677 research outputs found

    Responsible Data Governance of Neuroscience Big Data

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    Open access article.Current discussions of the ethical aspects of big data are shaped by concerns regarding the social consequences of both the widespread adoption of machine learning and the ways in which biases in data can be replicated and perpetuated. We instead focus here on the ethical issues arising from the use of big data in international neuroscience collaborations. Neuroscience innovation relies upon neuroinformatics, large-scale data collection and analysis enabled by novel and emergent technologies. Each step of this work involves aspects of ethics, ranging from concerns for adherence to informed consent or animal protection principles and issues of data re-use at the stage of data collection, to data protection and privacy during data processing and analysis, and issues of attribution and intellectual property at the data-sharing and publication stages. Significant dilemmas and challenges with far-reaching implications are also inherent, including reconciling the ethical imperative for openness and validation with data protection compliance and considering future innovation trajectories or the potential for misuse of research results. Furthermore, these issues are subject to local interpretations within different ethical cultures applying diverse legal systems emphasising different aspects. Neuroscience big data require a concerted approach to research across boundaries, wherein ethical aspects are integrated within a transparent, dialogical data governance process. We address this by developing the concept of “responsible data governance,” applying the principles of Responsible Research and Innovation (RRI) to the challenges presented by the governance of neuroscience big data in the Human Brain Project (HBP)

    Beyond Research Ethics: Dialogues in Neuro-ICT Research

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    open access articleThe increasing use of information and communication technologies (ICTs) to help facilitate neuroscience adds a new level of complexity to the question of how ethical issues of such research can be identified and addressed. Current research ethics practice, based on ethics reviews by institutional review boards (IRB) and underpinned by ethical principlism, has been widely criticized. In this article, we develop an alternative way of approaching ethics in neuro-ICT research, based on discourse ethics, which implements Responsible Research and Innovation (RRI) through dialogues. We draw on our work in Ethics Support, using the Human Brain Project (HBP) as empirical evidence of the viability of this approach

    Control Of Norway Rats In Sewer And Utility Systems Using Pulsed Baiting Methods

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    There were 1,288 sewer and 235 other utility manholes baited to control Norway rat (Rattus norvegicus) populations in downtown Boston using pulsed-baiting methods. About 15% of all sewer, 18% of phone, and 26% of electric manholes had rat activity. Sewer populations were most associated with residential areas with low flow, small diameter (\u3c61 cm) brick sewers; in those circumstances, up to 38% of manholes had rat activity. Bait consumption in sewers (high risk areas) was 91 % below baseline, five months after the fourth baiting period. Bait consumption and the number of active sewer holes were 96% and 87% below baseline, respectively, when seasonal maintenance baiting was last initiated. Reinfestation of phone/electric manholes was so minimal that maintenance baiting was not necessary or cost-effective. Subsurface baiting should be an integral part of urban rodent control programs

    The revised EIA Directive – possible implications for practice in England

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    Whilst environmental impact assessment (EIA) in England overall can be said to be of a good to satisfactory quality, we believe that the revised EIA Directive will be able to strengthen it further by addressing gaps with regards to the consideration of alternatives, climate change mitigation and adaptation, the consideration of accidents and disasters along with human health, land and biodiversity. Some challenges, however, are likely to remain, for example, with regards to penalties for non-compliance and a scoping stage that will remain optional. The biggest unknown at the time of writing this article however is whether or not the UK will remain in the EU, giving rise to some considerable uncertainties

    Accompanying technology development in the Human Brain Project:From foresight to ethics management

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    This paper addresses the question of managing the existential risk potential of general Artificial Intelligence (AI), as well as the more near-term yet hazardous and disruptive implications of specialised AI, from the perspective of a particular research project that could make a significant contribution to the development of Artificial Intelligence (AI): the Human Brain Project (HBP), a ten-year Future and Emerging Technologies Flagship of the European Commission. The HBP aims to create an ICT-based scientific research infrastructure for brain research, cognitive neuroscience, and brain-inspired computing. This paper builds on work undertaken in the HBP’s Ethics and Society subproject (SP12). Collaborators from two activities in SP12, Foresight and Researcher Awareness on the one hand, and Ethics Management on the other, use the case of machine intelligence to illustrate key aspects of the dynamic processes through which questions of ethics and society, including existential risks, are approached in the organisational context of the HBP. The overall aim of the paper is to provide practice-based evidence, enriched by self-reflexive assessment of the approach used and its limitations, for guiding policy makers and communities who are, and will be, engaging with such questions

    Comparative genomics of isolates of a pseudomonas aeruginosa epidemic strain associated with chronic lung infections of cystic fibrosis patients

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    Pseudomonas aeruginosa is the main cause of fatal chronic lung infections among individuals suffering from cystic fibrosis (CF). During the past 15 years, particularly aggressive strains transmitted among CF patients have been identified, initially in Europe and more recently in Canada. The aim of this study was to generate high-quality genome sequences for 7 isolates of the Liverpool epidemic strain (LES) from the United Kingdom and Canada representing different virulence characteristics in order to: (1) associate comparative genomics results with virulence factor variability and (2) identify genomic and/or phenotypic divergence between the two geographical locations. We performed phenotypic characterization of pyoverdine, pyocyanin, motility, biofilm formation, and proteolytic activity. We also assessed the degree of virulence using the Dictyostelium discoideum amoeba model. Comparative genomics analysis revealed at least one large deletion (40-50 kb) in 6 out of the 7 isolates compared to the reference genome of LESB58. These deletions correspond to prophages, which are known to increase the competitiveness of LESB58 in chronic lung infection. We also identified 308 non-synonymous polymorphisms, of which 28 were associated with virulence determinants and 52 with regulatory proteins. At the phenotypic level, isolates showed extensive variability in production of pyocyanin, pyoverdine, proteases and biofilm as well as in swimming motility, while being predominantly avirulent in the amoeba model. Isolates from the two continents were phylogenetically and phenotypically undistinguishable. Most regulatory mutations were isolate-specific and 29% of them were predicted to have high functional impact. Therefore, polymorphism in regulatory genes is likely to be an important basis for phenotypic diversity among LES isolates, which in turn might contribute to this strain's adaptability to varying conditions in the CF lung

    Coaxial multi-mode cavities for fundamental SRF research in an unprecedented parameter space

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    Recent developments in superconducting radio-frequency (SRF) research have focused primarily on high frequency elliptical cavities for electron accelerators. Advances have been made in both reducing RF surface resistance and pushing the readily achievable accelerating gradient by using novel SRF cavity treatments including surface processing, custom heat treatments, and flux expulsion. Despite the global demand for SRF based hadron accelerators, the advancement of TEM mode cavities has lagged behind. To address this, two purpose-built research cavities, one quarter-wave and one half-wave resonator, have been designed and built to allow characterization of TEM-mode cavities with standard and novel surface treatments. The cavities are intended as the TEM mode equivalent to the 1.3GHz single cell cavity, which is the essential tool for high frequency cavity research. Given their coaxial structure, the cavities allow testing at the fundamental mode and higher harmonics, giving unique insight into the role of RF frequency on fundamental loss mechanisms from intrinsic and extrinsic sources. In this paper, the cavities and testing infrastructure are described and the first performance measurements of both cavities are presented

    Transmission and lineage displacement drive rapid population genomic flux in cystic fibrosis airway infections of a Pseudomonas aeruginosa epidemic strain

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    Pseudomonas aeruginosa chronic infections of cystic fibrosis (CF) airways are a paradigm for within-host evolution with abundant evidence for rapid evolutionary adaptation and diversification. Recently emerged transmissible strains have spread globally, with the Liverpool Epidemic Strain (LES) the most common strain infecting the UK CF population. Previously we have shown that highly divergent lineages of LES can be found within a single infection, consistent with super-infection among a cross-sectional cohort of patients. However, despite its clinical importance, little is known about the impact of transmission on the genetic structure of these infections over time. To characterize this, we longitudinally sampled a meta-population of 15 genetic lineages within the LES over 13 months among seven chronically infected CF patients by genome sequencing. Comparative genome analyses of P. aeruginosa populations revealed that the presence of coexisting lineages contributed more to genetic diversity within an infection than diversification in situ. We observed rapid and substantial shifts in the relative abundance of lineages and replacement of dominant lineages, likely to represent super-infection by repeated transmissions. Lineage dynamics within patients led to rapid changes in the frequencies of mutations across suites of linked loci carried by each lineage. Many loci were associated with important infection phenotypes such as antibiotic resistance, mucoidy and quorum sensing, and were repeatedly mutated in different lineages. These findings suggest that transmission leads to rapid shifts in the genetic structure of CF infections, including in clinically important phenotypes such as antimicrobial resistance, and is likely to impede accurate diagnosis and treatment

    An examination of business occupier relocation decision making : distinguishing small and large firm behaviour

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    This paper explores how business occupiers decide whether and where to relocate. It captures the experience and behaviour of a range of sizes and types of business occupier and subjects their decision-making processes to detailed scrutiny. A linear three-stage decision model is used to sequence and structure interviews with individuals who have intimate involvement with the relocation of 28 firms and organizations in Tyne and Wear, in the north-east of England. The 'constant comparative' method is used to analyse the interview data, from which emerges 18 key concepts, comprising 51 characteristic components. Using an axial approach, these are organized into 10 cross-cutting themes that represent the main areas of consideration or influence on the thinking of the people involved in determining whether a firm or organization should relocate and, if so, where to. The resulting analysis finds that organizations adopt varying degrees of sophistication when making relocation decisions; small firms are more inclined to make decisions based on constrained information; larger organizations adopt a more complex approach. Regardless of firm size, key individuals exert considerable influence over the decision-making process and its outcome
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