Diquarks and Exotic Spectroscopy

We propose that the recently discovered \Theta baryon is a bound state of four quarks and an antiquark, containing two highly correlated ud-pairs. If so, the \Theta baryon has positive parity, and it lies in an near-ideally mixed SU(3)_{f} \mathbf{\bar{10}}_{f} oplus \mathbf{8}_{f}. The Roper resonance and the P_{11}(1710) fit naturally into this classification. We predict an isospin 3/2 multiplet of \Xi's (S=-2) with J^{\Pi}=\half^{+} around 1750 MeV. A search for manifestly exotic \Xi^{+} and \Xi^{--} in this mass range could provide a sharp test of our proposal. We predict that charm and bottom analogues of the \Theta baryon are stable against strong decays.Comment: 5 pages, 2 figures, revtex 4, minor corrections and revisions for journal publicatio

On calcium-to-alkalinity anomalies in the North Pacific, Red Sea, Indian Ocean and Southern Ocean

An important factor for predicting the effect of increased CO2 on future acidification of the ocean is a proper understanding of the interactions controlling production and dissolution of calcium carbonate minerals (CaCO3). The production and dissolution of CaCO3 in the ocean can be assessed over large spatial scales by measuring seawater calcium concentrations and total alkalinity (AT), yet past studies suggest that there could be large discrepancies between calcium and AT-based balances of the CaCO3 cycle in the North Pacific and Indian Oceans. Here, we analyse water column samples collected along transects in the North Pacific, Southern Ocean, tropical Indian Ocean and Red Sea for their concentrations of calcium, nutrients, and AT. We find that there is an excess calcium over AT anomaly in the top 1000 m of the tropical Indian Ocean water-column. The source of this anomaly is the dissolution of subsurface gypsum deposits in the Red Sea. We find no evidence for calcium-over-AT anomalies in the North Pacific, in contrast to previous studies. Our results show that, in most cases, calcium and AT data agree well and can be used to reconstruct the marine CaCO3 cycle

Neutral Pion Cross Section and Spin Asymmetries at Intermediate Pseudorapidity in Polarized Proton Collisions at √s=200 GeV

The differential cross section and spin asymmetries for neutral pions produced within the intermediate pseudorapidity range 0.8\u3cηpT/c and is found to agree with a next-to-leading order perturbative QCD calculation. The longitudinal double-spin asymmetry ALL is measured in the same pseudorapidity range and spans a range of Bjorken-x down to x≈0.01. The measured ALL is consistent with model predictions for varying degrees of gluon polarization. The parity-violating asymmetry AL is also measured and found to be consistent with zero. The transverse single-spin asymmetry AN is measured over a previously unexplored kinematic range in Feynman-x and pT. Such measurements may aid our understanding of the onset and kinematic dependence of the large asymmetries observed at more forward pseudorapidity (η≈3) and their underlying mechanisms. The AN results presented are consistent with a twist-3 model prediction of a small asymmetry over the present kinematic range

Compositional variability in a cold-water scleractinian, Lophelia pertusa : new insights into “vital effects”

Author Posting. © American Geophysical Union, 2006. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 7 (2006): Q12004, doi:10.1029/2006GC001354.We analyzed Sr/Ca and Mg/Ca ratios in the thecal wall of Lophelia pertusa, a cold-water coral, using SIMS ion microprobe techniques. The wall grows by simultaneous upward extension and outward thickening. Compositional variability displays similar trends along the upward and outward growth axes. Sr/Ca and Mg/Ca ratios oscillate systematically and inversely. The sensitivity of Lophelia Sr/Ca ratios to the annual temperature cycle (−0.18 mmol · mol−1/°C) is twice as strong as that exhibited by tropical reef corals, and four times as strong as the temperature dependence of Sr/Ca ratios of abiogenic aragonites precipitated experimentally from seawater. A comparison of the skeletal composition of Lophelia with results from precipitation calculations carried out using experimentally determined partition coefficients suggests that both temperature-dependent element partitioning and seasonal changes in the mass fraction of aragonite precipitated from the calcifying fluid influence the composition of Lophelia skeleton. Results from calculations that combine these effects reproduce both the exaggerated amplitude of the Sr/Ca and Mg/Ca oscillations and the inverse relationship between Sr/Ca and Mg/Ca ratios.This study was supported in part by a WHOI Ocean Life Institute fellowship to ALC, by NSF grant OCE-0527350 to G.A.G. and A.L.C., and by the EU 6FP project HERMES, EC contract GOCE-CT-2005-511234 to T.L

Sulfur isotopes in rivers : insights into global weathering budgets, pyrite oxidation, and the modern sulfur cycle

This research was funded by a Foster and Coco Stanback postdoctoral fellowship and a Marie Curie Career Integration Grant (CIG14-631752) to AB. JFA acknowledges the support of NSF-OCE grant 1340174 and NSF-EAR grant 1349858. WF acknowledges the support of a grant from the David and Lucile Packard Foundation.The biogeochemical sulfur cycle is intimately linked to the cycles of carbon, iron, and oxygen, and plays an important role in global climate via weathering reactions and aerosols. However, many aspects of the modern budget of the global sulfur cycle are not fully understood. We present new δ34S measurements on sulfate from more than 160 river samples from different geographical and climatic regions—more than 46% of the world's freshwater flux to the ocean is accounted for in this estimate of the global riverine sulfur isotope budget. These measurements include major rivers and their tributaries, as well as time series, and are combined with previously published data to estimate the modern flux-weighted global riverine δ34S as 4.4 ± 4.5‰ (V-CDT), and 4.8 ± 4.9‰ when the most polluted rivers are excluded. The sulfur isotope data, when combined with major anion and cation concentrations, allow us to tease apart the relative contributions of different processes to the modern riverine sulfur budget, resulting in new estimates of the flux of riverine sulfate due to the oxidative weathering of pyrites (1.3 ± 0.2 Tmol S/y) and the weathering of sedimentary sulfate minerals (1.5 ± 0.2 Tmol S/y). These data indicate that previous estimates of the global oxidative weathering of pyrite have been too low by a factor of two. As pyrite oxidation coupled to carbonate weathering can act as a source of CO2 to the atmosphere, this global pyrite weathering budget implies that the global CO2 weathering sink is overestimated. Furthermore, the large range of sulfur isotope ratios in modern rivers indicates that secular changes in the lithologies exposed to weathering through time could play a major role in driving past variations in the δ34S value of seawater.PostprintPostprintPostprintPeer reviewe

Characterization of Novel Paternal ncRNAs at the Plagl1 Locus, Including Hymai, Predicted to Interact with Regulators of Active Chromatin

Genomic imprinting is a complex epigenetic mechanism of transcriptional control that utilizes DNA methylation and histone modifications to bring about parent-of-origin specific monoallelic expression in mammals. Genes subject to imprinting are often organised in clusters associated with large non-coding RNAs (ncRNAs), some of which have cis-regulatory functions. Here we have undertaken a detailed allelic expression analysis of an imprinted domain on mouse proximal chromosome 10 comprising the paternally expressed Plagl1 gene. We identified three novel Plagl1 transcripts, only one of which contains protein-coding exons. In addition, we characterised two unspliced ncRNAs, Hymai, the mouse orthologue of HYMAI, and Plagl1it (Plagl1 intronic transcript), a transcript located in intron 5 of Plagl1. Imprinted expression of these novel ncRNAs requires DNMT3L-mediated maternal DNA methylation, which is also indispensable for establishing the correct chromatin profile at the Plagl1 DMR. Significantly, the two ncRNAs are retained in the nucleus, consistent with a potential regulatory function at the imprinted domain. Analysis with catRAPID, a protein-ncRNA association prediction algorithm, suggests that Hymai and Plagl1it RNAs both have potentially high affinity for Trithorax chromatin regulators. The two ncRNAs could therefore help to protect the paternal allele from DNA methylation by attracting Trithorax proteins that mediate H3 lysine-4 methylation

Meta-analysis of Genome-Wide Association Studies for Extraversion : Findings from the Genetics of Personality Consortium

Extraversion is a relatively stable and heritable personality trait associated with numerous psychosocial, lifestyle and health outcomes. Despite its substantial heritability, no genetic variants have been detected in previous genome-wide association (GWA) studies, which may be due to relatively small sample sizes of those studies. Here, we report on a large meta-analysis of GWA studies for extraversion in 63,030 subjects in 29 cohorts. Extraversion item data from multiple personality inventories were harmonized across inventories and cohorts. No genome-wide significant associations were found at the single nucleotide polymorphism (SNP) level but there was one significant hit at the gene level for a long non-coding RNA site (LOC101928162). Genome-wide complex trait analysis in two large cohorts showed that the additive variance explained by common SNPs was not significantly different from zero, but polygenic risk scores, weighted using linkage information, significantly predicted extraversion scores in an independent cohort. These results show that extraversion is a highly polygenic personality trait, with an architecture possibly different from other complex human traits, including other personality traits. Future studies are required to further determine which genetic variants, by what modes of gene action, constitute the heritable nature of extraversion.Peer reviewe

The Euchromatic and Heterochromatic Landscapes Are Shaped by Antagonizing Effects of Transcription on H2A.Z Deposition

A role for variant histone H2A.Z in gene expression is now well established but little is known about the mechanisms by which it operates. Using a combination of ChIP–chip, knockdown and expression profiling experiments, we show that upon gene induction, human H2A.Z associates with gene promoters and helps in recruiting the transcriptional machinery. Surprisingly, we also found that H2A.Z is randomly incorporated in the genome at low levels and that active transcription antagonizes this incorporation in transcribed regions. After cessation of transcription, random H2A.Z quickly reappears on genes, demonstrating that this incorporation utilizes an active mechanism. Within facultative heterochromatin, we observe a hyper accumulation of the variant histone, which might be due to the lack of transcription in these regions. These results show how chromatin structure and transcription can antagonize each other, therefore shaping chromatin and controlling gene expression