1,885 research outputs found

    Introducing a Mechanistic Model in Digital Soil Mapping to Predict Soil Organic Matter Stocks in the Cantabrian Region (Spain)

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    ABSTRACT: Digital soil mapping (DSM) is an effective mapping technique that supports the increased need for quantitative soil data. In DSM, soil properties are correlated with environmental characteristics using statistical models such as regression. However, many of these relationships are explicitly described in mechanistic simulation models. Therefore, the mechanistic relationships can, in theory, replace the statistical relationships in DSM. This study aims to develop a mechanistic model to predict soil organic matter (SOM) stocks in Natura2000 areas of the Cantabria region (Spain). The mechanistic model is established in four steps: (a) identify major processes that influence SOM stocks, (b) review existing models describing the major processes and the respective environmental data that they require, (c) establish a database with the required input data, and (d) calibrate the model with field observations. The SOM stocks map resulting from the mechanistic model had a mean error (ME) of -2 t SOM ha−1 and a root mean square error (RMSE) of 66t SOM ha-1. The Lin's concordance correlation coefficient was 0.47 and the amount of variance explained (AVE) was 0.21. The results of the mechanistic model were compared to the results of a statistical model. It turned out that the correlation coefficient between the two SOM stock maps was 0.8. This study illustrated that mechanistic soil models can be used for DSM, which brings new opportunities. Mechanistic models for DSM should be considered for mapping soil characteristics that are difficult to predict by statistical models, and for extrapolation purposes.This research was financially supported by the Environmental Hydraulics Institute ‘IH Cantabria of Universidad de Cantabria’ and the CGIAR Research Programme on Climate Change, Agriculture and Food Security (CCAFS). The CCAFS project is carried out with support from CGIAR Fund Donors and through bilateral funding agreements. Besides the financial support, we would like to thank Sara Alcalde Aparicio for collaboration in the collection and analyses of soil samples

    Edible mushrooms as a natural source of food ingredient/additive replacer

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    Although mushrooms have been exploited since ancient times because of their particular taste and therapeutic properties, the interest in edible species as a source of ingredients and bioactive compounds is recent. Their valuable nutritional contents in protein, dietary fiber and bioactive compounds make them ideal candidates for use in foods in efforts to improve their nutritional profiles. This trend is in line with the consumer’s growing demand for more plant-based foods. The present review paper explores different studies focused on the use of common edible mushrooms as an ingredient and additive replacer by using them in fresh, dried, or even extract forms, as meat, fat, flour, salt, phosphates, and antioxidant replacers. The replacement of meat, fat, flour, and salt by mushrooms from commercial species has been successful despite sensorial and textural parameters can be affected. Moderate concentrations of mushrooms, especially in powder form, should be considered, particularly in non-familiarized consumers. In the case of antioxidant and antimicrobial properties, results are variable, and more studies are necessary to determine the chemical aspects involved.The authors thank to GAIN (Axencia Galega de Innovación) for supporting this review (grant number IN607A2019/01). Authors are members of the Healthy Meat network, funded by CYTED (ref. 119RT0568).info:eu-repo/semantics/publishedVersio

    Unique Organization of the Nuclear Envelope in the Post-natal Quiescent Neural Stem Cells

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    Neural stem cells (B1 astrocytes; NSCs) in the adult ventricular-subventricular-zone (V-SVZ) originate in the embryo. Surprisingly, recent work has shown that B1 cells remain largely quiescent. They are reactivated postnatally to function as primary progenitors for neurons destined for the olfactory bulb and some corpus callosum oligodendrocytes. The cellular and molecular properties of quiescent B1 cells remain unknown. Here we found that a subpopulation of B1 cells has a unique nuclear envelope invagination specialization similar to envelope-limited chromatin sheets (ELCS), reported in certain lymphocytes and some cancer cells. Using molecular markers, [3H]thymidine birth-dating, and Ara-C, we found that B1 cells with ELCS correspond to quiescent NSCs. ELCS begin forming in embryonic radial glia cells and represent a specific nuclear compartment containing particular epigenetic modifications and telomeres. These results reveal a unique nuclear compartment in quiescent NSCs, which is useful for identifying these primary progenitors and study their gene regulation

    Cocoa coproducts-based and walnut oil gelled emulsion as animal fat replacer and healthy bioactive source in beef burgers

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    The aim of this work was to evaluate the effects on the chemical, physic-chemical, tech-nological, and sensory properties of beef burger when replacing different quantities of fat (50 and 100%) with different levels of oil-in-water-gelled emulsion elaborated with walnut oil and cocoa bean shell flour (GECW). The chemical composition of the samples was affected by the fat replace-ment. The reformulation increased the moisture and ash content while the fat and protein content decreased with respect to the control sample. The linolenic and linolenic acid content of the beef burgers increased as the GECW replacement was augmented. The polyunsaturated fatty/saturated fatty acid ratio increased in both raw and cooked burgers, whereas the atherogenicity index and thrombogenicity index were reduced in both raw and cooked burgers with respect to the control sample. The use of GECW as a fat replacer was found to be effective in improving the cooking loss. Similarly, there were positive effects on reductions in the diameter and the increases in the thickness of the beef burgers. Regarding lipid stability, in both the raw and cooked burgers, the reformulation increased the 2-thiobarbituric acid reactive substance (TBARs) values with respect to the control sample. In both types of reformulated burgers, three bound polyphenols (mainly catechin and epicatechin) and two free polyphenols were identified, as were methylxanthines theobromine and caffeine. The sensory properties for the control and partial pork backfat replacement treatments were similar, while the sample with the total pork backfat replacement treatment showed the lowest scores. The blend of cocoa bean shell flour and walnut oil could be used as new ingredients for the development of beef burgers with a healthier nutritional profile without demeriting their sensory or cooking characteristics and physic-chemical properties.This research was funded by Programa Iberoamericano de Ciencia y Tecnología para el Desarrollo CYTED: 119RT0568.info:eu-repo/semantics/publishedVersio

    Immature excitatory neurons develop during adolescence in the human amygdala

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    The human amygdala grows during childhood, and its abnormal development is linked to mood disorders. The primate amygdala contains a large population of immature neurons in the paralaminar nuclei (PL), suggesting protracted development and possibly neurogenesis. Here we studied human PL development from embryonic stages to adulthood. The PL develops next to the caudal ganglionic eminence, which generates inhibitory interneurons, yet most PL neurons express excitatory markers. In children, most PL cells are immature (DCX+PSA-NCAM+), and during adolescence many transition into mature (TBR1+VGLUT2+) neurons. Immature PL neurons persist into old age, yet local progenitor proliferation sharply decreases in infants. Using single nuclei RNA sequencing, we identify the transcriptional profile of immature excitatory neurons in the human amygdala between 4–15 years. We conclude that the human PL contains excitatory neurons that remain immature for decades, a possible substrate for persistent plasticity at the interface of the hippocampus and amygdala

    Espectrofenología con datos Sentinel 2: definición de curvas de referencia para la caracterización de ecosistemas forestales

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    El seguimiento de la respuesta espectral obtenida por sensores remotos de media resolución relativo a formaciones vegetales puede proporcionar información muy relevante para el estudio de su distribución y dinámica a lo largo de gradientes ambientales y escalas geográficas. La combinación del ciclo orbital y el ancho de barrido de Sentinel 2 proporciona datos cada 5 días en latitudes medias, lo que permite realizar un seguimiento temporal de alta resolución relacionado con etapas o fases fenológicas de los ecosistemas en las que varían su composición, estructura o funcionamiento. En este contexto, el objetivo del presente estudio consiste en la obtención de curvas espectrofenológicas promedio para algunas de las principales formaciones arbóreas presentes en Cantabria, así como el análisis y la caracterización de métricas fenológicas espaciales que permitirán caracterizar el funcionamiento diferencial de la vegetación en el continuo del paisaje. Para la definición de las curvas se han empleado todos los datos históricos disponibles del sensor MSI, a bordo de los satélites Sentinel 2 A y B, con los que se ha generado una serie temporal de alta resolución del índice NDVI. Los datos se han agregado temporalmente a nivel mensual tras aplicar un filtro de nubes y sombras que maximiza la calidad del dato a nivel de pixel y un suavizado temporal de la serie para eliminar valores anómalos y perdidos. Los valores del índice han sido extraídos para una muestra de 230 puntos localizados con precisión GPS y cuya composición florística ha sido caracterizada por botánicos en campo. Se han obtenido curvas espectrofenológicas estacionales para los años del 2017 al 2020 y las curvas promedio anual, determinando su variabilidad y el grado de representatividad para las formaciones estudiadas. Finalmente se han obtenido las ecuaciones de las funciones ajustadas a las curvas promedio por formación vegetal aplicando análisis de Fourier. Los resultados muestran rasgos diferenciales para cada una de las tipologías forestales analizadas debido, principalmente, a la existencia de variaciones fenológicas intra e interanuales. Estos resultados demuestran el interés de emplear series temporales de datos para la determinación de curvas de referencia para diferentes tipologías forestales que permitan identificar su distribución espacial y otros rasgos relativos a su estructura y funcionamiento. Potencialmente, estas series de datos podrían ser utilizadas para la detección temprana de anomalías funcionales relacionadas con efectos derivados de perturbaciones naturales o antrópicas en un contexto de Cambio Global.Proyecto WATERLANDS", código PID2019-107085RB-I00, financiado por MCIN/AEI/10.13039/501100011033/ y por FEDER; “A way of making Europe, that seeks to understand the linkages between water (river) and land cover (forest) dynamics in mountain systems” https://waterlands.ihcantabria.com/

    High-resolution hepatitis C virus subtyping using NS5B deep sequencing and phylogeny, an alternative to current methods

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    HepatitisCvirus(HCV)is classified into seven major genotypesand67 subtypes. Recent studies haveshownthat inHCVgenotype 1-infected patients, response rates to regimens containingdirect-acting antivirals(DAAs)are subtype dependent. Currently available genotypingmethods have limited subtyping accuracy.Wehave evaluated theperformanceof adeep-sequencing-basedHCVsubtyping assay, developed for the 454/GS-Junior platform, in comparisonwith thoseof two commercial assays (VersantHCVgenotype 2.0andAbbott Real-timeHCVGenotype II)andusingdirectNS5Bsequencing as a gold standard (direct sequencing), in 114 clinical specimenspreviously tested by first-generation hybridization assay (82 genotype 1and32 with uninterpretable results). Phylogenetic analysis of deep-sequencing reads matched subtype 1 callingbypopulation Sanger sequencing(69%1b,31%1a) in 81 specimensandidentified amixed-subtype infection (1b/3a/1a) in one sample. Similarly,amongthe 32previously indeterminate specimens, identical genotypeandsubtype results were obtained by directanddeep sequencing in all but four samples with dual infection. In contrast, both VersantHCVGenotype 2.0andAbbott Real-timeHCVGenotype II failed subtype 1 calling in 13 (16%) samples eachandwere unable to identify theHCVgenotype and/or subtype inmore than half of the nongenotype 1 samples.Weconcluded that deep sequencing ismore efficient forHCVsubtyping than currently available methodsandallows qualitative identificationofmixed infectionsandmay bemorehelpfulwith respect to informing treatment strategies withnewDAA-containing regimens across allHCVsubtypesThis study has been supported by CDTI (Centro para el Desarrollo Tecnológico Industrial), Spanish Ministry of Economics and Competitiveness (MINECO), IDI-20110115; MINECO projects SAF 2009-10403; and also by the Spanish Ministry of Health, Instituto de Salud Carlos III (FIS) projects PI10/01505, PI12/01893, and PI13/00456. CIBERehd is funded by the Instituto de Salud Carlos III, Madrid, Spain. Work at CBMSO was supported by grant MINECO-BFU2011-23604, FIPSE, and Fundación Ramón Areces. X. Forns received unrestricted grant support from Roche and has acted as advisor for MSD, Gilead, and Abbvie. M. Alvarez-Tejado, J. Gregori, and J. M. Muñoz work in Roche Diagnostic

    Coordinación y seguimiento de la docencia semipresencial en el Máster Universitario en Ingeniería Informática

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    El Máster Universitario en Ingeniería Informática de la Universidad de Alicante está regulado según las recomendaciones establecidas para la ordenación de las enseñanzas de Máster en el ámbito de la Ingeniería Informática, ofreciendo una formación avanzada en las tecnologías de la informática que capacita para la elaboración, planificación, dirección y coordinación de proyectos, así como su gestión técnica y económica en todos los ámbitos de la ingeniería informática, siguiendo criterios de calidad y medioambientales. El propósito principal de este trabajo de investigación docente es el seguimiento y coordinación de la docencia semipresencial en las asignaturas del Máster Universitario en Ingeniería Informática, tanto en la metodología docente como en los materiales y la carga de trabajo para el alumnado. Puesto que la implantación de la semipresencialidad es novedosa en este curso, es especialmente importante la coordinación entre todas las asignaturas y el seguimiento del desarrollo académico para detectar y solventar los posibles problemas que puedan aparecer y establecer un plan de mejoras que permita la mejora continua de la titulación. Para ello, se han realizado reuniones de coordinación de todos los responsables de asignaturas del Máster y reuniones con el alumnado para comprobar el progreso académico a lo largo del curso

    Renaturalización pasiva en la Cordillera Cantábrica: bases y retos científicos para una sostenibilidad socio-ecológica

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    La renaturalización pasiva, o recuperación de los ecosistemas tras el abandono del uso humano del territorio, representa una oportunidad para restaurar biodiversidad y servicios ecosistémicos en un contexto de crisis ambiental global. No obstante, también puede provocar declive de determinadas especies, cambios en los regímenes de perturbación o pérdidas de valores culturales. Esta revisión integra el conocimiento actual sobre patrones y procesos ecológicos de renaturalización pasiva en la Cordillera Cantábrica (NO España) para generar una primera base de evidencia sobre la que apoyar la gestión ambiental. Se observa un patrón de recuperación de bosques y matorrales en áreas anteriormente ocupadas por pastizales ganaderos y campos agrícolas, que implica cambios en la estructura del paisaje, la riqueza y la composición de las comunidades ecológicas, la acumulación de carbono en biomasa y suelos, y la provisión de diferentes servicios ecosistémicos. Los procesos que modulan la renaturalización son: 1) la dispersión de organismos, que condiciona la sucesión ecológica y la persistencia de especies a escala regional; 2) las dinámicas tróficas, cuyo funcionamiento depende de la presencia de grandes depredadores apicales y de la estructura del paisaje; y 3) los regímenes de perturbaciones ecológicas, actualmente dominados por la ganadería y los incendios antropogénicos. Por sus efectos ecológicos, la renaturalización pasiva representa una estrategia efectiva de restauración de ecosistemas y sus funciones clave en la Cordillera Cantábrica. Su aceptación social dependerá de la compatibilización de este proceso con el uso ganadero y ecoturístico del territorio, así como de la eficacia de las políticas conservacionistas, agrarias y forestales.Este trabajo recibe apoyo de los proyectos AYUD/2021/51261 (FICYT, Gobierno del Principado de Asturias, FEDER) y PID2019-107085RB-I00 (MCIN/AEI, FEDER). Rocío Rosa García proporcionó valiosa información sobre agroganadería y renaturalización. Mercedes Molina y dos revisores anónimos revisaron el manuscrito original
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