53,924 research outputs found

    The dynamics of replication licensing in live Caenorhabditis elegans embryos

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    Accurate DNA replication requires proper regulation of replication licensing, which entails loading MCM-2-7 onto replication origins. In this paper, we provide the first comprehensive view of replication licensing in vivo, using video microscopy of Caenorhabditis elegans embryos. As expected, MCM-2-7 loading in late M phase depended on the prereplicative complex (pre-RC) proteins: origin recognition complex (ORC), CDC-6, and CDT-1. However, many features we observed have not been described before: GFP-ORC-1 bound chromatin independently of ORC-2-5, and CDC-6 bound chromatin independently of ORC, whereas CDT-1 and MCM-2-7 DNA binding was interdependent. MCM-3 chromatin loading was irreversible, but CDC-6 and ORC turned over rapidly, consistent with ORC/CDC-6 loading multiple MCM-2-7 complexes. MCM-2-7 chromatin loading further reduced ORC and CDC-6 DNA binding. This dynamic behavior creates a feedback loop allowing ORC/CDC-6 to repeatedly load MCM-2-7 and distribute licensed origins along chromosomal DNA. During S phase, ORC and CDC-6 were excluded from nuclei, and DNA was overreplicated in export-defective cells. Thus, nucleocytoplasmic compartmentalization of licensing factors ensures that DNA replication occurs only once

    Oxidized (non)-regenerated cellulose affects fundamental cellular processes of wound healing.

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    In this study we investigated how hemostats such as oxidized regenerated cellulose (ORC, TABOTAMP) and oxidized non-regenerated cellulose (ONRC, RESORBA CELL) influence local cellular behavior and contraction of the extracellular matrix (ECM). Human stromal fibroblasts were inoculated in vitro with ORC and ONRC. Cell proliferation was assayed over time, and migration was evaluated by Live Cell imaging microscopy. Fibroblasts grown in collagen-gels were treated with ORC or ONRC, and ECM contraction was measured utilizing a contraction assay. An absolute pH decline was observed with both ORC and ONRC after 1 hour. Mean daily cell proliferation, migration and matrix contraction were more strongly inhibited by ONRC when compared with ORC (p < 0.05). When control media was pH-lowered to match the lower pH values typically seen with ORC and ONRC, significant differences in cell proliferation and migration were still observed between ONRC and ORC (p < 0.05). However, in these pH conditions, inhibition of matrix contraction was only significant for ONRC (p < 0.05). We find that ORC and ONRC inhibit fibroblast proliferation, migration and matrix contraction, and stronger inhibition of these essential cellular processes of wound healing were observed for ONRC when compared with ORC. These results will require further validation in future in vivo experiments to clarify the clinical implications for hemostat use in post-surgical wound healing

    A regenerative supercritical-subcritical dual-loop organic Rankine cycle system for energy recovery from the waste heat of internal combustion engines

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    Organic Rankine cycle (ORC) system is considered as a promising technology for energy recovery from the waste heat rejected by internal combustion (IC) engines. However, such waste heat is normally contained in both coolant and exhaust gases at quite different temperatures. A single ORC system is usually unable to efficiently recover energy from both of these waste heat sources. A dual loop ORC system which essentially has two cascaded ORCs to recover energy from the engine’s exhaust gases and coolant separately has been proposed to address this challenge. In this way, the overall efficiency of energy recovery can be substantially improved. This paper examines a regenerative dual loop ORC system using a pair of environmentally friendly refrigerants, R1233zd and R1234yf, as working fluids, to recover energy from the waste heat of a compressed natural gas (CNG) engine. Unlike most previous studies focusing on the ORC system only, the present research analyses the ORC system and CNG engine together as an integrated system. As such, the ORC system is analysed on the basis of real data of waste heat sources of the CNG engine under various operational conditions. A numerical model is employed to analyse the performances of the proposed dual loop cycle with four pairs of working fluids. The effects of a regenerative heat exchanger and several other key operating parameters are also analysed and discussed in detail. The performance of the integrated engine-ORC system is then analysed under actual engine operating conditions which were measured beforehand. The performance of the proposed system under off-design conditions has also been analysed. The obtained results show that the proposed dual loop ORC system could achieve better performance than other ORC systems for similar applications

    ORCSim: a generalized Organic Rankine cycle simulation tool

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    An increasing interest in organic Rankine cycle (ORC) technology has led to numerous simulation and optimization studies. In the open-literature different modeling approaches can be found, but general software tools available to the academic/industrial community are limited. A generalized ORC simulation tool, named ORCSim, is proposed in this paper. The framework is developed using object-oriented programming that easily allows improvements and future extensions. Currently two cycle configurations are implemented, i.e. a basic ORC and an ORC with liquid-flooded expansion. The software architecture, the thermo-physical property wrappers, the component library and the solution algorithm are discussed with particular emphasis on the ORC with liquid-flooded expansion. A thorough validation both at component and cycle levels is proposed by considering the aforementioned cycle architectures

    A dynamic organic Rankine cycle using a zeotropic mixture as the working fluid with composition tuning to match changing ambient conditions

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    Air-cooled condensers are widely used for Organic Rankine Cycle (ORC) power plants where cooling water is unavailable or too costly, but they are then vulnerable to changing ambient air temperatures especially in continental climates, where the air temperature difference between winter and summer can be over 40 °C. A conventional ORC system using a single component working fluid has to be designed according to the maximum air temperature in summer and thus operates far from optimal design conditions for most of the year, leading to low annual average efficiencies. This research proposes a novel dynamic ORC that uses a binary zeotropic mixture as the working fluid, with mechanisms in place to adjust the mixture composition dynamically during operation in response to changing heat sink conditions, significantly improving the overall efficiency of the plant. The working principle of the dynamic ORC concept is analysed. The case study results show that the annual average thermal efficiency can be improved by up to 23% over a conventional ORC when the heat source is 100 °C, while the evaluated increase of the capital cost is less than 7%. The dynamic ORC power plants are particularly attractive for low temperature applications, delivering shorter payback periods compared to conventional ORC systems

    Dynamic control strategy of a distillation system for a composition-adjustable organic Rankine cycle

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    Using zeotropic mixtures as working fluids can improve the thermal efficiency of Organic Rankine cycle (ORC) power plants for utilising geothermal energy. However, currently, such ORC systems cannot regulate the composition of zeotropic mixtures when their operating conditions change. A composition-adjustable ORC system could potentially improve the thermal efficiency by closely matching the cycle to the changing ambient conditions provided that the composition of the working fluid mixture can be adjusted in an economic way. In this paper, a dynamic composition control strategy has been proposed and analysed for such a composition-adjustable ORC system. This method employs a distillation column to separate the two components of the mixture, which can then be pumped back to the main ORC system to adjust the composition of the zeotropic mixture to the required level according to the ambient temperature. The dynamic composition control strategy is simulated using an optimisation algorithm. The design method of the distillation column is presented and its dynamic response characteristics have been analysed using Aspen Plus Dynamics. The results indicate that the average power output can be significantly improved using a composition-adjustable ORC system when the ambient temperature decreases. The size of the distillation system is relatively small and its energy (mainly thermal) consumption is only around 1 percent of the system’s input heat. The research results also show that the dynamic response characteristics of the distillation system can satisfy the requirements of the ORC system

    Cryo-EM structure of a helicase loading intermediate containing ORC-Cdc6-Cdt1-MCM2-7 bound to DNA

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    In eukaryotes, the Cdt1-bound replicative helicase core MCM2-7 is loaded onto DNA by the ORC-Cdc6 ATPase to form a prereplicative complex (pre-RC) with an MCM2-7 double hexamer encircling DNA. Using purified components in the presence of ATP-γS, we have captured in vitro an intermediate in pre-RC assembly that contains a complex between the ORC-Cdc6 and Cdt1-MCM2-7 heteroheptamers called the OCCM. Cryo-EM studies of this 14-subunit complex reveal that the two separate heptameric complexes are engaged extensively, with the ORC-Cdc6 N-terminal AAA+ domains latching onto the C-terminal AAA+ motor domains of the MCM2-7 hexamer. The conformation of ORC-Cdc6 undergoes a concerted change into a right-handed spiral with helical symmetry that is identical to that of the DNA double helix. The resulting ORC-Cdc6 helicase loader shows a notable structural similarity to the replication factor C clamp loader, suggesting a conserved mechanism of action

    Thermodynamic analysis of a dual-loop organic Rankine cycle (ORC) for waste heat recovery of a petrol engine

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    Huge amounts of low-grade heat energy are discharged to the environment by vehicular engines. Considering the large number of vehicles in the world, such waste energy has a great impact on our environment globally. The Organic Rankine Cycle (ORC), which uses an organic fluid with a low boiling point as the working medium, is considered to be the most promising technology to recover energy from low-grade waste heat. In this study, a dual-loop ORC is presented to simultaneously recover energy from both the exhaust gases and the coolant of a petrol engine. A high-temperature (HT) ORC loop is used to recover heat from the exhaust gases, while a low-temperature (LT) ORC loop is used to recover heat from the coolant and the condensation heat of the HT loop. Figure 1 shows the schematic of the dual-loop ORC. Differing from previous research, two more environmentally friendly working fluids are used, and the corresponding optimisation is conducted. First, the system structure and operating principle are described. Then, a mathematical model of the designed dual-loop ORC is established. Next, the performance of the dual-loop cycle is analysed over the entire engine operating region. Furthermore, the states of each point along the cycle and the heat load of each component are compared with the results of previous research. The results show that the dual-loop ORC can effectively recover the waste heat from the petrol engine, and that the effective thermal efficiency can be improved by about 20 ~ 24%, 14~20%, and 30% in the high-speed, medium-speed, and low-speed operation regions, respectively. The designed dual-loop ORC can achieve a higher system efficiency than previous ORCs of this structure. Therefore, it is a good choice for waste heat recovery from vehicle engines
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