152 research outputs found
Optical Image Encryption Using Devil’s Vortex Toroidal Lens in the Fresnel Transform Domain
We have carried out a study of optical image encryption in the Fresnel transform (FrT) domain, using a random phase mask (RPM) in the input plane and a phase mask based on devil’s vortex toroidal lens (DVTL) in the frequency plane. The original images are recovered from their corresponding encrypted images by using the correct parameters of the FrT and the parameters of DVTL. The use of a DVTL-based structured mask enhances security by increasing the key space for encryption and also aids in overcoming the problem of axis alignment associated with an optical setup. The proposed encryption scheme is a lensless optical system and its digital implementation has been performed using MATLAB 7.6.0 (R2008a). The scheme has been validated for a grayscale and a binary image. The efficacy of the proposed scheme is verified by computing mean-squared-error (MSE) between the recovered and the original images. We have also investigated the scheme’s sensitivity to the encryption parameters and examined its robustness against occlusion and noise attacks
Traumatic Dental Injuries Among 12-15-Year-Old-School Children in Panchkula
Background:: Traumatic dental injury (TDI) in children and adolescents has become one of the most serious dental public health problems. Despite such a high prevalence of dental trauma, very less attention has been paid to TDI, its etiology, and prevention.
Objectives:: To determine the prevalence of anterior tooth traumatic dental injuries in 12-15-year-old school children of Panchkula district, India, and to find any correlation with the cause, gender, extent of overbite as well as over-jet, and previous treatment.
Patients and Methods:: A multistage sample of 12-15-year-old school children (n = 810) in Panchkula district, Haryana, was selected. The children were screened using WHO criteria for oral examination and a trained dental surgeon examined the children. Those with clinical TDI were examined further for the type of traumatic injuries using Elis classification modified by Holland. Overjet and overbite were recorded. After examination, questions regarding the cause of trauma and its treatment were asked. Data were subjected to statistical analysis using the Chi square and Mantel-Haenszel tests by SPSS version 20.0.
Results:: The results showed that out of 810 children, 86 (10.2 %) had TDI. Males had higher prevalence of trauma than females (P < 0.05). The common cause of trauma was fall (51.11%) followed by sports injuries (41.86%). Enamel-dentin fracture without pulpal involvement was the most common type of trauma and the most frequent involved teeth were maxillary central incisors. A significant association was observed between overjet and overbite and trauma. Only 3.5% of the children affected with trauma had received treatment.
Conclusions:: The prevalence of traumatic injuries to permanent incisors in 12-15-year-old Panchkula school children was relatively high. TDI was associated with gender, overjet, and lip competence. There was a great unmet treatment need
Epitaxial Self-Assembly of Interfaces of 2D Metal–Organic Frameworks for Electroanalytical Detection of Neurotransmitters
This paper identifies the electrochemical properties of individual facets of anisotropic layered conductive metal–organic frameworks (MOFs) based on M3(2,3,6,7,10,11-hexahydroxytriphenylene)2 (M3(HHTP)2) (M = Co, Ni). The electroanalytical advantages of each facet are then applied toward the electrochemical detection of neurochemicals. By employing epitaxially controlled deposition of M3(HHTP)2 MOFs on electrodes, the contribution of the basal plane ({001} facets) and edge sites ({100} facets) of these MOFs can be individually determined using electrochemical characterization techniques. Despite having a lower observed heterogeneous electron transfer rate constant, the {001} facets of the M3(HHTP)2 systems prove more selective and sensitive for the detection of dopamine than the {100} facets of the same MOF, with the limit of detection (LOD) of 9.9 ± 2 nM in phosphate-buffered saline and 214 ± 48 nM in a simulated cerebrospinal fluid. Langmuir isotherm studies accompanied by all-atom MD simulations suggested that the observed improvement in performance and selectivity is related to the adsorption characteristics of analytes on the basal plane versus edge sites of the MOF interfaces. This work establishes that the distinct crystallographic facets of 2D MOFs can be used to control the fundamental interactions between analyte and electrode, leading to tunable electrochemical properties by controlling their preferential orientation through self-assembly
Climate change effects on pest spectrum and incidence in grain legumes
Global warming and climate change will influence activity, diversity, distribution and population dynamics of insect pests including the grain legumes. Several insect pests damage grain legume crops, of which the pod borer, Helicoverpa armigera; spotted pod borer, Maruca vitrata; spiny pod borer, Etiella zinckenella; pod fly, Melanagromyza obtusa; aphid, Aphis craccivora; defoliators, Spodoptera litura and S. exigua; thrips, Megaleurothrips usitatus and Caliothrips indicus and the bruchid, Callasobruchus chinensis cause extensive losses in grain legumes. The incidence and extent of losses due to these pests varies across seasons, locations, and cropping systems. The pest spectrum on grain legumes will change considerably due to impending global warming and climate change. The geographical distribution of some of the pests might extend to temperate regions in Europe and America, while the outbreaks of some other pests will become more frequent. Several outbreaks of pod borer, H. armigera and spotted pod borer, M. vitrata have been recorded on grain legumes in India, which at times have resulted in complete crop loss. The scale insect, Ceroplastodes cajani in pigeonpea and beet armyworm, Spodoptera exigua, mealy bug, Ferrisia virgata, and white fly, Bemisia tabaci in chickpea have emerged as new pests; while leaf miner, Porphyrosela neodoxa, mealy bugs, Drepanococcus cajani, and Coccidohystrix insolita are some of the emerging pest problems in pigeonpea in India. In addition, there will be greater genotype x environment interactions for expression of resistance to insect pests, and this warrants a greater effort for identification of diverse sources of resistance and need for integrated pest management packages that will be effective under global warming and climate change
The potential of entomopathogens in biological control of white grubs
White grubs are highly polyphagous and most destructive soil pests inflicting damage to a wide variety of crops. In India, more than 1000 species of white grubs are known of which over 40 species attack wide range of plants. White grubs are naturally infected by various entomopathogens which include fungi, bacteria and nematodes. Entomopathogenic fungi offer great potential and members of genera Beauveria and Metarhizium are widely used against white grubs. Several commercial products of entomopathogenic fungi like Bio Green, ORY-X, Grub X 10G, Betel, Biotrol FMA and Meta-Guard have been developed for the control of white grubs. In India, good control of white grubs in paddy, ginger and sugarcane has been achieved with different entomofungi. Among EPNs, Heterorhabditis bacteriophora is moderately effective against Popillia japonica and Rhizotrogus majalis. H. indica and H. bacteriophora are effective against potato white grubs in India. Paenibacillus popilliae cause milky disease in P. japonica grubs. The bacterium is pathogenic to Holotrichia consanguinea, H. serrata and Leucopholis lepidophora. In north-western Himalaya, B. cereus is highly toxic to the grubs of H. seticollis and Anomala dimidiata
Молекулярный фенотип клеток крови, ассоциированный с прогрессированием трижды негативного рака молочной железы
Introduction. triple negative breast cancer is an aggressive clinical phenotype characterized by poor prognosis. immune system plays an important role in the development, treatment response, and progression of solid tumor. The search for immune-related markers associated with the prediction of treatment efficacy and disease prognosis, and based on the use of high-resolution molecular techniques, is a promising area of research, the results of which can be translated into clinical practice. Case description. The molecular profile of blood mononuclear cells in a 48-year-old female patient with histologically proven triple negative breast cancer (estrogen Receptor – 0; progesteron Receptor – 0; Her2/neu – 0; gata-3 – 0, androgen Receptor – 0 and Ki67 – 70 %) was described. The patient did not response to neoadjuvant chemotherapy with 4 cycles of paclitaxel + carboplatin followed by 2 cycles of adriamycin + cyclophosphamide. The patient underwent surgery. disease progression (pelvic bone metastases) occurred 2 months after surgery. The features of blood lymphocytes and monocytes associated with a lack of response to neoadjuvant chemotherapy and disease progression were described.Conclusion. This clinical case demonstrates that sequencing of peripheral blood mononuclear cells can be used as a method for identifying predictive markers of therapy efficacy and developing personalized treatments for patients with triple negative breast cancer.Актуальность. Трижды негативный подтип рака молочной железы характеризуется агрессивным течением и неблагоприятным прогнозом. Компоненты иммунной системы как непосредственные участники патогенеза играют роль в развитии, ответе на терапию и прогрессировании этой нозологии. Поиск маркеров иммунных клеток, ассоциированных с предсказанием эффективности лечения и прогнозом заболевания, основанный на применении молекулярных методов высокого разрешения, является перспективным направлением поискового исследования, результаты которого можно транслировать в клиническую практику. Описание клинического случая. Представлен первый опыт описания молекулярного профиля мононуклеарных клеток крови пациентки с трижды негативным раком молочной железы. Опухоль: инвазивная карцинома неспецифического типа с экспрессией: estrogen Receptor – 0; progesteron Receptor – 0; Her2/neu – 0; gata-3 – 0, androgen Receptor – 0, Ki67 – 70 % опухолевых клеток. Отмечено отсутствие ответа на неоадъювантную химиотерапию по схеме: 4 цикла «паклитаксел + + карбоплатин», с последующими 2 курсами АС (адриамицин + циклофосфан). Пациентке проведено оперативное лечение, через 2 мес после которого выявлены метастазы в кости таза. У пациентки описаны особенности лимфоцитов и моноцитов крови, которые могут быть ассоциированы с отсутствием ответа на неоадъювантную химиотерапию и прогрессированием заболевания.Заключение. Представленное клиническое наблюдение показывает, что метод секвенирования мононуклеарных клеток периферической крови можно использовать в качестве поискового для обнаружения предиктивных маркеров эффективности терапии и создания персонифицированной системы лечения пациенток с трижды негативным раком молочной железы
Influence of air temperature on drying kinetics and antioxidant potential of olive pomace
This work aims to evaluate the influence of olive pomace drying (a solid by-product of the olive oil industry)
on both antioxidant potential and drying kinetics. The two main fractions of olive pomace (pits, PI
and pulps + peels, P + P) were characterized by image analysis and density measurement. The drying process
was analyzed in experiments carried out at different temperatures (from 50 to 150 C) and mathematically
described from the diffusion and Weibull models. The antioxidant potential of the extracts
(ethanol water 80:20 v/v, 22 ± 1 C, 170 rpm for 24 h) obtained from the dry product was analyzed by
measuring the total phenolic content and antioxidant capacity and the main polyphenols were quantified
by HPLC DAD/MS MS.
The drying behavior of olive pomace was well described by considering the diffusion in the PI and P + P
fractions separately and the influence of temperature on effective moisture diffusivities was quantified by
an Arrhenius type equation. The antioxidant potential was only mildly influenced by the drying temperature.
However, long drying times at the highest temperature tested (150 C) significantly (p < 0.05)
increased the antioxidant potentialThe authors acknowledge the Generalitat Valenciana (PROMETEO/2010/062 and PROMETEO/2012/007) and Ministerio de Economia y Competitividad (AGL2011-29857-C03-04) for their financial support and the Ministerio de Educacion, Cultura y Deporte of Spain for the financing through the Formacion de Profesorado Universitario del Programa Nacional de Formacion de Recursos Humanos de Investigacion.Ahmad-Qasem Mateo, MH.; Barrajón Catalán, E.; Micol, V.; Cárcel Carrión, JA.; García Pérez, JV. (2013). Influence of air temperature on drying kinetics and antioxidant potential of olive pomace. Journal of Food Engineering. 119(3):516-524. https://doi.org/10.1016/j.jfoodeng.2013.06.027S516524119
Exploring the Conformational Transitions of Biomolecular Systems Using a Simple Two-State Anisotropic Network Model
Biomolecular conformational transitions are essential to biological functions. Most experimental methods report on the long-lived functional states of biomolecules, but information about the transition pathways between these stable states is generally scarce. Such transitions involve short-lived conformational states that are difficult to detect experimentally. For this reason, computational methods are needed to produce plausible hypothetical transition pathways that can then be probed experimentally. Here we propose a simple and computationally efficient method, called ANMPathway, for constructing a physically reasonable pathway between two endpoints of a conformational transition. We adopt a coarse-grained representation of the protein and construct a two-state potential by combining two elastic network models (ENMs) representative of the experimental structures resolved for the endpoints. The two-state potential has a cusp hypersurface in the configuration space where the energies from both the ENMs are equal. We first search for the minimum energy structure on the cusp hypersurface and then treat it as the transition state. The continuous pathway is subsequently constructed by following the steepest descent energy minimization trajectories starting from the transition state on each side of the cusp hypersurface. Application to several systems of broad biological interest such as adenylate kinase, ATP-driven calcium pump SERCA, leucine transporter and glutamate transporter shows that ANMPathway yields results in good agreement with those from other similar methods and with data obtained from all-atom molecular dynamics simulations, in support of the utility of this simple and efficient approach. Notably the method provides experimentally testable predictions, including the formation of non-native contacts during the transition which we were able to detect in two of the systems we studied. An open-access web server has been created to deliver ANMPathway results. © 2014 Das et al
Reference Gene Selection for Quantitative Real-time PCR Normalization in Quercus suber
The use of reverse transcription quantitative PCR technology to assess gene expression levels requires an accurate normalization of data in order to avoid misinterpretation of experimental results and erroneous analyses. Despite being the focus of several transcriptomics projects, oaks, and particularly cork oak (Quercus suber), have not been investigated regarding the identification of reference genes suitable for the normalization of real-time quantitative PCR data. In this study, ten candidate reference genes (Act, CACs, EF-1α, GAPDH, His3, PsaH, Sand, PP2A, ß-Tub and Ubq) were evaluated to determine the most stable internal reference for quantitative PCR normalization in cork oak. The transcript abundance of these genes was analysed in several tissues of cork oak, including leaves, reproduction cork, and periderm from branches at different developmental stages (1-, 2-, and 3-year old) or collected in different dates (active growth period versus dormancy). The three statistical methods (geNorm, NormFinder, and CV method) used in the evaluation of the most suitable combination of reference genes identified Act and CACs as the most stable candidates when all the samples were analysed together, while ß-Tub and PsaH showed the lowest expression stability. However, when different tissues, developmental stages, and collection dates were analysed separately, the reference genes exhibited some variation in their expression levels. In this study, and for the first time, we have identified and validated reference genes in cork oak that can be used for quantification of target gene expression in different tissues and experimental conditions and will be useful as a starting point for gene expression studies in other oaks
Substrate binding and translocation of the serotonin transporter studied by docking and molecular dynamics simulations
The serotonin (5-HT) transporter (SERT) plays an important role in the termination of 5-HT-mediated neurotransmission by transporting 5-HT away from the synaptic cleft and into the presynaptic neuron. In addition, SERT is the main target for antidepressant drugs, including the selective serotonin reuptake inhibitors (SSRIs). The three-dimensional (3D) structure of SERT has not yet been determined, and little is known about the molecular mechanisms of substrate binding and transport, though such information is very important for the development of new antidepressant drugs. In this study, a homology model of SERT was constructed based on the 3D structure of a prokaryotic homologous leucine transporter (LeuT) (PDB id: 2A65). Eleven tryptamine derivates (including 5-HT) and the SSRI (S)-citalopram were docked into the putative substrate binding site, and two possible binding modes of the ligands were found. To study the conformational effect that ligand binding may have on SERT, two SERT–5-HT and two SERT–(S)-citalopram complexes, as well as the SERT apo structure, were embedded in POPC lipid bilayers and comparative molecular dynamics (MD) simulations were performed. Our results show that 5-HT in the SERT–5-HTB complex induced larger conformational changes in the cytoplasmic parts of the transmembrane helices of SERT than any of the other ligands. Based on these results, we suggest that the formation and breakage of ionic interactions with amino acids in transmembrane helices 6 and 8 and intracellular loop 1 may be of importance for substrate translocation
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