Distributed k-core view materialization and maintenance for large dynamic graphs

Cataloged from PDF version of article.In graph theory, k-core is a key metric used to identify subgraphs of high cohesion, also known as the ‘dense’ regions of a graph. As the real world graphs such as social network graphs grow in size, the contents get richer and the topologies change dynamically, we are challenged not only to materialize k-core subgraphs for one time but also to maintain them in order to keep up with continuous updates. Adding to the challenge is that real world data sets are outgrowing the capacity of a single server and its main memory. These challenges inspired us to propose a new set of distributed algorithms for k-core view construction and maintenance on a horizontally scaling storage and computing platform. Our algorithms execute against the partitioned graph data in parallel and take advantage of k-core properties to aggressively prune unnecessary computation. Experimental evaluation results demonstrated orders of magnitude speedup and advantages of maintaining k-core incrementally and in batch windows over complete reconstruction. Our algorithms thus enable practitioners to create and maintain many k-core views on different topics in rich social network content simultaneously

A network-aware framework for energy-efficient data acquisition in wireless sensor networks

Wireless sensor networks enable users to monitor the physical world at an extremely high fidelity. In order to collect the data generated by these tiny-scale devices, the data management community has proposed the utilization of declarative data-acquisition frameworks. While these frameworks have facilitated the energy-efficient retrieval of data from the physical environment, they were agnostic of the underlying network topology and also did not support advanced query processing semantics. In this paper we present KSpot+, a distributed network-aware framework that optimizes network efficiency by combining three components: (i) the tree balancing module, which balances the workload of each sensor node by constructing efficient network topologies; (ii) the workload balancing module, which minimizes data reception inefficiencies by synchronizing the sensor network activity intervals; and (iii) the query processing module, which supports advanced query processing semantics. In order to validate the efficiency of our approach, we have developed a prototype implementation of KSpot+ in nesC and JAVA. In our experimental evaluation, we thoroughly assess the performance of KSpot+ using real datasets and show that KSpot+ provides significant energy reductions under a variety of conditions, thus significantly prolonging the longevity of a WSN

GraphX: Unifying Data-Parallel and Graph-Parallel Analytics

From social networks to language modeling, the growing scale and importance of graph data has driven the development of numerous new graph-parallel systems (e.g., Pregel, GraphLab). By restricting the computation that can be expressed and introducing new techniques to partition and distribute the graph, these systems can efficiently execute iterative graph algorithms orders of magnitude faster than more general data-parallel systems. However, the same restrictions that enable the performance gains also make it difficult to express many of the important stages in a typical graph-analytics pipeline: constructing the graph, modifying its structure, or expressing computation that spans multiple graphs. As a consequence, existing graph analytics pipelines compose graph-parallel and data-parallel systems using external storage systems, leading to extensive data movement and complicated programming model. To address these challenges we introduce GraphX, a distributed graph computation framework that unifies graph-parallel and data-parallel computation. GraphX provides a small, core set of graph-parallel operators expressive enough to implement the Pregel and PowerGraph abstractions, yet simple enough to be cast in relational algebra. GraphX uses a collection of query optimization techniques such as automatic join rewrites to efficiently implement these graph-parallel operators. We evaluate GraphX on real-world graphs and workloads and demonstrate that GraphX achieves comparable performance as specialized graph computation systems, while outperforming them in end-to-end graph pipelines. Moreover, GraphX achieves a balance between expressiveness, performance, and ease of use

A comparison of statistical machine learning methods in heartbeat detection and classification

In health care, patients with heart problems require quick responsiveness in a clinical setting or in the operating theatre. Towards that end, automated classification of heartbeats is vital as some heartbeat irregularities are time consuming to detect. Therefore, analysis of electro-cardiogram (ECG) signals is an active area of research. The methods proposed in the literature depend on the structure of a heartbeat cycle. In this paper, we use interval and amplitude based features together with a few samples from the ECG signal as a feature vector. We studied a variety of classification algorithms focused especially on a type of arrhythmia known as the ventricular ectopic fibrillation (VEB). We compare the performance of the classifiers against algorithms proposed in the literature and make recommendations regarding features, sampling rate, and choice of the classifier to apply in a real-time clinical setting. The extensive study is based on the MIT-BIH arrhythmia database. Our main contribution is the evaluation of existing classifiers over a range sampling rates, recommendation of a detection methodology to employ in a practical setting, and extend the notion of a mixture of experts to a larger class of algorithms

Content warehouses

Nowadays, content management systems are an established technology. Based on the experiences from several application scenarios we discuss the points of contact between content management systems and other disciplines of information systems engineering like data warehouses, data mining, and data integration. We derive a system architecture called "content warehouse" that integrates these technologies and defines a more general and more sophisticated view on content management. As an example, a system for the collection, maintenance, and evaluation of biological content like survey data or multimedia resources is shown as a case study

Data Mining the SDSS SkyServer Database

An earlier paper (Szalay et. al. "Designing and Mining MultiTerabyte Astronomy Archives: The Sloan Digital Sky Survey," ACM SIGMOD 2000) described the Sloan Digital Sky Survey's (SDSS) data management needs by defining twenty database queries and twelve data visualization tasks that a good data management system should support. We built a database and interfaces to support both the query load and also a website for ad-hoc access. This paper reports on the database design, describes the data loading pipeline, and reports on the query implementation and performance. The queries typically translated to a single SQL statement. Most queries run in less than 20 seconds, allowing scientists to interactively explore the database. This paper is an in-depth tour of those queries. Readers should first have studied the companion overview paper Szalay et. al. "The SDSS SkyServer, Public Access to the Sloan Digital Sky Server Data" ACM SIGMOND 2002.Comment: 40 pages, Original source is at http://research.microsoft.com/~gray/Papers/MSR_TR_O2_01_20_queries.do

Formal design of data warehouse and OLAP systems : a dissertation presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Information Systems at Massey University, Palmerston North, New Zealand

A data warehouse is a single data store, where data from multiple data sources is integrated for online business analytical processing (OLAP) of an entire organisation. The rationale being single and integrated is to ensure a consistent view of the organisational business performance independent from different angels of business perspectives. Due to its wide coverage of subjects, data warehouse design is a highly complex, lengthy and error-prone process. Furthermore, the business analytical tasks change over time, which results in changes in the requirements for the OLAP systems. Thus, data warehouse and OLAP systems are rather dynamic and the design process is continuous. In this thesis, we propose a method that is integrated, formal and application-tailored to overcome the complexity problem, deal with the system dynamics, improve the quality of the system and the chance of success. Our method comprises three important parts: the general ASMs method with types, the application tailored design framework for data warehouse and OLAP, and the schema integration method with a set of provably correct refinement rules. By using the ASM method, we are able to model both data and operations in a uniform conceptual framework, which enables us to design an integrated approach for data warehouse and OLAP design. The freedom given by the ASM method allows us to model the system at an abstract level that is easy to understand for both users and designers. More specifically, the language allows us to use the terms from the user domain not biased by the terms used in computer systems. The pseudo-code like transition rules, which gives the simplest form of operational semantics in ASMs, give the closeness to programming languages for designers to understand. Furthermore, these rules are rooted in mathematics to assist in improving the quality of the system design. By extending the ASMs with types, the modelling language is tailored for data warehouse with the terms that are well developed for data-intensive applications, which makes it easy to model the schema evolution as refinements in the dynamic data warehouse design. By providing the application-tailored design framework, we break down the design complexity by business processes (also called subjects in data warehousing) and design concerns. By designing the data warehouse by subjects, our method resembles Kimball's "bottom-up" approach. However, with the schema integration method, our method resolves the stovepipe issue of the approach. By building up a data warehouse iteratively in an integrated framework, our method not only results in an integrated data warehouse, but also resolves the issues of complexity and delayed ROI (Return On Investment) in Inmon's "top-down" approach. By dealing with the user change requests in the same way as new subjects, and modelling data and operations explicitly in a three-tier architecture, namely the data sources, the data warehouse and the OLAP (online Analytical Processing), our method facilitates dynamic design with system integrity. By introducing a notion of refinement specific to schema evolution, namely schema refinement, for capturing the notion of schema dominance in schema integration, we are able to build a set of correctness-proven refinement rules. By providing the set of refinement rules, we simplify the designers's work in correctness design verification. Nevertheless, we do not aim for a complete set due to the fact that there are many different ways for schema integration, and neither a prescribed way of integration to allow designer favored design. Furthermore, given its °exibility in the process, our method can be extended for new emerging design issues easily