the FITS Corpus (Alcorn et al., forthcoming), drawing attention to the extensive meta-data which accompany each analysed unit of spelling and sound. The database records grammatical and lexical information about the root, the positional arrangement of segments within the root, labels for the nuclei, vowels and consonants, the morphological context, and extra-linguistic detail of the text a given root was taken from (date, place and text type). With this wealth of information, the FITS corpus is capable of answering complex queries about the sound and spelling systems of medieval Scots. We also suggest how our methodology can be transferred to other non-standardised spelling systems

Population, behavioural and environmental drivers of malaria prevalence in the Democratic Republic of Congo

<p>Abstract</p> <p>Background</p> <p>Malaria is highly endemic in the Democratic Republic of Congo (DRC), but the limits and intensity of transmission within the country are unknown. It is important to discern these patterns as well as the drivers which may underlie them in order for effective prevention measures to be carried out.</p> <p>Methods</p> <p>By applying high-throughput PCR analyses on leftover dried blood spots from the 2007 Demographic and Health Survey (DHS) for the DRC, prevalence estimates were generated and ecological drivers of malaria were explored using spatial statistical analyses and multilevel modelling.</p> <p>Results</p> <p>Of the 7,746 respondents, 2268 (29.3%) were parasitaemic; prevalence ranged from 0-82% within geographically-defined survey clusters. Regional variation in these rates was mapped using the inverse-distance weighting spatial interpolation technique. Males were more likely to be parasitaemic than older people or females (p < 0.0001), while wealthier people were at a lower risk (p < 0.001). Increased community use of bed nets (p = 0.001) and community wealth (p < 0.05) were protective against malaria at the community level but not at the individual level. Paradoxically, the number of battle events since 1994 surrounding one's community was negatively associated with malaria risk (p < 0.0001).</p> <p>Conclusions</p> <p>This research demonstrates the feasibility of using population-based behavioural and molecular surveillance in conjunction with DHS data and geographic methods to study endemic infectious diseases. This study provides the most accurate population-based estimates to date of where illness from malaria occurs in the DRC and what factors contribute to the estimated spatial patterns. This study suggests that spatial information and analyses can enable the DRC government to focus its control efforts against malaria.</p

A short history of the 5-HT2C receptor: from the choroid plexus to depression, obesity and addiction treatment

This paper is a personal account on the discovery and characterization of the 5-HT2C receptor (first known as the 5- HT1C receptor) over 30 years ago and how it translated into a number of unsuspected features for a G protein-coupled receptor (GPCR) and a diversity of clinical applications. The 5-HT2C receptor is one of the most intriguing members of the GPCR superfamily. Initially referred to as 5-HT1CR, the 5-HT2CR was discovered while studying the pharmacological features and the distribution of [3H]mesulergine-labelled sites, primarily in the brain using radioligand binding and slice autoradiography. Mesulergine (SDZ CU-085), was, at the time, best defined as a ligand with serotonergic and dopaminergic properties. Autoradiographic studies showed remarkably strong [3H]mesulergine-labelling to the rat choroid plexus. [3H]mesulergine-labelled sites had pharmacological properties different from, at the time, known or purported 5-HT receptors. In spite of similarities with 5-HT2 binding, the new binding site was called 5-HT1C because of its very high affinity for 5-HT itself. Within the following 10 years, the 5-HT1CR (later named 5- HT2C) was extensively characterised pharmacologically, anatomically and functionally: it was one of the first 5-HT receptors to be sequenced and cloned. The 5-HT2CR is a GPCR, with a very complex gene structure. It constitutes a rarity in theGPCR family: many 5-HT2CR variants exist, especially in humans, due to RNA editing, in addition to a few 5-HT2CR splice variants. Intense research led to therapeutically active 5-HT2C receptor ligands, both antagonists (or inverse agonists) and agonists: keeping in mind that a number of antidepressants and antipsychotics are 5- HT2CR antagonists/inverse agonists. Agomelatine, a 5-HT2CR antagonist is registered for the treatment of major depression. The agonist Lorcaserin is registered for the treatment of aspects of obesity and has further potential in addiction, especially nicotine/ smoking. There is good evidence that the 5-HT2CR is involved in spinal cord injury-induced spasms of the lower limbs, which can be treated with 5-HT2CR antagonists/inverse agonists such as cyproheptadine or SB206553. The 5-HT2CR may play a role in schizophrenia and epilepsy. Vabicaserin, a 5-HT2CR agonist has been in development for the treatment of schizophrenia and obesity, but was stopped. As is common, there is potential for further indications for 5-HT2CR ligands, as suggested by a number of preclinical and/or genome-wide association studies (GWAS) on depression, suicide, sexual dysfunction, addictions and obesity. The 5-HT2CR is clearly affected by a number of established antidepressants/antipsychotics and may be one of the culprits in antipsychotic-induced weight gain

Synchronic and diachronic morphoprosody : evidence from Mapudungun and Early English

In the individual grammars of time-bound speakers, as well as in the historical transmission of a language, prosodic and morphological domains are forced to interact. This research focuses, in particular, on stress, and its instantiation in different domains of the morphological structure. It asks what factors are involved in prioritising one system – morphology or stress assignment – over the other and how radical the consequences of this may be on the overall structure of the language. The data comes from two typologically distinct languages: Mapudungun (previously 'Araucanian'), a polysynthetic and agglutinating language isolate from Chile and Argentina documented for over 400 years; and English, far further into the isolating and fusional spectra, and documented from the 7th century onwards. In both languages, we focus on morphologically complex words and how they evolve in relation to stress. In Mapudungun we examine the entire historical period, while in English we focus on the changes from Old to Middle English (8th -14th centuries). The analyses show how different types of data (from acoustics, to native and non-native intuitions; from historical corpora, to present-day experimentation techniques), can be used in order to assess whether the prosodic system will accommodate to the demarcation of morphological domains or whether morphological structure is to be shoehorned into the prosodic system's rhythmic pattern. Original contemporary field and experimental work on Mapudungun shows stress to fall on right-aligned moraic trochees in the stem and word domains. This contradicts claims in the foot-typology literature, where Araucanian stress goes from left to right, building quantity-insensitive iambs. A reconstruction of the history of the stress system suggests a transition from quantity insensitivity to sensitivity and the establishment of two domains of stress, which ultimately facilitates the parsing of word-internal structure, emphasising the demarcative function of stress. In the case of Early English, the focus is on the prefixal domain. Here the optimisation of the stress system – also trochaic – is shown to reduce the instances of clash in the language at large. As a result, a split in the prefixal system is identified, where prefixes constituting heavy, non-branching feet are avoided – and are ultimately lost – due to clash with root-initial stress, while light and branching feet remain in the language. In this case, it is the rhythmic or structural role of stress that is emphasised. Language internal factors are evaluated – in particular morphological type and stress properties – alongside external factors such as contact (with Chilean Spanish and Norman French), in order to provide a more general context for the observed changes and synchronic structure of the languages. A key concept in the analysis is that of 'pertinacity', the conservative nature of transmission in grammars, which leads learners to perpetuate perceived core elements of the system.</p