Automation of three-dimensional structured mesh generation for turbomachinery blade passages

Hybrid tools have been developed which greatly reduce the time required to generate three-dimensional structured CFD meshes for turbomachinery blade passages. RAGGS, an existing Rockwell proprietary, general purpose mesh generation and visualization system, provides the starting point and framework for tool development. Utilities which manipulate and interface with RAGGS tools have been developed to (1) facilitate blade geometry inputs from point or CAD representations, (2) automate auxiliary surface creation, and (3) streamline and automate edge, surface, and subsequent volume mesh generation from minimal inputs. The emphasis of this approach has been to maintain all the functionality of the general purpose mesh generator while simultaneously eliminating the bulk of the repetitive and tediuos manual steps in the mesh generation process. Using this approach, mesh generation cycle times have been reduced from the order of days down to the order of hours

NLS base heating CFD analysis

Concerns raised over possible base heating effects on the National Launch System (NLS) 1.5 stage reference vehicle resulted in the use of CFD as a predictive analysis tool. The objective established was to obtain good engineering solutions to describe the base region flowfields at 10,000 ft and 50,000 ft altitudes. The Rockwell USA CFD code was employed with a zero-equation turbulence model and a four species, 1 step chemical kinetics package. Three solutions were generated for the specified altitudes on coarse and fine grids. CFD results show the base region flowfields to be highly three dimensional in character. At the 10,000 ft altitude, plumes contract soon after exiting the nozzles and do not interact with each other. No mechanism was identified for driving hot gas back into the base region and no significant amounts of hydrogen or water were found in the base region. Consequently, surface temperatures were all near the ambient level. At 50,000 ft, the nozzle exhaust plumes begin to interact, particularly those of the two inboard engines which are closer together. A small amount of hot gas is recirculated between the inboard nozzles near the nozzle exit plane. As a result, base region surface temperatures are slightly elevated, but still remain well within the design guideline of 1000 R

Criteria for evaluation of grid generation systems

Many CFD grid generation systems are in use nationally, but few comparative studies have been performed to quantify their relative merits. A study was undertaken to systematically evaluate and select the best CFD grid generation codes available. Detailed evaluation criteria were established as the basis for the evaluation conducted. Descriptions of thirty-four separate criteria, grouped into eight general categories are provided. Benchmark test cases, developed to test basic features of selected codes, are described in detail. Scoring guidelines were generated to establish standards for measuring code capabilities, ensuring uniformity of ratings, and minimizing personal bias among the three code evaluators. Ten candidate codes were identified from government, industry, universities, and commercial software companies. A three phase evaluation was conducted. In Phase 1, ten codes identified were screened through conversations with code authors and other industry experts. Seven codes were carried forward into a Phase 2 evaluation in which all codes were scored according to the predefined criteria. Two codes emerged as being significantly better than the others: RAGGS and GRIDGEN. Finally, these two codes were carried forward into a Phase 3 evaluation in which complex 3-D multizone grids were generated to verify capability

CFD analysis of turbopump volutes

An effort is underway to develop a procedure for the regular use of CFD analysis in the design of turbopump volutes. Airflow data to be taken at NASA Marshall will be used to validate the CFD code and overall procedure. Initial focus has been on preprocessing (geometry creation, translation, and grid generation). Volute geometries have been acquired electronically and imported into the CATIA CAD system and RAGGS (Rockwell Automated Grid Generation System) via the IGES standard. An initial grid topology has been identified and grids have been constructed for turbine inlet and discharge volutes. For CFD analysis of volutes to be used regularly, a procedure must be defined to meet engineering design needs in a timely manner. Thus, a compromise must be established between making geometric approximations, the selection of grid topologies, and possible CFD code enhancements. While the initial grid developed approximated the volute tongue with a zero thickness, final computations should more accurately account for the geometry in this region. Additionally, grid topologies will be explored to minimize skewness and high aspect ratio cells that can affect solution accuracy and slow code convergence. Finally, as appropriate, code modifications will be made to allow for new grid topologies in an effort to expedite the overall CFD analysis process

Code Validation Study for Base Flows

New and old rocket launch concepts recommend the clustering of motors for improved lift capability. The flowfield of the base region of the rocket is very complex and can contain high temperature plume gases. These hot gases can cause catastrophic problems if not adequately designed for. To assess the base region characteristics, advanced computational fluid dynamics (CFD) is being used. As a precursor to these calculations the CFD code requires validation on base flows. The primary objective of this code validation study was to establish a high level of confidence in predicting base flows with the USA CFD code. USA has been extensively validated for fundamental flows and other applications. However, base heating flows have a number of unique characteristics so it was necessary to extend the existing validation for this class of problems. In preparation for the planned NLS 1.5 Stage base heating analysis, six case sets were studied to extend the USA code validation data base. This presentation gives a cursive review of three of these cases. The cases presented include a 2D axi-symmetric study, a 3D real nozzle study, and a 3D multi-species study. The results of all the studies show good general agreement with data with no adjustments to the base numerical algorithms or physical models in the code. The study proved the capability of the USA code for modeling base flows within the accuracy of available data

New insights into the classification and nomenclature of cortical GABAergic interneurons.

A systematic classification and accepted nomenclature of neuron types is much needed but is currently lacking. This article describes a possible taxonomical solution for classifying GABAergic interneurons of the cerebral cortex based on a novel, web-based interactive system that allows experts to classify neurons with pre-determined criteria. Using Bayesian analysis and clustering algorithms on the resulting data, we investigated the suitability of several anatomical terms and neuron names for cortical GABAergic interneurons. Moreover, we show that supervised classification models could automatically categorize interneurons in agreement with experts' assignments. These results demonstrate a practical and objective approach to the naming, characterization and classification of neurons based on community consensus

GABA Expression and Regulation by Sensory Experience in the Developing Visual System

The developing retinotectal system of the Xenopus laevis tadpole is a model of choice for studying visual experience-dependent circuit maturation in the intact animal. The neurotransmitter gamma-aminobutyric acid (GABA) has been shown to play a critical role in the formation of sensory circuits in this preparation, however a comprehensive neuroanatomical study of GABAergic cell distribution in the developing tadpole has not been conducted. We report a detailed description of the spatial expression of GABA immunoreactivity in the Xenopus laevis tadpole brain at two key developmental stages: stage 40/42 around the onset of retinotectal innervation and stage 47 when the retinotectal circuit supports visually-guided behavior. During this period, GABAergic neurons within specific brain structures appeared to redistribute from clusters of neuronal somata to a sparser, more uniform distribution. Furthermore, we found that GABA levels were regulated by recent sensory experience. Both ELISA measurements of GABA concentration and quantitative analysis of GABA immunoreactivity in tissue sections from the optic tectum show that GABA increased in response to a 4 hr period of enhanced visual stimulation in stage 47 tadpoles. These observations reveal a remarkable degree of adaptability of GABAergic neurons in the developing brain, consistent with their key contributions to circuit development and function

Micro-connectomics: probing the organization of neuronal networks at the cellular scale.

Defining the organizational principles of neuronal networks at the cellular scale, or micro-connectomics, is a key challenge of modern neuroscience. In this Review, we focus on graph theoretical parameters of micro-connectome topology, often informed by economical principles that conceptually originated with Ramón y Cajal's conservation laws. First, we summarize results from studies in intact small organisms and in samples from larger nervous systems. We then evaluate the evidence for an economical trade-off between biological cost and functional value in the organization of neuronal networks. Various results suggest that many aspects of neuronal network organization are indeed the outcome of competition between these two fundamental selection pressures.This work was supported by the National Institute of Health Research (NIHR) Cambridge Biomedical Research Centre.This is the author accepted manuscript. It is currently under an indefinite embargo pending publication by the Nature Publishing Group

A multimodal cell census and atlas of the mammalian primary motor cortex

ABSTRACT We report the generation of a multimodal cell census and atlas of the mammalian primary motor cortex (MOp or M1) as the initial product of the BRAIN Initiative Cell Census Network (BICCN). This was achieved by coordinated large-scale analyses of single-cell transcriptomes, chromatin accessibility, DNA methylomes, spatially resolved single-cell transcriptomes, morphological and electrophysiological properties, and cellular resolution input-output mapping, integrated through cross-modal computational analysis. Together, our results advance the collective knowledge and understanding of brain cell type organization: First, our study reveals a unified molecular genetic landscape of cortical cell types that congruently integrates their transcriptome, open chromatin and DNA methylation maps. Second, cross-species analysis achieves a unified taxonomy of transcriptomic types and their hierarchical organization that are conserved from mouse to marmoset and human. Third, cross-modal analysis provides compelling evidence for the epigenomic, transcriptomic, and gene regulatory basis of neuronal phenotypes such as their physiological and anatomical properties, demonstrating the biological validity and genomic underpinning of neuron types and subtypes. Fourth, in situ single-cell transcriptomics provides a spatially-resolved cell type atlas of the motor cortex. Fifth, integrated transcriptomic, epigenomic and anatomical analyses reveal the correspondence between neural circuits and transcriptomic cell types. We further present an extensive genetic toolset for targeting and fate mapping glutamatergic projection neuron types toward linking their developmental trajectory to their circuit function. Together, our results establish a unified and mechanistic framework of neuronal cell type organization that integrates multi-layered molecular genetic and spatial information with multi-faceted phenotypic properties