Female reproductive characteristics of the Horvath's rock lizard (Iberolacerta horvathi) from Slovenia

In this paper, we present data on the female reproductive traits of the Horvath’s rock lizard from Slovenia. The clutch, egg and hatchling characteristics were investigated based on clutches laid in laboratory conditions by pregnant females collected from a natural population. A female lays one clutch of eggs annually with an average number of three (range 1-5) eggs. We found a significant positive correlation between female size and egg width and volume. The mean egg length and volume in a clutch decreased significantly with clutch size independently of female size. The incubation period averaged 44 days. Significant positive correlations were found between the hatchling total length and mass, and egg mass. There was a significant negative relationship between the egg mass and incubation duration. The life-history strategy of the Horvath’s rock lizard appeared to be shaped by several factors, such as the constraints of a high-altitude environment, flattened body morphology and possibly phylogenetic background.Projekat ministarstva br. 17304

Occurence of common dolphins (Delphinus delphis) in the Gulf of Trieste and the northern Adriatic Sea

1. The Mediterranean common dolphin (Delphinus delphis), considered to have been very common in the past, had undergone a dramatic decline across most of the basin by the end of 1970s. In the northern Adriatic Sea, one of the regions with most available historical information, the common dolphin is thought to have been the most common and abundant cetacean throughout most of the 20th century. However, by the end of 1970s, it had virtually disappeared from the region and is now considered generally absent from the entire Adriatic Sea. 2. This contribution summarizes the occurrence of common dolphins in the Gulf of Trieste and provides a brief review of published records in other parts of the Adriatic Sea. 3. Systematic boat surveys in the wider area of the Gulf of Trieste between 2002 and 2019 confirmed that the common bottlenose dolphin (Tursiops truncatus) is the only regularly occurring cetacean species in this area. Despite this, several records of common dolphins were documented in the Gulf of Trieste between 2009 and 2012, through sightings of live animals or recovery of dead stranded animals. 4. Dorsal fin markings allowed the photo‐identification of some of these, suggesting that at least four different live individuals (three adults and one calf) occurred here in recent times. Most cases involved single adult individuals, but one included a mother‐calf pair that was temporarily resident in a port for several months, a behaviour atypical for this species. Photo‐identification showed that the presumed mother had previously been sighted in the Ionian Sea in Greece, over 1,000 km from the Gulf of Trieste, making this the longest documented movement for this species worldwide. 5. At present, the common dolphin continues to be rare in the region.Publisher PDFPeer reviewe

Phylogeographic structure of the pygmy shrew: revisiting the roles of southern and northern refugia in Europe

Southern and northern glacial refugia are considered paradigms that explain the complex phylogeographic patterns and processes of European biota. Here, we provide a revisited statistical phylogeographic analysis of the pygmy shrew Sorex minutus Linnaeus, 1766 (Eulipotyphla, Soricidae) examining the genetic diversity, genetic differentiation and demographic history in the Mediterranean peninsulas and in Western and Central Europe. The results showed support for genetically distinct and diverse phylogeographic groups consistent with southern and northern glacial refugia, as expected from previous studies, but also identified geographical barriers concordant with glaciated mountain ranges during the Last Glacial Maximum (LGM), early diversification events dated between the Upper Pleistocene and Lower Holocene for the main phylogeographic groups, and recent (post-LGM) patterns of demographic expansions. This study is the most comprehensive investigation of this species to date, and the results have implications for the conservation of intraspecific diversity and the preservation of the evolutionary potential of S. minutus

Female reproductive characteristics of the Horvath's rock lizard (Iberolacerta horvathi) from Slovenia

In this paper, we present data on the female reproductive traits of the Horvath’s rock lizard from Slovenia. The clutch, egg and hatchling characteristics were investigated based on clutches laid in laboratory conditions by pregnant females collected from a natural population. A female lays one clutch of eggs annually with an average number of three (range 1-5) eggs. We found a significant positive correlation between female size and egg width and volume. The mean egg length and volume in a clutch decreased significantly with clutch size independently of female size. The incubation period averaged 44 days. Significant positive correlations were found between the hatchling total length and mass, and egg mass. There was a significant negative relationship between the egg mass and incubation duration. The life-history strategy of the Horvath’s rock lizard appeared to be shaped by several factors, such as the constraints of a high-altitude environment, flattened body morphology and possibly phylogenetic background.Projekat ministarstva br. 17304

Phylogeographical structure of the pygmy shrew : revisiting the roles of southern and northern refugia in Europe

Southern and northern glacial refugia are considered paradigms that explain the complex phylogeographical patterns and processes of European biota. Here, we provide a revisited statistical phylogeographical analysis of the pygmy shrew Sorex minutus Linnaeus, 1766 (Eulipotyphla, Soricidae), examining its genetic diversity, genetic differentiation and demographic history in the Mediterranean peninsulas and in Western and Central Europe. The results showed support for genetically distinct and diverse phylogeographical groups consistent with southern and northern glacial refugia, as expected from previous studies. We also identified geographical barriers concordant with glaciated mountain ranges during the Last Glacial Maximum (LGM), early diversification events dated between the Late Pleistocene and Early Holocene for the main phylogeographical groups, and recent (post-LGM) patterns of demographic expansions. This study is the most comprehensive investigation of this species to date, and the results have implications for the conservation of intraspecific diversity and the preservation of the evolutionary potential of S. minutus

Ecogeographical patterns of morphological variation in pygmy shrews Sorex minutus (Soricomorpha: Soricinae) within a phylogeographic and continental-and-island framework

Ecogeographical patterns of morphological variation were studied in the Eurasian pygmy shrew Sorex minutus to understand the species’ morphological diversity in a continental and island setting, and within the context of previous detailed phylogeographic studies. In total, 568 mandibles and 377 skulls of S. minutus from continental and island populations from Europe and Atlantic islands were examined using a geometric morphometrics approach, and the general relationships of mandible and skull size and shape with geographical and environmental variables was studied. Samples were then pooled into predefined geographical groups to evaluate the morphological differences among them using analyses of variance, to contrast the morphological and genetic relationships based on morphological and genetic distances and ancestral state reconstructions, and to assess the correlations of morphological, genetic and geographic distances with Mantel tests. We found significant relationships of mandible size with geographic and environmental variables, fitting the converse Bergmann’s rule; however, for skull size this was less evident. Continental groups of S. minutus could not readily be differentiated from each other by shape. Most island groups of S. minutus were easily discriminated from the continental groups by being larger, indicative of an island effect. Moreover, morphological and genetic distances differed substantially, and again island groups were distinctive morphologically. Morphological and geographical distances were significantly correlated, but not so the morphological and genetic distances indicating that morphological variation does not reflect genetic subdivision in S. minutus. Our analyses showed that environmental variables and insularity had important effects on the morphological differentiation of S. minutus

Genetic differentiation of European grayling (Thymallus thymallus) populations in Serbia, based on mitochondrial and nuclear DNA analyses

<p>Abstract</p> <p>Background</p> <p>The structure and diversity of grayling (<it>Thymallus thymallus</it>) populations have been well studied in most of its native habitat; however the southernmost populations of the Balkan Peninsula remain largely unexplored. The purpose of this study was to assess the genetic diversity of Serbian grayling populations, detect the impact of stocking and provide guidelines for conservation and management.</p> <p>Methods</p> <p>Eighty grayling individuals were collected from four rivers (Ibar, Lim, Drina and Rzav). The mitochondrial DNA control region (CR; 595 bp of the 3'end and 74 bp of flanking tRNA) and the ATP6 gene (630 bp fragment) were sequenced for 20 individuals (five from each locality). In addition, all individuals were genotyped with 12 microsatellite loci. The diversity and structure of the populations as well as the recent and ancient population declines were studied using specialized software.</p> <p>Results</p> <p>We detected three new haplotypes in the mtDNA CR and four haplotypes in the ATP6 gene of which three had not been described before. Previously, one CR haplotype and two ATP6 gene haplotypes had been identified as allochthonous, originating from Slovenia. Reconstruction of phylogenetic relations placed the remaining two CR haplotypes from the River Danube drainage of Serbia into a new clade, which is related to the previously described sister Slovenian clade. These two clades form a new Balkan clade. Microsatellite marker analysis showed that all four populations are genetically distinct from each other without any sign of intra-population structure, although stocking of the most diverse population (Drina River) was confirmed by mtDNA analysis. Recent and historical population declines of Serbian grayling do not differ from those of other European populations.</p> <p>Conclusions</p> <p>Our study shows that (1) the Ibar, Lim and Drina Rivers grayling populations are genetically distinct from populations outside of Serbia and thus should be managed as native populations in spite of some introgression in the Drina River population and (2) the Rzav River population is not appropriate for further stocking activities since it originates from stocked Slovenian grayling. However, the Rzav River population does not represent an immediate danger to other populations because it is physically isolated from these.</p

Is Evolution of Blind Mole Rats Determined by Climate Oscillations?

The concept of climate variability facilitating adaptive radiation supported by the ‘‘Court Jester’’ hypothesis is disputed by the ‘‘Red Queen’’ one, but the prevalence of one or the other might be scale-dependent. We report on a detailed, comprehensive phylo-geographic study on the ,4 kb mtDNA sequence in underground blind mole rats of the family Spalacidae (or subfamily Spalacinae) from the East Mediterranean steppes. Our study aimed at testing the presence of periodicities in branching patterns on a constructed phylogenetic tree and at searching for congruence between branching events, tectonic history and paleoclimates. In contrast to the strong support for the majority of the branching events on the tree, the absence of support in a few instances indicates that network-like evolution could exist in spalacids. In our tree, robust support was given, in concordance with paleontological data, for the separation of spalacids from muroid rodents during the first half of the Miocene when open, grass-dominated habitats were established. Marine barriers formed between Anatolia and the Balkans could have facilitated the separation of the lineage ‘‘Spalax’’ from the lineage ‘‘Nannospalax’’ and of the clade ‘‘leucodon’’ from the clade ‘‘xanthodon’’. The separation of the clade ‘‘ehrenbergi’’ occurred during the late stages of the tectonically induced uplift of the Anatolian high plateaus and mountains, whereas the separation of the clade ‘‘vasvarii’’ took place when the rapidly uplifting Taurus mountain range prevented the Mediterranean rainfalls from reaching the Central Anatolian Plateau. The separation of Spalax antiquus and S. graecus occurred when the southeastern Carpathians were uplifted. Despite the role played by tectonic events, branching events that show periodicity corresponding to 400-kyr and 100-kyr eccentricity bands illuminate the important role of orbital fluctuations on adaptive radiation in spalacids. At the given scale, our results supports the ‘‘Court Jester’’ hypothesis over the ‘‘Red Queen’’ one

Phylogeography of the South China Field Mouse (Apodemus draco) on the Southeastern Tibetan Plateau Reveals High Genetic Diversity and Glacial Refugia

The southeastern margin of the Tibetan Plateau (SEMTP) is a particularly interesting region due to its topographic complexity and unique geologic history, but phylogeographic studies that focus on this region are rare. In this study, we investigated the phylogeography of the South China field mouse, Apodemus draco, in order to assess the role of geologic and climatic events on the Tibetan Plateau in shaping its genetic structure. We sequenced mitochondrial cytochrome b (cyt b) sequences in 103 individuals from 47 sampling sites. In addition, 23 cyt b sequences were collected from GenBank for analyses. Phylogenetic, demographic and landscape genetic methods were conducted. Seventy-six cyt b haplotypes were found and the genetic diversity was extremely high (π = 0.0368; h = 0.989). Five major evolutionary clades, based on geographic locations, were identified. Demographic analyses implied subclade 1A and subclade 1B experienced population expansions at about 0.052-0.013 Mya and 0.014-0.004 Mya, respectively. The divergence time analysis showed that the split between clade 1 and clade 2 occurred 0.26 Mya, which fell into the extensive glacial period (EGP, 0.5-0.17 Mya). The divergence times of other main clades (2.20-0.55 Mya) were congruent with the periods of the Qingzang Movement (3.6-1.7 Mya) and the Kun-Huang Movement (1.2-0.6 Mya), which were known as the most intense uplift events in the Tibetan Plateau. Our study supported the hypothesis that the SEMTP was a large late Pleistocene refugium, and further inferred that the Gongga Mountain Region and Hongya County were glacial refugia for A. draco in clade 1. We hypothesize that the evolutionary history of A. draco in the SEMTP primarily occurred in two stages. First, an initial divergence would have been shaped by uplift events of the Tibetan Plateau. Then, major glaciations in the Pleistocene added complexity to its demographic history and genetic structure