Species sorting drives variation of boreal lake and river macrophyte communities

Metacommunity paradigms are increasingly studied to explain how environmental control and spatial patterns determine variation in community composition. However, the relative importance of these patterns on biological assemblages among different habitats is not well known. We investigated the relative roles of local, catchment and spatial variables based on overland and watercourse distances in explaining the variation of community structure of lake and river macrophytes in two large river basins at two spatial extents (within and across river basins). Partial redundancy analysis was used to explore the share of variability in macrophyte communities attributable to local environmental conditions, catchment land cover and space (generated with Principle Coordinates of Neighbour Matrices). We found that local variables had the highest effect on both lake and river macrophyte communities, followed by catchment variables. Space had no or only marginal influence on the community structure regardless of used distance measure. Total phosphorus, conductivity and turbidity of the local variables contributed most for lake macrophytes, whereas pH and color had largest independent contribution for variation in river macrophytes. Size of catchment area and proportion of lakes and agriculture were the most important catchment variables in both habitats. The strong importance of environmental control suggests that both lake and river macrophyte communities are structured by species sorting. This finding gives support to the validity of assessment systems based on the European Water Framework Directive

Isoëtes sabatina (Isoëtaceae, Lycopodiopsida): Taxonomic distinctness and preliminary ecological insights

Isoëtes sabatina is the rarest aquatic quillwort in Europe. Although recently found (2013) in Lake Bracciano (central Italy), the species is just one step away from extinction with an estimated population not exceeding 400 individuals and a spatial range of a few hundred square metres. Lake Bracciano is a deep, oligo-mesotrophic Mediterranean volcanic lake that has been subjected to human activities. From January to October 2017, the lake experienced a dramatic water level decrease (up to −1.50 m), which significantly affected the littoral zone and the habitat of I. sabatina. To improve the chances of survival of I. sabatina, the first eco-taxonomic investigation on this species was carried out to describe its genetic distinctness, physical and chemical requirements and companion species. The phylogenetic position of I. sabatina was investigated by applying standard DNA barcoding methods. Simultaneously, during summer 2019, the physical and chemical features of water and sediments of the I. sabatina population and five small Alpine lakes colonized by Isoëtes echinospora – a supposed close relative – were characterized. These data were then compared with the available data on the trophic requirements of the target obligate aquatic Isoëtes, together with Isoëtes lacustris and Isoëtes malinverniana. The present survey confirmed the taxonomic and ecological distinctness of I. sabatina – providing the first evidence of genetic differentiation from I. echinospora. Isoëtes sabatina grows in waters with temperature, conductivity and total alkalinity up to 30°C, 561 μS cm−1 and 3.45 meq L−1, respectively. The edaphic requirements of I. sabatina confirm its outstanding conservation value, and this study offers a basic understanding of how to prevent its extinction. Now, all possible actions must be taken immediately to save this species

Integrating dispersal proxies in ecological and environmental research in the freshwater realm

Dispersal is one of the key mechanisms affecting the distribution of individuals, populations, and communities in nature. Despite advances in the study of single species, it has been notoriously difficult to account for dispersal in multispecies metacommunities, where it potentially has strong effects on community structure beyond those of local environmental conditions. Dispersal should thus be directly integrated in both basic and applied research by using proxies. Here, we review the use of proxies in the current metacommunity research, suggest new proxies, and discuss how proxies could be used in community modelling, particularly in freshwater systems. We suggest that while traditional proxies may still be useful, proxies formerly utilized in transport geography may provide useful novel insights into the structuring of biological communities in freshwater systems. We also suggest that understanding the utility of such proxies for dispersal in metacommunities is highly important for many applied fields such as freshwater bioassessment, conservation planning, and recolonization research in the context of restoration ecology. These research fields have often ignored spatial dynamics and focused mostly on local environmental conditions and changes therein. Yet, the conclusions of these applied studies may change considerably if dispersal is taken into account

Drivers of plant traits that allow survival in wetlands

Plants have developed a suite of traits to survive the anaerobic and anoxic soil conditions in wetlands. Previous studies on wetland plant adaptive traits have focused mainly on physiological aspects under experimental conditions, or compared the trait expression of the local species pool. Thus, a comprehensive analysis of potential factors driving wetland plant adaptive traits under natural environmental conditions is still missing.In this study, we analysed three important wetland adaptive traits, i.e. root porosity, root/shoot ratio and underwater photosynthetic rate, to explore driving factors using a newly compiled dataset of wetland plants. Based on 21 studies at 38 sites across different biomes, we found that root porosity was affected by an interaction of temperature and hydrological regime; root:shoot ratio was affected by temperature, precipitation and habitat type; and underwater photosynthetic rate was affected by precipitation and life form. This suggests that a variety of driving mechanisms affect the expression of different adaptive traits.The quantitative relationships we observed between the adaptive traits and their driving factors will be a useful reference for future global methane and denitrification modelling studies. Our results also stress that besides the traditionally emphasized hydrological driving factors, other factors at several spatial scales should also be taken into consideration in the context of future functional wetland ecology.Environmental Biolog

Yhtenäiset vaatimukset lääketieteen ja hammaslääketieteen tohtorintutkinnolle Suomessa

Oulussa järjestettiin 13.6.2018 lääketieteen ja hammaslääketieteen tohtorintutkinnon konsensuskokous, jossa käytiin läpi vallitsevia käytäntöjä ja muutostarpeita. Ohjeellinen tutkinnon laajuus on neljä vuotta kokopäiväistä työtä, ja muodollisesti tutkinnon myöntää yhtä yliopistoa lukuun ottamatta aina vastaava tiedekunta. Ohjaajia on tyypillisesti kahdesta kolmeen, ja yksi on pääohjaaja. Seurantaryhmä on käytössä tai ollaan ottamassa käyttöön kaikissa yliopistoissa. Aktiivinen seurantaryhmä tukee merkittävästi ohjausprosessia. Väitöskirjojen asiantuntijoina toimivat esitarkastajat ja vastaväittäjät ovat yleensä muualta kuin suorituspaikan yliopistosta. Osittain tästä syystä suuria eroja eri yliopistojen tohtorintutkinnon vaatimusten välillä ei todettu. Haasteena väitöskirjatyössä on kliinisen työn paine ja nuorten kollegoiden ruuhkavuosien kuormittuminen, mitkä heikentävät mahdollisuuksia tutkimustyöhön. Myönteisiä muutoksia ovat olleet tohtoriopintojen systematisoituminen sekä ohjaamisen tason ja väitöskirjantekijöiden tuen paraneminen. Kaikki osallistuneet kannattivat käytäntöjen vakiinnuttamista ja yhtenäistämistä säännöllisellä konsensuskokoustyöskentelyllä.</p

Factors associated with failed epidural blood patch after accidental dural puncture in obstetrics: a prospective, multicentre, international cohort study

BackgroundEpidural blood patch is commonly used for management of post-dural puncture headache after accidental dural puncture. The primary aim was to determine factors associated with failed epidural blood patch.MethodsIn this prospective, multicentre, international cohort study, parturients ≥18 yr receiving an epidural blood patch for treatment of post-dural puncture headache were included. Failed epidural blood patch was defined as headache intensity numeric rating scale (NRS) score ≥7 in the upright position at 4, 24, or 48 h, or the need for a second epidural blood patch, and complete success by NRS=0 at 0–48 h after epidural blood patch. All others were considered partial success. Multinominal logistic regression was used for statistical analyses with PResultsIn all, 643 women received an epidural blood patch. Complete data to classify failure were available in 591 (91.9%) women. Failed epidural blood patch occurred in 167 (28.3%) patients; 195 (33.0%) were completely successful and 229 (38.7%) partially successful. A total of 126 women (19.8%) received a second epidural blood patch. A statistically significant association with failure was observed in patients with a history of migraine, when the accidental dural puncture occurred between lumbar levels L1/L3 compared with L3/L5 and when epidural blood patch was performed bleeds were diagnosed.ConclusionsFailed epidural blood patch occurred in 28.3% of women. Independent modifiable factors associated with failure were higher lumbar level of accidental dural puncture and short interval between accidental dural puncture and epidural blood patch. A history of migraine was associated with a higher risk of second epidural blood patch.</div

Puntos de inflexión en los gradientes de composición de las comunidades de plantas acuáticas de diferentes continentes

Sección: SIBECOL-AIL Meeting in Aveiro-2022[EN] Unravelling patterns and mechanisms of biogeographical transitions is crucial if we are to understand compositional gradients at large spatial extents, but no studies have thus far examined breakpoints in community composition of freshwater plants across continents. Using a dataset of almost 500 observations of lake plant community composition from six continents, we examined, for the first time, if such breakpoints in geographical space exist for freshwater plants and how well a suite of ecological factors (including climatic and local environmental variables) can explain transitions in community composition from the subtropics to the poles. Our combination of multivariate regression tree (MRT) analysis and k-means partitioning suggests that the most abrupt breakpoint exists between temperate to boreal regions on the one hand and freshwater plant communities harbouring mainly subtropical or Mediterranean assemblages on the other. The spatially structured variation in current climatic conditions is the most likely candidate for controlling these latitudinal patterns, although one cannot rule out joint effects of eco-evolutionary constraints in the harsher high-latitude environments and post-glacial migration lags after Pleistocene Ice Ages. Overall, our study supports the foundations of global regionalisation for freshwater plants and anticipates further biogeographical research on freshwater plant communities once datasets have been harmonised for conducting large-scale spatial analyses[ES] Desentrañar los patrones y mecanismos que subyacen a las transiciones biogeográficas es un requisito fundamental a la hora de comprender los gradientes de composición de las comunidades ecológicas a grandes extensiones espaciales, si bien ningún estudio ha examinado explícitamente estos puntos de inflexión para comunidades de plantas acuáticas de diferentes continentes. Utilizando una completa base de datos que condensa un total de casi 500 observaciones individuales sobre las comunidades florísticas lacustres de seis continentes, este trabajo pretende delinear las transiciones biogeográficas en plantas acuáticas a escala global, así como valorar el papel que desempeñan diversos mecanismos ecológicos (a saber, las condiciones climáticas y las características locales del hábitat) sobre estos puntos de inflexión en el espacio geográfico comprendido entre las latitudes subtropicales y los polos. Nuestros resultados obtenidos mediante la ejecución simultánea de árboles de regresión multivariante (MRT) y algoritmos de agrupación por k-medias demuestran la existencia de un punto de inflexión entre las regiones templadas y boreales y los lagos localizados en las bandas subtropicales y en las inmediaciones del Mediterráneo. La estructura espacial que subyace a la distribución de los condicionantes climáticos en nuestro planeta parece ser el principal mecanismo de control de dichas transiciones biogeográficas, si bien estos patrones latitudinales también podrían explicarse en base a constricciones eco-evolutivas en las regiones más septentrionales y a la colonización diferencial de los territorios norteños antaño cubiertos por el hielo durante el Último Máximo Glacial. En síntesis, nuestro estudio proporciona una base teórica preliminar para futuras investigaciones encaminadas a delimitar las unidades geográficas de los principales componentes de la flora acuática contemporánea y también anticipa un creciente interés por los estudios de carácter fitogeográfico en las aguas continentales, si bien los análisis venideros deberán prestar especial atención a la armonización de datos biológicos potencialmente heterogéneos en naturaleza y con orígenes disparesSIJGG was funded by the European Union Next Generation EU/PRTR (grant no. AG325). Academy of Finland supported JH, JGG (grant no. 331957), and JA (grant no. 322652). CFL appreciates financial support from the Spanish Ministry of Science and Technology (grant no. CL2017- 84176R). BAL was supported by National Research, Development, and Innovation Office (grant no. NKFIH, OTKA FK127939) and by the Bolyai János Research Scholarship of the Hungarian Academy of Sciences. SK was supportedby NWO Vidi (grant no. 203098). LR was funded by MESRSI (Ministry of Higher Education, Scientific Research and Innovation of Morocco) as part of the BiodivRestore Program (RESPOND Project) and by the Tour du Valat Foundation. Sampling of the Brazilian coastal lakes was financed by NWO (grant no. W84-549), the National Geographic Society (grant no. 7864-5), and CNPq (grants no. 480122, 490409, 311427

Rhinoviruses in infancy and risk of immunoglobulin E sensitization

Previous data about the role of viruses in the development of allergic immunoglobulin E (IgE) sensitization are contradictory. The aim of this study was to determine the possible associations between exposure to different viruses (rhinovirus, enterovirus, norovirus, and parechovirus) during the first year of life and IgE sensitization. Viruses were analyzed from stool samples collected monthly from infants participating in a prospective birth cohort study. From that study, 244 IgE sensitized case children and 244 nonsensitized control children were identified based on their allergen-specific IgE antibody levels at the age of 6, 18, and 36 months. Stool samples (n = 4576) from the case and control children were screened for the presence of rhinovirus, enterovirus, norovirus, and parechovirus RNA by reverse transcription quantitative polymerase chain reaction. The study showed that rhinovirus was the most prevalent virus detected, present in 921 (20%) samples. None of the viruses were associated with IgE sensitization in the full cohort but after stratifying by sex, the number of rhinovirus positive samples was inversely associated with IgE sensitization in boys (odds ratio [OR]: 0.81; 95% confidence interval [CI]: 0.69-0.94; P = 0.006). There was also a temporal relation between rhinoviruses and IgE sensitization, as rhinovirus exposure during the first 6 months of life was associated with a reduced risk of subsequent IgE sensitization in boys (OR: 0.76; 95% CI: 0.6-0.94; P = 0.016). In conclusion, early exposure to rhinoviruses was inversely associated with IgE sensitization but this protective association was restricted to boys.Peer reviewe

Target highlights in CASP14 : Analysis of models by structure providers

Abstract The biological and functional significance of selected CASP14 targets are described by the authors of the structures. The authors highlight the most relevant features of the target proteins and discuss how well these features were reproduced in the respective submitted predictions. The overall ability to predict three-dimensional structures of proteins has improved remarkably in CASP14, and many difficult targets were modelled with impressive accuracy. For the first time in the history of CASP, the experimentalists not only highlighted that computational models can accurately reproduce the most critical structural features observed in their targets, but also envisaged that models could serve as a guidance for further studies of biologically-relevant properties of proteins. This article is protected by copyright. All rights reserved.Peer reviewe