Environmental risk assessment in the mediterranean region using artificial neural networks

Los mapas auto-organizados han demostrado ser una herramienta apropiada para la clasificación y visualización de grupos de datos complejos. Redes neuronales, como los mapas auto-organizados (SOM) o las redes difusas ARTMAP (FAM), se utilizan en este estudio para evaluar el impacto medioambiental acumulativo en diferentes medios (aguas subterráneas, aire y salud humana). Los SOMs también se utilizan para generar mapas de concentraciones de contaminantes en aguas subterráneas simulando las técnicas geostadísticas de interpolación como kriging y cokriging. Para evaluar la confiabilidad de las metodologías desarrolladas en esta tesis, se utilizan procedimientos de referencia como puntos de comparación: la metodología DRASTIC para el estudio de vulnerabilidad en aguas subterráneas y el método de interpolación espacio-temporal conocido como Bayesian Maximum Entropy (BME) para el análisis de calidad del aire. Esta tesis contribuye a demostrar las capacidades de las redes neuronales en el desarrollo de nuevas metodologías y modelos que explícitamente permiten evaluar las dimensiones temporales y espaciales de riesgos acumulativos

Modeling of soil weathering on hillslopes : coping with nonlinearity and coupled processes using a data-driven approach

Orientadores: Carlos Roberto de Souza Filho, Michael James FriedelTese (doutorado) - Universidade Estadual de Campinas, Instituto de GeociênciasResumo: Esta tese de doutorado tem como objetivo aprofundar o conhecimento sobre as relações das propriedades físico-quimicas do solo com a morfometria do relevo, buscando quantificar essas relações para a construção de modelos conceituais e preditivos. Mapas auto-organizáveis e modelos de sistemas de informação geográfica foram utilizados para investigar as relações não lineares associadas ao intemperismo químico e físico, fatores associados a fenômenos hidrológicos e à evolução dos solos. Três estudos de caso são apresentados: o intemperismo químico de solo no estado do Paraná (22 variáveis e 304 amostras), o transporte físico de sedimentos em Poços de Caldas (9 variáveis e 29 amostras), e hidroquímica de aqüíferos na Formação Serra Geral no Estado do Paraná (27 variáveis e 976 amostras). O método combinando simulação estocástica e mineração de dados permitiu explorar as relações entre relevo, granulometria e geoquímica dos solos. Regiões mais elevadas e com morfometria convexa apresentaram alta denudação de elementos móveis (e.g., Ca) e baixa de elementos pouco móveis (e.g., Al). O mesmo padrão foi observado para granulometria de solos, ou seja, alta proporção de areia em áreas altas e convexas da bacia e altos teores de argila, com baixa condutividade hidráulica, em regiões convexas próximas aos canais de drenagem. O comportamento espacial da hidroquímica das águas do aqüífero Serra Geral apontou áreas de potencial conectividade entre aqüíferos, áreas de recarga recente e de alto tempo de residência. Foram construídos modelos preditivos não tendenciosos das propriedades do solo em subsuperfície partindo da premissa de que o intemperismo e a morfometria se relacionam através de um processo duplamente dependente, onde a denudação física e química atua no delineamento do relevo e a morfometria do terreno é um fator que caracteriza as condições físico-químicas do soloAbstract: This Doctoral thesis aims to explore the relationship between soil physical-chemical properties and relief morphometry, and quantifying these relationships to build conceptual and predictive models. Self-organizing maps and Geographic Information Systems modeling are here used to investigate nonlinear correlations associated with chemical and physical denudation; which are factors connected with hydrological phenomena and soil evolution. Three study cases are presented: soil chemical weathering within the limits of the Parana State, southern Brazil (22 variables and 304 samples), physical transport of sediments in the alkaline intrusive complex of Poços de Caldas, southeastern Brazil (9 variables and 29 samples), and hydrochemistry of Serra Geral aquifers also in the Parana State (27 variables and 976 samples). The method combining stochastic simulation and data mining allows exploring the relationships between topography, soil texture and soil geochemistry. In the Parana State, higher regions and areas with convex morphometry shows, respectively, higher and lower denudation rates of mobile (e.g., Ca) and less mobile (e.g., Al) elements. The same pattern is observed for soil particle size. In this case, high proportion of sand is found in highlands and convex areas inside the basin, and high clay content, with low hydraulic conductivity, occurs in convex regions, near drainage channels. The spatial behavior of the Serra Geral aquifer?s hydrochemistry pointed out to areas with potential connectivity with the Guarani aquifer system, recent recharge areas, and long-standing waters. Predictive, unbiased models are built for soil properties on the premise that weathering and morphology are related through a two-way dependent process, where the physical and chemical denudation delineates the elevations of the land surface, and terrain morphometry is a factor that characterizes the physical-chemical conditions of the soilDoutoradoGeologia e Recursos NaturaisDoutor em Ciência

Event-Driven Technologies for Reactive Motion Planning: Neuromorphic Stereo Vision and Robot Path Planning and Their Application on Parallel Hardware

Die Robotik wird immer mehr zu einem Schlüsselfaktor des technischen Aufschwungs. Trotz beeindruckender Fortschritte in den letzten Jahrzehnten, übertreffen Gehirne von Säugetieren in den Bereichen Sehen und Bewegungsplanung noch immer selbst die leistungsfähigsten Maschinen. Industrieroboter sind sehr schnell und präzise, aber ihre Planungsalgorithmen sind in hochdynamischen Umgebungen, wie sie für die Mensch-Roboter-Kollaboration (MRK) erforderlich sind, nicht leistungsfähig genug. Ohne schnelle und adaptive Bewegungsplanung kann sichere MRK nicht garantiert werden. Neuromorphe Technologien, einschließlich visueller Sensoren und Hardware-Chips, arbeiten asynchron und verarbeiten so raum-zeitliche Informationen sehr effizient. Insbesondere ereignisbasierte visuelle Sensoren sind konventionellen, synchronen Kameras bei vielen Anwendungen bereits überlegen. Daher haben ereignisbasierte Methoden ein großes Potenzial, schnellere und energieeffizientere Algorithmen zur Bewegungssteuerung in der MRK zu ermöglichen. In dieser Arbeit wird ein Ansatz zur flexiblen reaktiven Bewegungssteuerung eines Roboterarms vorgestellt. Dabei wird die Exterozeption durch ereignisbasiertes Stereosehen erreicht und die Pfadplanung ist in einer neuronalen Repräsentation des Konfigurationsraums implementiert. Die Multiview-3D-Rekonstruktion wird durch eine qualitative Analyse in Simulation evaluiert und auf ein Stereo-System ereignisbasierter Kameras übertragen. Zur Evaluierung der reaktiven kollisionsfreien Online-Planung wird ein Demonstrator mit einem industriellen Roboter genutzt. Dieser wird auch für eine vergleichende Studie zu sample-basierten Planern verwendet. Ergänzt wird dies durch einen Benchmark von parallelen Hardwarelösungen wozu als Testszenario Bahnplanung in der Robotik gewählt wurde. Die Ergebnisse zeigen, dass die vorgeschlagenen neuronalen Lösungen einen effektiven Weg zur Realisierung einer Robotersteuerung für dynamische Szenarien darstellen. Diese Arbeit schafft eine Grundlage für neuronale Lösungen bei adaptiven Fertigungsprozesse, auch in Zusammenarbeit mit dem Menschen, ohne Einbußen bei Geschwindigkeit und Sicherheit. Damit ebnet sie den Weg für die Integration von dem Gehirn nachempfundener Hardware und Algorithmen in die Industrierobotik und MRK

Experimental time-domain controlled source electromagnetic induction for highly conductive targets detection and discrimination

The response of geological materials at the scale of meters and the response of buried targets of different shapes and sizes using controlled-source electromagnetic induction (CSEM) is investigated. This dissertation focuses on three topics; i) frac- tal properties on electric conductivity data from near-surface geology and processing techniques for enhancing man-made target responses, ii) non-linear inversion of spa- tiotemporal data using continuation method, and iii) classification of CSEM transient and spatiotemporal data. In the first topic, apparent conductivity profiles and maps were studied to de- termine self-affine properties of the geological noise and the effects of man-made con- ductive metal targets. 2-D Fourier transform and omnidirectional variograms showed that variations in apparent conductivity exhibit self-affinity, corresponding to frac- tional Brownian motion. Self-affinity no longer holds when targets are buried in the near-surface, making feasible the use of spectral methods to determine their pres- ence. The difference between the geology and target responses can be exploited using wavelet decomposition. A series of experiments showed that wavelet filtering is able to separate target responses from the geological background. In the second topic, a continuation-based inversion method approach is adopted, based on path-tracking in model space, to solve the non-linear least squares prob- lem for unexploded ordnance (UXO) data. The model corresponds to a stretched- exponential decay of eddy currents induced in a magnetic spheroid. The fast inversion of actual field multi-receiver CSEM responses of inert, buried ordnance is also shown. Software based on the continuation method could be installed within a multi-receiver CSEM sensor and used for near-real-time UXO decision. In the third topic, unsupervised self-organizing maps (SOM) were adapted for data clustering and classification. The use of self-organizing maps (SOM) for central- loop CSEM transients shows potential capability to perform classification, discrimi- nating background and non-dangerous items (clutter) data from, for instance, unex- ploded ordnance. Implementation of a merge SOM algorithm showed that clustering and classification of spatiotemporal CSEM data is possible. The ability to extract tar- get signals from a background-contaminated pattern is desired to avoid dealing with forward models containing subsurface response or to implement processing algorithm to remove, to some degree, the effects of background response and the target-host interactions

Exploratory data analysis using self-organising maps defined in up to three dimensions

The SOM is an artificial neural network based on an unsupervised learning process that performs a nonlinear mapping of high dimensional input data onto an ordered and structured array of nodes, designated as the SOM output space. Being simultaneously a quantization algorithm and a projection algorithm, the SOM is able to summarize and map the data, allowing its visualization. Because using the most common visualization methods it is very difficult or even impossible to visualize the SOM defined with more than two dimensions, the SOM output space is generally a regular two dimensional grid of nodes. However, there are no theoretical problems in generating SOMs with higher dimensional output spaces. In this thesis we present evidence that the SOM output space defined in up to three dimensions can be used successfully for the exploratory analysis of spatial data, two-way data and three-way data. Although the differences between the methods that are proposed to visualize each group of data, the approach adopted is commonly based in the projection of colour codes, which are obtained from the output space of 3D SOMs, in some specific bi-dimensional surface, where data can be represented according to its own characteristics. This approach is, in some cases, also complemented with the simultaneous use of SOMs defined in one and two dimensions, so that patterns in data can be properly revealed. The results obtained by using this visualization strategy indicates not only the benefits of using the SOM defined in up to three dimensions but also shows the relevance of the combined and simultaneous use of different models of the SOM in exploratory data analysis

Beta hebbian learning: definition and analysis of a new family of learning rules for exploratory projection pursuit

[EN] This thesis comprises an investigation into the derivation of learning rules in artificial neural networks from probabilistic criteria. •Beta Hebbian Learning (BHL). First of all, it is derived a new family of learning rules which are based on maximising the likelihood of the residual from a negative feedback network when such residual is deemed to come from the Beta Distribution, obtaining an algorithm called Beta Hebbian Learning, which outperforms current neural algorithms in Exploratory Projection Pursuit. • Beta-Scale Invariant Map (Beta-SIM). Secondly, Beta Hebbian Learning is applied to a well-known Topology Preserving Map algorithm called Scale Invariant Map (SIM) to design a new of its version called Beta-Scale Invariant Map (Beta-SIM). It is developed to facilitate the clustering and visualization of the internal structure of high dimensional complex datasets effectively and efficiently, specially those characterized by having internal radial distribution. The Beta-SIM behaviour is thoroughly analysed comparing its results, in terms performance quality measures with other well-known topology preserving models. • Weighted Voting Superposition Beta-Scale Invariant Map (WeVoS-Beta-SIM). Finally, the use of ensembles such as the Weighted Voting Superposition (WeVoS) is tested over the previous novel Beta-SIM algorithm, in order to improve its stability and to generate accurate topology maps when using complex datasets. Therefore, the WeVoS-Beta-Scale Invariant Map (WeVoS-Beta-SIM), is presented, analysed and compared with other well-known topology preserving models. All algorithms have been successfully tested using different artificial datasets to corroborate their properties and also with high-complex real datasets.[ES] Esta tesis abarca la investigación sobre la derivación de reglas de aprendizaje en redes neuronales artificiales a partir de criterios probabilísticos. • Beta Hebbian Learning (BHL). En primer lugar, se deriva una nueva familia de reglas de aprendizaje basadas en maximizar la probabilidad del residuo de una red con retroalimentación negativa cuando se considera que dicho residuo proviene de la Distribución Beta, obteniendo un algoritmo llamado Beta Hebbian Learning, que mejora a algoritmos neuronales actuales de búsqueda de proyecciones exploratorias. • Beta-Scale Invariant Map (Beta-SIM). En Segundo lugar, Beta Hebbian Learning se aplica a un conocido algoritmo de Mapa de Preservación de la Topología llamado Scale Invariant Map (SIM) para diseñar una nueva versión llamada Beta-Scale Invariant Map (Beta-SIM). Este nuevo algoritmo ha sido desarrollado para facilitar el agrupamiento y visualización de la estructura interna de conjuntos de datos complejos de alta dimensionalidad de manera eficaz y eficiente, especialmente aquellos caracterizados por tener una distribución radial interna. El comportamiento de Beta-SIM es analizado en profundidad comparando sus resultados, en términos de medidas de calidad de rendimiento con otros modelos bien conocidos de preservación de topología. • Weighted Voting Superposition Beta-Scale Invariant Map (WeVoS-Beta-SIM). Finalmente, el uso de ensembles como el Weighted Voting Superposition (WeVoS) sobre el algoritmo Beta-SIM es probado, con objeto de mejorar su estabilidad y generar mapas topológicos precisos cuando se utilizan conjuntos de datos complejos. Por lo tanto, se presenta, analiza y compara el WeVoS-Beta-Scale Invariant Map (WeVoS-Beta-SIM) con otros modelos bien conocidos de preservación de topología. Todos los algoritmos han sido probados con éxito sobre conjuntos de datos artificiales para corroborar sus propiedades, así como con conjuntos de datos reales de gran complejidad

Development and Applications of Machine Learning Methods for Hyperspectral Data

Die hyperspektrale Fernerkundung der Erde stützt sich auf Daten passiver optischer Sensoren, die auf Plattformen wie Satelliten und unbemannten Luftfahrzeugen montiert sind. Hyperspektrale Daten umfassen Informationen zur Identifizierung von Materialien und zur Überwachung von Umweltvariablen wie Bodentextur, Bodenfeuchte, Chlorophyll a und Landbedeckung. Methoden zur Datenanalyse sind erforderlich, um Informationen aus hyperspektralen Daten zu erhalten. Ein leistungsstarkes Werkzeug bei der Analyse von Hyperspektraldaten ist das Maschinelle Lernen, eine Untergruppe von Künstlicher Intelligenz. Maschinelle Lernverfahren können nichtlineare Korrelationen lösen und sind bei steigenden Datenmengen skalierbar. Jeder Datensatz und jedes maschinelle Lernverfahren bringt neue Herausforderungen mit sich, die innovative Lösungen erfordern. Das Ziel dieser Arbeit ist die Entwicklung und Anwendung von maschinellen Lernverfahren auf hyperspektrale Fernerkundungsdaten. Im Rahmen dieser Arbeit werden Studien vorgestellt, die sich mit drei wesentlichen Herausforderungen befassen: (I) Datensätze, welche nur wenige Datenpunkte mit dazugehörigen Ausgabedaten enthalten, (II) das begrenzte Potential von nicht-tiefen maschinellen Lernverfahren auf hyperspektralen Daten und (III) Unterschiede zwischen den Verteilungen der Trainings- und Testdatensätzen. Die Studien zur Herausforderung (I) führen zur Entwicklung und Veröffentlichung eines Frameworks von Selbstorganisierten Karten (SOMs) für unüberwachtes, überwachtes und teilüberwachtes Lernen. Die SOM wird auf einen hyperspektralen Datensatz in der (teil-)überwachten Regression der Bodenfeuchte angewendet und übertrifft ein Standardverfahren des maschinellen Lernens. Das SOM-Framework zeigt eine angemessene Leistung in der (teil-)überwachten Klassifikation der Landbedeckung. Es bietet zusätzliche Visualisierungsmöglichkeiten, um das Verständnis des zugrunde liegenden Datensatzes zu verbessern. In den Studien, die sich mit Herausforderung (II) befassen, werden drei innovative eindimensionale Convolutional Neural Network (CNN) Architekturen entwickelt. Die CNNs werden für eine Bodentexturklassifikation auf einen frei verfügbaren hyperspektralen Datensatz angewendet. Ihre Leistung wird mit zwei bestehenden CNN-Ansätzen und einem Random Forest verglichen. Die beiden wichtigsten Erkenntnisse lassen sich wie folgt zusammenfassen: Erstens zeigen die CNN-Ansätze eine deutlich bessere Leistung als der angewandte nicht-tiefe Random Forest-Ansatz. Zweitens verbessert das Hinzufügen von Informationen über hyperspektrale Bandnummern zur Eingabeschicht eines CNNs die Leistung im Bezug auf die einzelnen Klassen. Die Studien über die Herausforderung (III) basieren auf einem Datensatz, der auf fünf verschiedenen Messgebieten in Peru im Jahr 2019 erfasst wurde. Die Unterschiede zwischen den Messgebieten werden mit qualitativen Methoden und mit unüberwachten maschinellen Lernverfahren, wie zum Beispiel Principal Component Analysis und Autoencoder, analysiert. Basierend auf den Ergebnissen wird eine überwachte Regression der Bodenfeuchte bei verschiedenen Kombinationen von Messgebieten durchgeführt. Zusätzlich wird der Datensatz mit Monte-Carlo-Methoden ergänzt, um die Auswirkungen der Verschiebung der Verteilungen des Datensatzes auf die Regression zu untersuchen. Der angewandte SOM-Regressor ist relativ robust gegenüber dem Rauschen des Bodenfeuchtesensors und zeigt eine gute Leistung bei kleinen Datensätzen, während der angewandte Random Forest auf dem gesamten Datensatz am besten funktioniert. Die Verschiebung der Verteilungen macht diese Regressionsaufgabe schwierig; einige Kombinationen von Messgebieten bilden einen deutlich sinnvolleren Trainingsdatensatz als andere. Insgesamt zeigen die vorgestellten Studien, die sich mit den drei größten Herausforderungen befassen, vielversprechende Ergebnisse. Die Arbeit gibt schließlich Hinweise darauf, wie die entwickelten maschinellen Lernverfahren in der zukünftigen Forschung weiter verbessert werden können

A computational model unifies apparently contradictory findings concerning phantom pain

Amputation often leads to painful phantom sensations, whose pathogenesis is still unclear. Supported by experimental findings, an explanatory model has been proposed that identifies maladaptive reorganization of the primary somatosensory cortex (S1) as a cause of phantom pain. However, it was recently found that BOLD activity during voluntary movements of the phantom positively correlates with phantom pain rating, giving rise to a model of persistent representation. In the present study, we develop a physiologically realistic, computational model to resolve the conflicting findings. Simulations yielded that both the amount of reorganization and the level of cortical activity during phantom movements were enhanced in a scenario with strong phantom pain as compared to a scenario with weak phantom pain. These results suggest that phantom pain, maladaptive reorganization, and persistent representation may all be caused by the same underlying mechanism, which is driven by an abnormally enhanced spontaneous activity of deafferented nociceptive channels

Self Organisation and Hierarchical Concept Representation in Networks of Spiking Neurons

The aim of this work is to introduce modular processing mechanisms for cortical functions implemented in networks of spiking neurons. Neural maps are a feature of cortical processing found to be generic throughout sensory cortical areas, and self-organisation to the fundamental properties of input spike trains has been shown to be an important property of cortical organisation. Additionally, oscillatory behaviour, temporal coding of information, and learning through spike timing dependent plasticity are all frequently observed in the cortex. The traditional self-organising map (SOM) algorithm attempts to capture the computational properties of this cortical self-organisation in a neural network. As such, a cognitive module for a spiking SOM using oscillations, phasic coding and STDP has been implemented. This model is capable of mapping to distributions of input data in a manner consistent with the traditional SOM algorithm, and of categorising generic input data sets. Higher-level cortical processing areas appear to feature a hierarchical category structure that is founded on a feature-based object representation. The spiking SOM model is therefore extended to facilitate input patterns in the form of sets of binary feature-object relations, such as those seen in the field of formal concept analysis. It is demonstrated that this extended model is capable of learning to represent the hierarchical conceptual structure of an input data set using the existing learning scheme. Furthermore, manipulations of network parameters allow the level of hierarchy used for either learning or recall to be adjusted, and the network is capable of learning comparable representations when trained with incomplete input patterns. Together these two modules provide related approaches to the generation of both topographic mapping and hierarchical representation of input spaces that can be potentially combined and used as the basis for advanced spiking neuron models of the learning of complex representations

Contextual contact tracing based spatio enhanced compartment modelling & spatial risk assessment

Dissertation submitted in partial fulfilment of the requirements for the Degree of Master of Science in Geospatial TechnologiesThe current situation of COVID-19 appears as a paradigm shift that seems to have farreaching impacts on the way humans will now continue with their daily routine. The overall scenario highlights the paramount importance of infectious disease surveillance, which necessitates immediate monitoring for effective preparedness and efficient response. Policymakers are interested in data insights identifying high-risk areas as well as individuals to be quarantined, especially as the public gets back to their normal routine. This thesis research investigates both requirements in a hybrid approach by the implementation of disease outbreak modelling and exploring its induced dynamic spatial risk in the form of Risk Assessment, along with its real-time integration back into the disease model. The study implements human mobility based contact tracing in the form of an event-based stochastic SIR model as a baseline and further modifies the existing setup to be inclusive of the spatial risk. This modification of each individual-level contact’s intensity to be dependent on its spatial location has been termed as Contextual Contact Tracing. The results suggest that the Spatio-SIR model tends to perform more meaningful events concerned with the Susceptible population rather than events to the Infected or Quarantined. With an example of a real-world scenario of induced spatial high-risk, it is highlighted that the new Spatio-SIR model can empower the analyst with a capability to explore disease dynamics from an additional perspective. The study concludes that even if this domain is hindered due to lack of data availability, the investigation process related to it should keep on exploring methods to effectively understand the disease dynamics